RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 TRA2BP62995 288 aaKnown RBP13.44□□□□□ -0.26
COL6A2-201ENST00000300527 CTAG1AP78358 180 aa13.44□□□□□ -0.26
COL6A2-201ENST00000300527 FGL1Q08830 312 aa13.44□□□□□ -0.26
COL6A2-201ENST00000300527 TMEM35AQ53FP2 167 aa13.44□□□□□ -0.26
COL6A2-201ENST00000300527 ARHGAP11AQ6P4F7 1023 aa13.44□□□□□ -0.26
COL6A2-201ENST00000300527 STAC2Q6ZMT1 411 aa13.44□□□□□ -0.26
COL6A2-201ENST00000300527 STEAP2Q8NFT2 490 aa13.44□□□□□ -0.26
COL6A2-201ENST00000300527 OR2T27Q8NH04 317 aa13.44□□□□□ -0.26
COL6A2-201ENST00000300527 PAQR8Q8TEZ7 354 aa13.44□□□□□ -0.26
COL6A2-201ENST00000300527 CASTOR1Q8WTX7 329 aa13.44□□□□□ -0.26
COL6A2-201ENST00000300527 LCORQ96JN0 433 aaPredicted RBP13.44□□□□□ -0.26
COL6A2-201ENST00000300527 VRK1Q99986 396 aaPredicted RBP13.44□□□□□ -0.26
COL6A2-201ENST00000300527 SIGLEC6O43699 453 aa13.44□□□□□ -0.26
COL6A2-201ENST00000300527 PAK4O96013 591 aaPredicted RBP13.44□□□□□ -0.26
COL6A2-201ENST00000300527 ZNF806P0C7X5 589 aa13.44□□□□□ -0.26
COL6A2-201ENST00000300527 MAOBP27338 520 aa13.44□□□□□ -0.26
COL6A2-201ENST00000300527 CST5P28325 142 aaPredicted RBP13.44□□□□□ -0.26
COL6A2-201ENST00000300527 KCNJ3P48549 501 aa13.44□□□□□ -0.26
COL6A2-201ENST00000300527 RAB28P51157 221 aa13.44□□□□□ -0.26
COL6A2-201ENST00000300527 ZNF234Q14588 700 aa13.44□□□□□ -0.26
COL6A2-201ENST00000300527 MLF2Q15773 248 aaPredicted RBP13.44□□□□□ -0.26
COL6A2-201ENST00000300527 OR1S2Q8NGQ3 325 aa13.44□□□□□ -0.26
COL6A2-201ENST00000300527 OR8D1Q8WZ84 308 aa13.44□□□□□ -0.26
COL6A2-201ENST00000300527 UQCC2Q9BRT2 126 aa13.44□□□□□ -0.26
COL6A2-201ENST00000300527 GPR34Q9UPC5 381 aa13.44□□□□□ -0.26
COL6A2-201ENST00000300527 ZNF106Q9H2Y7 1883 aaKnown RBP13.44□□□□□ -0.26
COL6A2-201ENST00000300527 F8W036 122 aa13.43□□□□□ -0.26
COL6A2-201ENST00000300527 VEGFDO43915 354 aa13.43□□□□□ -0.26
COL6A2-201ENST00000300527 EEF1A1P68104 462 aaKnown RBP13.43□□□□□ -0.26
COL6A2-201ENST00000300527 BLOC1S1P78537 153 aa13.43□□□□□ -0.26
COL6A2-201ENST00000300527 OR7A5Q15622 319 aa13.43□□□□□ -0.26
COL6A2-201ENST00000300527 FAM220AQ7Z4H9 259 aa13.43□□□□□ -0.26
COL6A2-201ENST00000300527 SLC39A11Q8N1S5 342 aa13.43□□□□□ -0.26
COL6A2-201ENST00000300527 OR4K14Q8NGD5 310 aa13.43□□□□□ -0.26
COL6A2-201ENST00000300527 HAVCR1Q96D42 359 aa13.43□□□□□ -0.26
COL6A2-201ENST00000300527 TRPV4Q9HBA0 871 aa13.43□□□□□ -0.26
COL6A2-201ENST00000300527 UNC80Q8N2C7 3258 aa13.43□□□□□ -0.26
COL6A2-201ENST00000300527 ARPC4-TTLL3A0A0A6YYG9 625 aa13.43□□□□□ -0.26
COL6A2-201ENST00000300527 FADS1O60427 444 aa13.43□□□□□ -0.26
COL6A2-201ENST00000300527 IL5P05113 134 aa13.43□□□□□ -0.26
COL6A2-201ENST00000300527 CPMP14384 443 aa13.43□□□□□ -0.26
COL6A2-201ENST00000300527 PSMD4P55036 377 aaKnown RBP13.43□□□□□ -0.26
COL6A2-201ENST00000300527 DHODHQ02127 395 aa13.43□□□□□ -0.26
COL6A2-201ENST00000300527 CSRP2Q16527 193 aa13.43□□□□□ -0.26
COL6A2-201ENST00000300527 ZNF761Q86XN6 746 aaPredicted RBP13.43□□□□□ -0.26
COL6A2-201ENST00000300527 NAXDQ8IW45 347 aa13.43□□□□□ -0.26
COL6A2-201ENST00000300527 PUSL1Q8N0Z8 303 aaKnown RBP13.43□□□□□ -0.26
COL6A2-201ENST00000300527 ZNF619Q8N2I2 560 aa13.43□□□□□ -0.26
COL6A2-201ENST00000300527 TEX19Q8NA77 164 aa13.43□□□□□ -0.26
COL6A2-201ENST00000300527 GATSQ8NAP1 163 aa13.43□□□□□ -0.26
COL6A2-201ENST00000300527 OR52E1Q8NGJ3 308 aa13.43□□□□□ -0.26
COL6A2-201ENST00000300527 TSEN15Q8WW01 171 aaKnown RBP13.43□□□□□ -0.26
COL6A2-201ENST00000300527 ZNF681Q96N22 645 aa13.43□□□□□ -0.26
COL6A2-201ENST00000300527 ATG5Q9H1Y0 275 aa13.43□□□□□ -0.26
COL6A2-201ENST00000300527 TMEM74BQ9NUR3 256 aa13.43□□□□□ -0.26
COL6A2-201ENST00000300527 CES1P1Q9UKY3 287 aa13.43□□□□□ -0.26
COL6A2-201ENST00000300527 OR14I1A6ND48 311 aa13.43□□□□□ -0.26
COL6A2-201ENST00000300527 TMEM200CA6NKL6 621 aa13.43□□□□□ -0.26
COL6A2-201ENST00000300527 ELOA3DA6NLF2 546 aaPredicted RBP13.43□□□□□ -0.26
COL6A2-201ENST00000300527 HMSDA8MTL9 139 aa13.43□□□□□ -0.26
COL6A2-201ENST00000300527 FARS2O95363 451 aaKnown RBP13.43□□□□□ -0.26
COL6A2-201ENST00000300527 CXCL14O95715 111 aa13.43□□□□□ -0.26
COL6A2-201ENST00000300527 AMY2AP04746 511 aa13.43□□□□□ -0.26
COL6A2-201ENST00000300527 NGFRP08138 427 aa13.43□□□□□ -0.26
COL6A2-201ENST00000300527 ADRA2CP18825 462 aa13.43□□□□□ -0.26
COL6A2-201ENST00000300527 CCR4P51679 360 aa13.43□□□□□ -0.26
COL6A2-201ENST00000300527 SWI5Q1ZZU3 235 aa13.43□□□□□ -0.26
COL6A2-201ENST00000300527 ELOA3BQ3SY89 546 aa13.43□□□□□ -0.26
COL6A2-201ENST00000300527 LEG1Q6P5S2 330 aa13.43□□□□□ -0.26
COL6A2-201ENST00000300527 KCTD9Q7L273 389 aa13.43□□□□□ -0.26
COL6A2-201ENST00000300527 OR2W3Q7Z3T1 314 aa13.43□□□□□ -0.26
COL6A2-201ENST00000300527 FAM219AQ8IW50 185 aa13.43□□□□□ -0.26
COL6A2-201ENST00000300527 C12orf45Q8N5I9 185 aaPredicted RBP13.43□□□□□ -0.26
COL6A2-201ENST00000300527 ELOA3Q8NG57 546 aa13.43□□□□□ -0.26
COL6A2-201ENST00000300527 RGP1Q92546 391 aaPredicted RBP13.43□□□□□ -0.26
COL6A2-201ENST00000300527 TMPRSS13Q9BYE2 586 aa13.43□□□□□ -0.26
COL6A2-201ENST00000300527 SLC22A11Q9NSA0 550 aa13.43□□□□□ -0.26
COL6A2-201ENST00000300527 PCDHB10Q9UN67 800 aa13.43□□□□□ -0.26
COL6A2-201ENST00000300527 ZNF337Q9Y3M9 751 aa13.43□□□□□ -0.26
COL6A2-201ENST00000300527 TRAV8-7A0A075B6U6 113 aa13.42□□□□□ -0.26
COL6A2-201ENST00000300527 ZNF705EA8MWA4 302 aaPredicted RBP13.42□□□□□ -0.26
COL6A2-201ENST00000300527 PRR32B1ATL7 298 aa13.42□□□□□ -0.26
COL6A2-201ENST00000300527 PRKNO60260 465 aaPredicted RBP13.42□□□□□ -0.26
COL6A2-201ENST00000300527 SLC2A5P22732 501 aa13.42□□□□□ -0.26
COL6A2-201ENST00000300527 DLSTP36957 453 aa13.42□□□□□ -0.26
COL6A2-201ENST00000300527 MNDAP41218 407 aa13.42□□□□□ -0.26
COL6A2-201ENST00000300527 CDK3Q00526 305 aa13.42□□□□□ -0.26
COL6A2-201ENST00000300527 ARHGAP19Q14CB8 494 aa13.42□□□□□ -0.26
COL6A2-201ENST00000300527 MANEAQ5SRI9 462 aa13.42□□□□□ -0.26
COL6A2-201ENST00000300527 METRNLQ641Q3 311 aa13.42□□□□□ -0.26
COL6A2-201ENST00000300527 OR51A4Q8NGJ6 313 aa13.42□□□□□ -0.26
COL6A2-201ENST00000300527 OR5AK2Q8NH90 309 aa13.42□□□□□ -0.26
COL6A2-201ENST00000300527 THAP6Q8TBB0 222 aa13.42□□□□□ -0.26
COL6A2-201ENST00000300527 NSMAFQ92636 917 aa13.42□□□□□ -0.26
COL6A2-201ENST00000300527 PURGQ9UJV8 347 aaKnown RBP13.42□□□□□ -0.26
COL6A2-201ENST00000300527 TBC1D3KA0A087X1G2 549 aa13.42□□□□□ -0.26
COL6A2-201ENST00000300527 TBC1D3BA6NDS4 549 aa13.42□□□□□ -0.26
COL6A2-201ENST00000300527 TBC1D3FA6NER0 549 aaPredicted RBP13.42□□□□□ -0.26
COL6A2-201ENST00000300527 EEF1E1-BLOC1S5C9J1V9 151 aa13.42□□□□□ -0.26
COL6A2-201ENST00000300527 PRRT4C9JH25 899 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms