RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 SNX33Q8WV41 574 aa17.58■□□□□ 0.41
HOXC4-201ENST00000303406 PHYHIPQ92561 330 aa17.58■□□□□ 0.41
HOXC4-201ENST00000303406 KCTD12Q96CX2 325 aaKnown RBP17.58■□□□□ 0.41
HOXC4-201ENST00000303406 SMIM19Q96E16 107 aa17.58■□□□□ 0.41
HOXC4-201ENST00000303406 PELI1Q96FA3 418 aa17.58■□□□□ 0.41
HOXC4-201ENST00000303406 MESP1Q9BRJ9 268 aa17.58■□□□□ 0.41
HOXC4-201ENST00000303406 MFRPQ9BY79 579 aa17.58■□□□□ 0.41
HOXC4-201ENST00000303406 MARCH7Q9H992 704 aa17.58■□□□□ 0.41
HOXC4-201ENST00000303406 RPRD1BQ9NQG5 326 aaKnown RBP17.58■□□□□ 0.41
HOXC4-201ENST00000303406 ZNF346Q9UL40 294 aaKnown RBP17.58■□□□□ 0.41
HOXC4-201ENST00000303406 PCDHGA5Q9Y5G8 931 aa17.58■□□□□ 0.41
HOXC4-201ENST00000303406 B3GALT1Q9Y5Z6 326 aa17.58■□□□□ 0.41
HOXC4-201ENST00000303406 MPDZO75970 2070 aa17.57■□□□□ 0.4
HOXC4-201ENST00000303406 GPRIN2O60269 458 aa17.57■□□□□ 0.4
HOXC4-201ENST00000303406 SELENOFO60613 162 aa17.57■□□□□ 0.4
HOXC4-201ENST00000303406 FZD7O75084 574 aa17.57■□□□□ 0.4
HOXC4-201ENST00000303406 DKK1O94907 266 aa17.57■□□□□ 0.4
HOXC4-201ENST00000303406 F13BP05160 661 aa17.57■□□□□ 0.4
HOXC4-201ENST00000303406 CD63P08962 238 aa17.57■□□□□ 0.4
HOXC4-201ENST00000303406 SP9P0CG40 484 aa17.57■□□□□ 0.4
HOXC4-201ENST00000303406 SIRPAP78324 504 aa17.57■□□□□ 0.4
HOXC4-201ENST00000303406 E2F1Q01094 437 aa17.57■□□□□ 0.4
HOXC4-201ENST00000303406 ZP4Q12836 540 aa17.57■□□□□ 0.4
HOXC4-201ENST00000303406 NTRK2Q16620 822 aa17.57■□□□□ 0.4
HOXC4-201ENST00000303406 GLYR1Q49A26 553 aaPredicted RBP17.57■□□□□ 0.4
HOXC4-201ENST00000303406 EEF1A1P5Q5VTE0 462 aa17.57■□□□□ 0.4
HOXC4-201ENST00000303406 XKRXQ6PP77 449 aa17.57■□□□□ 0.4
HOXC4-201ENST00000303406 C16orf47Q6ZP98 133 aaPredicted RBP17.57■□□□□ 0.4
HOXC4-201ENST00000303406 TRILQ7L0X0 811 aa17.57■□□□□ 0.4
HOXC4-201ENST00000303406 ZNF554Q86TJ5 538 aa17.57■□□□□ 0.4
HOXC4-201ENST00000303406 FAM83FQ8NEG4 500 aaPredicted RBP17.57■□□□□ 0.4
HOXC4-201ENST00000303406 OR51L1Q8NGJ5 315 aa17.57■□□□□ 0.4
HOXC4-201ENST00000303406 OR6K6Q8NGW6 343 aa17.57■□□□□ 0.4
HOXC4-201ENST00000303406 ATF6BQ99941 703 aa17.57■□□□□ 0.4
HOXC4-201ENST00000303406 DEFB126Q9BYW3 111 aa17.57■□□□□ 0.4
HOXC4-201ENST00000303406 SRRQ9GZT4 340 aa17.57■□□□□ 0.4
HOXC4-201ENST00000303406 ZNF700Q9H0M5 742 aa17.57■□□□□ 0.4
HOXC4-201ENST00000303406 COPS3Q9UNS2 423 aa17.57■□□□□ 0.4
HOXC4-201ENST00000303406 SHISA3A0PJX4 238 aa17.57■□□□□ 0.4
HOXC4-201ENST00000303406 HSPB2A8KAH6 182 aa17.57■□□□□ 0.4
HOXC4-201ENST00000303406 FTCDNL1E5RQL4 147 aa17.57■□□□□ 0.4
HOXC4-201ENST00000303406 FLRT2O43155 660 aa17.57■□□□□ 0.4
HOXC4-201ENST00000303406 GATBO75879 557 aaKnown RBP17.57■□□□□ 0.4
HOXC4-201ENST00000303406 ZNF28P17035 718 aa17.57■□□□□ 0.4
HOXC4-201ENST00000303406 MYL9P24844 172 aa17.57■□□□□ 0.4
HOXC4-201ENST00000303406 GTF2E2P29084 291 aaKnown RBP17.57■□□□□ 0.4
HOXC4-201ENST00000303406 GRPRP30550 384 aa17.57■□□□□ 0.4
HOXC4-201ENST00000303406 PSMD7P51665 324 aa17.57■□□□□ 0.4
HOXC4-201ENST00000303406 BLVRAP53004 296 aa17.57■□□□□ 0.4
HOXC4-201ENST00000303406 RPL27P61353 136 aaKnown RBP17.57■□□□□ 0.4
HOXC4-201ENST00000303406 HSPB2Q16082 182 aa17.57■□□□□ 0.4
HOXC4-201ENST00000303406 EXT1Q16394 746 aa17.57■□□□□ 0.4
HOXC4-201ENST00000303406 TP53I3Q53FA7 332 aa17.57■□□□□ 0.4
HOXC4-201ENST00000303406 ZNF684Q5T5D7 378 aa17.57■□□□□ 0.4
HOXC4-201ENST00000303406 AGAP7PQ5VUJ5 663 aa17.57■□□□□ 0.4
HOXC4-201ENST00000303406 C1QL3Q5VWW1 255 aa17.57■□□□□ 0.4
HOXC4-201ENST00000303406 TMEM81Q6P7N7 255 aa17.57■□□□□ 0.4
HOXC4-201ENST00000303406 TIGD4Q8IY51 512 aa17.57■□□□□ 0.4
HOXC4-201ENST00000303406 RFLNBQ8N5W9 214 aa17.57■□□□□ 0.4
HOXC4-201ENST00000303406 GDPD1Q8N9F7 314 aa17.57■□□□□ 0.4
HOXC4-201ENST00000303406 SCAIQ8N9R8 606 aa17.57■□□□□ 0.4
HOXC4-201ENST00000303406 MFSD8Q8NHS3 518 aa17.57■□□□□ 0.4
HOXC4-201ENST00000303406 ZNF519Q8TB69 540 aa17.57■□□□□ 0.4
HOXC4-201ENST00000303406 RNF32Q9H0A6 362 aa17.57■□□□□ 0.4
HOXC4-201ENST00000303406 TXNIPQ9H3M7 391 aa17.57■□□□□ 0.4
HOXC4-201ENST00000303406 ADAM30Q9UKF2 790 aa17.57■□□□□ 0.4
HOXC4-201ENST00000303406 FKBP7Q9Y680 259 aa17.57■□□□□ 0.4
HOXC4-201ENST00000303406 ASCC3Q8N3C0 2202 aaKnown RBP17.56■□□□□ 0.4
HOXC4-201ENST00000303406 TRAV1-2A0A0B4J238 106 aa17.56■□□□□ 0.4
HOXC4-201ENST00000303406 A0A1W2PQ72 361 aa17.56■□□□□ 0.4
HOXC4-201ENST00000303406 NPIPB13A6NJU9 1138 aa17.56■□□□□ 0.4
HOXC4-201ENST00000303406 NPIPB4C9JG80 1138 aa17.56■□□□□ 0.4
HOXC4-201ENST00000303406 PHYHO14832 338 aa17.56■□□□□ 0.4
HOXC4-201ENST00000303406 GMFGO60234 142 aa17.56■□□□□ 0.4
HOXC4-201ENST00000303406 MPLP40238 635 aa17.56■□□□□ 0.4
HOXC4-201ENST00000303406 PTGDSP41222 190 aa17.56■□□□□ 0.4
HOXC4-201ENST00000303406 SLC3A1Q07837 685 aa17.56■□□□□ 0.4
HOXC4-201ENST00000303406 DBPQ10586 325 aaPredicted RBP17.56■□□□□ 0.4
HOXC4-201ENST00000303406 HBMQ6B0K9 141 aa17.56■□□□□ 0.4
HOXC4-201ENST00000303406 POMZP3Q6PJE2 187 aa17.56■□□□□ 0.4
HOXC4-201ENST00000303406 POC5Q8NA72 575 aa17.56■□□□□ 0.4
HOXC4-201ENST00000303406 M1APQ8TC57 530 aa17.56■□□□□ 0.4
HOXC4-201ENST00000303406 THAP3Q8WTV1 239 aaPredicted RBP17.56■□□□□ 0.4
HOXC4-201ENST00000303406 MR1Q95460 341 aa17.56■□□□□ 0.4
HOXC4-201ENST00000303406 C8orf44Q96CB5 159 aa17.56■□□□□ 0.4
HOXC4-201ENST00000303406 POTEKPQ9BYX7 375 aa17.56■□□□□ 0.4
HOXC4-201ENST00000303406 VSX1Q9NZR4 365 aaPredicted RBP17.56■□□□□ 0.4
HOXC4-201ENST00000303406 AKAP7Q9P0M2 348 aaPredicted RBP17.56■□□□□ 0.4
HOXC4-201ENST00000303406 COL27A1Q8IZC6 1860 aaPredicted RBP17.55■□□□□ 0.4
HOXC4-201ENST00000303406 IGHV1-45A0A0A0MS14 117 aa17.55■□□□□ 0.4
HOXC4-201ENST00000303406 ANKRD61A6NGH8 418 aa17.55■□□□□ 0.4
HOXC4-201ENST00000303406 AGRPO00253 132 aa17.55■□□□□ 0.4
HOXC4-201ENST00000303406 PLPP3O14495 311 aa17.55■□□□□ 0.4
HOXC4-201ENST00000303406 XKRYO14609 159 aa17.55■□□□□ 0.4
HOXC4-201ENST00000303406 SLC19A2O60779 497 aa17.55■□□□□ 0.4
HOXC4-201ENST00000303406 OR6A2O95222 327 aa17.55■□□□□ 0.4
HOXC4-201ENST00000303406 IGHEP01854 428 aa17.55■□□□□ 0.4
HOXC4-201ENST00000303406 UMODP07911 640 aa17.55■□□□□ 0.4
HOXC4-201ENST00000303406 TACSTD2P09758 323 aa17.55■□□□□ 0.4
HOXC4-201ENST00000303406 CCL4P13236 92 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms