RNA–Protein interactions for RNA: ENST00000296043.6

SHROOM3-201, Transcript of shroom family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM3, Length 11,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-201ENST00000296043 CMTM3Q96MX0 182 aa10.96□□□□□ -0.65
SHROOM3-201ENST00000296043 OR1A1Q9P1Q5 309 aa10.96□□□□□ -0.65
SHROOM3-201ENST00000296043 C1GALT1C1LP0DN25 315 aa10.96□□□□□ -0.65
SHROOM3-201ENST00000296043 PTGER1P34995 402 aa10.96□□□□□ -0.65
SHROOM3-201ENST00000296043 IER5LQ5T953 404 aa10.96□□□□□ -0.65
SHROOM3-201ENST00000296043 OR8G2PQ6IF36 304 aa10.96□□□□□ -0.65
SHROOM3-201ENST00000296043 LTN1O94822 1766 aa10.96□□□□□ -0.65
SHROOM3-201ENST00000296043 OR4N5Q8IXE1 308 aa10.96□□□□□ -0.65
SHROOM3-201ENST00000296043 IL22RA2Q969J5 263 aa10.96□□□□□ -0.65
SHROOM3-201ENST00000296043 FLVCR2Q9UPI3 526 aa10.96□□□□□ -0.65
SHROOM3-201ENST00000296043 LEUTXA8MZ59 168 aa10.96□□□□□ -0.66
SHROOM3-201ENST00000296043 PHF1O43189 567 aaPredicted RBP10.96□□□□□ -0.66
SHROOM3-201ENST00000296043 GP2P55259 537 aaKnown RBP10.96□□□□□ -0.66
SHROOM3-201ENST00000296043 FAAP20Q6NZ36 180 aa10.96□□□□□ -0.66
SHROOM3-201ENST00000296043 ABHD4Q8TB40 342 aa10.96□□□□□ -0.66
SHROOM3-201ENST00000296043 NEURL2Q9BR09 285 aa10.96□□□□□ -0.66
SHROOM3-201ENST00000296043 TRAPPC1Q9Y5R8 145 aa10.96□□□□□ -0.66
SHROOM3-201ENST00000296043 TUBAL3A6NHL2 446 aa10.96□□□□□ -0.66
SHROOM3-201ENST00000296043 S1PR4O95977 384 aa10.96□□□□□ -0.66
SHROOM3-201ENST00000296043 HOXA1P49639 335 aaPredicted RBP10.96□□□□□ -0.66
SHROOM3-201ENST00000296043 UBE2G2P60604 165 aa10.96□□□□□ -0.66
SHROOM3-201ENST00000296043 SYT6Q5T7P8 510 aaPredicted RBP10.96□□□□□ -0.66
SHROOM3-201ENST00000296043 GDPD4Q6W3E5 623 aa10.96□□□□□ -0.66
SHROOM3-201ENST00000296043 ZNF620Q6ZNG0 422 aa10.96□□□□□ -0.66
SHROOM3-201ENST00000296043 ACOT7LQ6ZUV0 252 aa10.96□□□□□ -0.66
SHROOM3-201ENST00000296043 TMEM37Q8WXS4 190 aa10.96□□□□□ -0.66
SHROOM3-201ENST00000296043 ARSGQ96EG1 525 aa10.96□□□□□ -0.66
SHROOM3-201ENST00000296043 GLIS2Q9BZE0 524 aaPredicted RBP10.96□□□□□ -0.66
SHROOM3-201ENST00000296043 HMX1Q9NP08 348 aaPredicted RBP10.96□□□□□ -0.66
SHROOM3-201ENST00000296043 GPR160Q9UJ42 338 aa10.96□□□□□ -0.66
SHROOM3-201ENST00000296043 WTIPA6NIX2 430 aaPredicted RBP10.96□□□□□ -0.66
SHROOM3-201ENST00000296043 SLC38A8A6NNN8 435 aa10.96□□□□□ -0.66
SHROOM3-201ENST00000296043 LSMEM2Q8N112 164 aa10.96□□□□□ -0.66
SHROOM3-201ENST00000296043 TFGQ92734 400 aaPredicted RBP10.96□□□□□ -0.66
SHROOM3-201ENST00000296043 GHSRQ92847 366 aa10.96□□□□□ -0.66
SHROOM3-201ENST00000296043 C11orf49Q9H6J7 331 aa10.96□□□□□ -0.66
SHROOM3-201ENST00000296043 NCMAPQ5T1S8 102 aa10.96□□□□□ -0.66
SHROOM3-201ENST00000296043 CMBLQ96DG6 245 aa10.96□□□□□ -0.66
SHROOM3-201ENST00000296043 OR8B4Q96RC9 309 aa10.96□□□□□ -0.66
SHROOM3-201ENST00000296043 PEX12O00623 359 aa10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 TUSC2O75896 110 aa10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 ACKR3P25106 362 aa10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 CDK5Q00535 292 aa10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 LBHQ53QV2 105 aaPredicted RBP10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 ZNF514Q96K75 400 aaPredicted RBP10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 DNAJC5Q9H3Z4 198 aa10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 ZCCHC4Q9H5U6 513 aa10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 A0A0B4J203 849 aa10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 SERTM2A0A1B0GWG4 89 aa10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 RNASEK-C17orf49H0YIS7 233 aa10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 HCRTO43612 131 aa10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 ATP1B1P05026 303 aa10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 NID1P14543 1247 aa10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 HOXA11P31270 313 aaPredicted RBP10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 PRRT3Q5FWE3 981 aa10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 GCDHQ92947 438 aaPredicted RBP10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 GSTO2Q9H4Y5 243 aa10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 UCK1Q9HA47 277 aa10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 DEC1Q9P2X7 70 aa10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 GPR32O75388 356 aa10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 CSF3P09919 207 aa10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 TACR3P29371 465 aa10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 HTR6P50406 440 aa10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 CPZQ66K79 652 aa10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 SLC35D2Q76EJ3 337 aa10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 COMMD6Q7Z4G1 85 aa10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 GABRG1Q8N1C3 465 aa10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 NOX4Q9NPH5 578 aa10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 KLHL42Q9P2K6 505 aa10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 ADGRB1O14514 1584 aa10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 ALKBH1Q13686 389 aaKnown RBP10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 SIX1Q15475 284 aaPredicted RBP10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 ARRDC4Q8NCT1 418 aa10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 OR9K2Q8NGE7 335 aa10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 OR5L1Q8NGL2 311 aa10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 THOC3Q96J01 351 aaKnown RBP10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 LDAHQ9H6V9 325 aa10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 CRTAC1Q9NQ79 661 aa10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 EMCNQ9ULC0 261 aa10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 GPR31O00270 319 aa10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 IRAK2O43187 625 aa10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 OR8G3PP0DMU2 310 aa10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 MPEG1Q2M385 716 aa10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 LRRTM4Q86VH4 590 aa10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 RHOFQ9HBH0 211 aa10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 STEAP1Q9UHE8 339 aa10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 MN1Q10571 1320 aaPredicted RBP10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 LOC102723971A0A1B0GUV8 181 aa10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 CCKARP32238 428 aa10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 CCR9P51686 369 aa10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 PLCXD2Q0VAA5 305 aa10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 TMEM81Q6P7N7 255 aa10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 GPR137CQ8N3F9 429 aa10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 LILRB1Q8NHL6 650 aaPredicted RBP10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 ENKD1Q9H0I2 346 aa10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 OR14J1Q9UGF5 321 aa10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 BTNL2Q9UIR0 455 aa10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 CHD1O14646 1710 aa10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 RGS11O94810 467 aa10.95□□□□□ -0.66
SHROOM3-201ENST00000296043 ZNF26P17031 533 aaPredicted RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms