RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 GDE1Q9NZC3 331 aa12.09□□□□□ -0.47
SLC28A1-201ENST00000286749 KIF25Q9UIL4 384 aa12.09□□□□□ -0.47
SLC28A1-201ENST00000286749 SCML1Q9UN30 329 aa12.09□□□□□ -0.47
SLC28A1-201ENST00000286749 ZNF337Q9Y3M9 751 aa12.09□□□□□ -0.47
SLC28A1-201ENST00000286749 NUP210LQ5VU65 1888 aa12.09□□□□□ -0.47
SLC28A1-201ENST00000286749 A0A087WUJ7 227 aa12.08□□□□□ -0.47
SLC28A1-201ENST00000286749 A0A1B0GTQ1 180 aa12.08□□□□□ -0.47
SLC28A1-201ENST00000286749 hCG_1807616A0A1W2PRN6 198 aa12.08□□□□□ -0.47
SLC28A1-201ENST00000286749 TMEM72A0PK05 275 aa12.08□□□□□ -0.47
SLC28A1-201ENST00000286749 OR2M5A3KFT3 312 aa12.08□□□□□ -0.47
SLC28A1-201ENST00000286749 A6NCN8 305 aa12.08□□□□□ -0.47
SLC28A1-201ENST00000286749 ARPC3O15145 178 aa12.08□□□□□ -0.47
SLC28A1-201ENST00000286749 HCRTR1O43613 425 aa12.08□□□□□ -0.47
SLC28A1-201ENST00000286749 NDUFB6O95139 128 aa12.08□□□□□ -0.47
SLC28A1-201ENST00000286749 CALCBP10092 127 aa12.08□□□□□ -0.47
SLC28A1-201ENST00000286749 POU3F2P20265 443 aaPredicted RBP12.08□□□□□ -0.47
SLC28A1-201ENST00000286749 NFYAP23511 347 aaPredicted RBP12.08□□□□□ -0.47
SLC28A1-201ENST00000286749 CDKN2AP42771 156 aaKnown RBP12.08□□□□□ -0.47
SLC28A1-201ENST00000286749 TAGLNQ01995 201 aaKnown RBP12.08□□□□□ -0.47
SLC28A1-201ENST00000286749 PLA2G7Q13093 441 aa12.08□□□□□ -0.47
SLC28A1-201ENST00000286749 SFRP5Q5T4F7 317 aa12.08□□□□□ -0.47
SLC28A1-201ENST00000286749 BPHLQ86WA6 291 aaPredicted RBP12.08□□□□□ -0.47
SLC28A1-201ENST00000286749 RCBTB1Q8NDN9 531 aa12.08□□□□□ -0.47
SLC28A1-201ENST00000286749 BAHD1Q8TBE0 780 aaPredicted RBP12.08□□□□□ -0.47
SLC28A1-201ENST00000286749 RSC1A1Q92681 617 aa12.08□□□□□ -0.47
SLC28A1-201ENST00000286749 BADQ92934 168 aa12.08□□□□□ -0.47
SLC28A1-201ENST00000286749 MIB2Q96AX9 1013 aa12.08□□□□□ -0.47
SLC28A1-201ENST00000286749 SPACA7Q96KW9 195 aa12.08□□□□□ -0.47
SLC28A1-201ENST00000286749 TRANK1O15050 2925 aa12.08□□□□□ -0.48
SLC28A1-201ENST00000286749 REV3LO60673 3130 aa12.08□□□□□ -0.48
SLC28A1-201ENST00000286749 H3BSH0 61 aa12.08□□□□□ -0.48
SLC28A1-201ENST00000286749 K7EQS6 105 aa12.08□□□□□ -0.48
SLC28A1-201ENST00000286749 PPM1BO75688 479 aa12.08□□□□□ -0.48
SLC28A1-201ENST00000286749 IFNA16P05015 189 aa12.08□□□□□ -0.48
SLC28A1-201ENST00000286749 KIR2DL1P43626 348 aaPredicted RBP12.08□□□□□ -0.48
SLC28A1-201ENST00000286749 LBX1P52954 281 aa12.08□□□□□ -0.48
SLC28A1-201ENST00000286749 RAB38P57729 211 aa12.08□□□□□ -0.48
SLC28A1-201ENST00000286749 MRPS10P82664 201 aaKnown RBP12.08□□□□□ -0.48
SLC28A1-201ENST00000286749 ZNF141Q15928 474 aa12.08□□□□□ -0.48
SLC28A1-201ENST00000286749 Q499Y3 187 aa12.08□□□□□ -0.48
SLC28A1-201ENST00000286749 TMEM240Q5SV17 173 aa12.08□□□□□ -0.48
SLC28A1-201ENST00000286749 NPSR1Q6W5P4 371 aa12.08□□□□□ -0.48
SLC28A1-201ENST00000286749 TMPRSS12Q86WS5 348 aa12.08□□□□□ -0.48
SLC28A1-201ENST00000286749 DND1Q8IYX4 353 aaKnown RBP12.08□□□□□ -0.48
SLC28A1-201ENST00000286749 OR9A4Q8NGU2 314 aa12.08□□□□□ -0.48
SLC28A1-201ENST00000286749 TWSG1Q9GZX9 223 aa12.08□□□□□ -0.48
SLC28A1-201ENST00000286749 SLITRK2Q9H156 845 aa12.08□□□□□ -0.48
SLC28A1-201ENST00000286749 LRIT1Q9P2V4 623 aa12.08□□□□□ -0.48
SLC28A1-201ENST00000286749 A0A1B0GTH9 108 aa12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 TUBAL3A6NHL2 446 aa12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 C5orf67F2Z3F1 127 aa12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 BLOC1S5-TXNDC5H3BN57 136 aa12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 PYCARD-AS1I3L0S3 204 aa12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 CDK2AP1O14519 115 aa12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 OR2A4O95047 310 aa12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 CSTAP01040 98 aa12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 CTSBP07858 339 aa12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 ITPKBP27987 946 aa12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 GDI1P31150 447 aa12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 PGDP52209 483 aa12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 PPP1CAP62136 330 aa12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 FAM220AQ7Z4H9 259 aa12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 PRSS42Q7Z5A4 293 aa12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 SFTPA2Q8IWL1 248 aa12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 OR5AK2Q8NH90 309 aa12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 FAM131CQ96AQ9 280 aa12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 CXorf58Q96LI9 332 aa12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 OR2A7Q96R45 310 aa12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 OR1F2PQ96R84 312 aa12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 UTP23Q9BRU9 249 aaKnown RBP12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 REG4Q9BYZ8 158 aa12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 SDHAF2Q9NX18 166 aa12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 FRRS1LQ9P0K9 344 aa12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 MRM2Q9UI43 246 aaKnown RBP12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 ATG2AQ2TAZ0 1938 aa12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 MCRIP1C9JLW8 97 aa12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 NPIPB9F8W1W9 429 aa12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 TGFBR3LH3BV60 316 aa12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 UPK3AO75631 287 aa12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 CDC123O75794 336 aaPredicted RBP12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 SIX6O95475 246 aa12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 IFI6P09912 130 aa12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 VSIG10L2P0DP72 767 aa12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 PTGS2P35354 604 aa12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 AQP2P41181 271 aa12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 MAP2K6P52564 334 aa12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 RPS4XP62701 263 aaKnown RBP12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 OC90Q02509 493 aaPredicted RBP12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 DEFB110Q30KQ9 67 aa12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 TMEM196Q5HYL7 178 aa12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 LIPNQ5VXI9 398 aa12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 SLC6A19Q695T7 634 aa12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 RNF44Q7L0R7 432 aa12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 SLC51BQ86UW2 128 aa12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 JAZF1Q86VZ6 243 aa12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 OR4C3Q8NH37 302 aa12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 RIT1Q92963 219 aa12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 ADAD1Q96M93 576 aaKnown RBP12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 VSTM2LQ96N03 204 aa12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 LINC00052Q96N35 136 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms