RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 SMPDL3BQ92485 455 aa16.73■□□□□ 0.27
PDLIM3-201ENST00000284767 VSTM2LQ96N03 204 aa16.73■□□□□ 0.27
PDLIM3-201ENST00000284767 LMF1Q96S06 567 aa16.73■□□□□ 0.27
PDLIM3-201ENST00000284767 IFT27Q9BW83 186 aa16.73■□□□□ 0.27
PDLIM3-201ENST00000284767 OR51V1Q9H2C8 321 aa16.73■□□□□ 0.27
PDLIM3-201ENST00000284767 BRD7Q9NPI1 651 aa16.73■□□□□ 0.27
PDLIM3-201ENST00000284767 SLC35A3Q9Y2D2 325 aa16.73■□□□□ 0.27
PDLIM3-201ENST00000284767 RIIAD1A6NNX1 92 aa16.73■□□□□ 0.27
PDLIM3-201ENST00000284767 M0R233 179 aa16.73■□□□□ 0.27
PDLIM3-201ENST00000284767 KHNYNO15037 678 aaKnown RBP16.73■□□□□ 0.27
PDLIM3-201ENST00000284767 ARL6IP5O75915 188 aa16.73■□□□□ 0.27
PDLIM3-201ENST00000284767 ARL4DP49703 201 aa16.73■□□□□ 0.27
PDLIM3-201ENST00000284767 DBPQ10586 325 aaPredicted RBP16.73■□□□□ 0.27
PDLIM3-201ENST00000284767 TCTE1Q5JU00 501 aa16.73■□□□□ 0.27
PDLIM3-201ENST00000284767 ZCCHC12Q6PEW1 402 aa16.73■□□□□ 0.27
PDLIM3-201ENST00000284767 RPTNQ6XPR3 784 aa16.73■□□□□ 0.27
PDLIM3-201ENST00000284767 TMPRSS9Q7Z410 1059 aa16.73■□□□□ 0.27
PDLIM3-201ENST00000284767 PRSS58Q8IYP2 241 aa16.73■□□□□ 0.27
PDLIM3-201ENST00000284767 UXS1Q8NBZ7 420 aa16.73■□□□□ 0.27
PDLIM3-201ENST00000284767 RCBTB1Q8NDN9 531 aa16.73■□□□□ 0.27
PDLIM3-201ENST00000284767 PFN4Q8NHR9 129 aa16.73■□□□□ 0.27
PDLIM3-201ENST00000284767 CNOT9Q92600 299 aaKnown RBP16.73■□□□□ 0.27
PDLIM3-201ENST00000284767 ELF4Q99607 663 aaPredicted RBP16.73■□□□□ 0.27
PDLIM3-201ENST00000284767 ST6GALNAC2Q9UJ37 374 aa16.73■□□□□ 0.27
PDLIM3-201ENST00000284767 SYNDIG1LA6NDD5 238 aa16.72■□□□□ 0.27
PDLIM3-201ENST00000284767 G3V3Q6 166 aa16.72■□□□□ 0.27
PDLIM3-201ENST00000284767 GLB1P16278 677 aa16.72■□□□□ 0.27
PDLIM3-201ENST00000284767 GPR3P46089 330 aa16.72■□□□□ 0.27
PDLIM3-201ENST00000284767 EFNA3P52797 238 aa16.72■□□□□ 0.27
PDLIM3-201ENST00000284767 HSD11B2P80365 405 aa16.72■□□□□ 0.27
PDLIM3-201ENST00000284767 IGLV3-21P80748 117 aaPredicted RBP16.72■□□□□ 0.27
PDLIM3-201ENST00000284767 POU4F2Q12837 409 aa16.72■□□□□ 0.27
PDLIM3-201ENST00000284767 GRM7Q14831 915 aa16.72■□□□□ 0.27
PDLIM3-201ENST00000284767 TMPRSS11FQ6ZWK6 438 aa16.72■□□□□ 0.27
PDLIM3-201ENST00000284767 NLRC3Q7RTR2 1065 aa16.72■□□□□ 0.27
PDLIM3-201ENST00000284767 GPAT4Q86UL3 456 aa16.72■□□□□ 0.27
PDLIM3-201ENST00000284767 UBALD2Q8IYN6 164 aa16.72■□□□□ 0.27
PDLIM3-201ENST00000284767 CDK20Q8IZL9 346 aa16.72■□□□□ 0.27
PDLIM3-201ENST00000284767 OR4D9Q8NGE8 314 aa16.72■□□□□ 0.27
PDLIM3-201ENST00000284767 OR5J2Q8NH18 312 aa16.72■□□□□ 0.27
PDLIM3-201ENST00000284767 C16orf52Q8NHV5 167 aa16.72■□□□□ 0.27
PDLIM3-201ENST00000284767 MAFAQ8NHW3 353 aaPredicted RBP16.72■□□□□ 0.27
PDLIM3-201ENST00000284767 TSLPQ969D9 159 aa16.72■□□□□ 0.27
PDLIM3-201ENST00000284767 C20orf141Q9NUB4 165 aa16.72■□□□□ 0.27
PDLIM3-201ENST00000284767 AKAP7Q9P0M2 348 aaPredicted RBP16.72■□□□□ 0.27
PDLIM3-201ENST00000284767 RPS6KB2Q9UBS0 482 aa16.72■□□□□ 0.27
PDLIM3-201ENST00000284767 ATXN7L1Q9ULK2 861 aaPredicted RBP16.72■□□□□ 0.27
PDLIM3-201ENST00000284767 FITM1A5D6W6 292 aa16.72■□□□□ 0.27
PDLIM3-201ENST00000284767 ZNF749O43361 778 aa16.72■□□□□ 0.27
PDLIM3-201ENST00000284767 PYCR1P32322 319 aa16.72■□□□□ 0.27
PDLIM3-201ENST00000284767 PTGS2P35354 604 aa16.72■□□□□ 0.27
PDLIM3-201ENST00000284767 GDNFP39905 211 aa16.72■□□□□ 0.27
PDLIM3-201ENST00000284767 SKP1P63208 163 aa16.72■□□□□ 0.27
PDLIM3-201ENST00000284767 UBE2NLQ5JXB2 153 aa16.72■□□□□ 0.27
PDLIM3-201ENST00000284767 C1orf189Q5VU69 101 aa16.72■□□□□ 0.27
PDLIM3-201ENST00000284767 TMEM151BQ8IW70 566 aa16.72■□□□□ 0.27
PDLIM3-201ENST00000284767 FTMTQ8N4E7 242 aa16.72■□□□□ 0.27
PDLIM3-201ENST00000284767 PTCHD1Q96NR3 888 aa16.72■□□□□ 0.27
PDLIM3-201ENST00000284767 RAB33BQ9H082 229 aa16.72■□□□□ 0.27
PDLIM3-201ENST00000284767 METTL17Q9H7H0 456 aaPredicted RBP16.72■□□□□ 0.27
PDLIM3-201ENST00000284767 PLEKHA1Q9HB21 404 aa16.72■□□□□ 0.27
PDLIM3-201ENST00000284767 KIF25Q9UIL4 384 aa16.72■□□□□ 0.27
PDLIM3-201ENST00000284767 A0A1W2PPL8 197 aa16.71■□□□□ 0.27
PDLIM3-201ENST00000284767 C19orf67A6NJJ6 358 aa16.71■□□□□ 0.27
PDLIM3-201ENST00000284767 DUX1O43812 170 aa16.71■□□□□ 0.27
PDLIM3-201ENST00000284767 SNAPC5O75971 98 aa16.71■□□□□ 0.27
PDLIM3-201ENST00000284767 HPXP02790 462 aa16.71■□□□□ 0.27
PDLIM3-201ENST00000284767 CRYZQ08257 329 aaKnown RBP16.71■□□□□ 0.27
PDLIM3-201ENST00000284767 OR1Q1Q15612 314 aa16.71■□□□□ 0.27
PDLIM3-201ENST00000284767 NDUFAF6Q330K2 333 aa16.71■□□□□ 0.27
PDLIM3-201ENST00000284767 LYSMD4Q5XG99 296 aa16.71■□□□□ 0.27
PDLIM3-201ENST00000284767 OVCH1Q7RTY7 1134 aa16.71■□□□□ 0.27
PDLIM3-201ENST00000284767 SDR16C5Q8N3Y7 309 aa16.71■□□□□ 0.27
PDLIM3-201ENST00000284767 ZNF527Q8NB42 609 aa16.71■□□□□ 0.27
PDLIM3-201ENST00000284767 GALNT11Q8NCW6 608 aa16.71■□□□□ 0.27
PDLIM3-201ENST00000284767 OR2T4Q8NH00 348 aa16.71■□□□□ 0.27
PDLIM3-201ENST00000284767 GRHL3Q8TE85 626 aa16.71■□□□□ 0.27
PDLIM3-201ENST00000284767 RBPMSQ93062 196 aaKnown RBP16.71■□□□□ 0.27
PDLIM3-201ENST00000284767 LCORQ96JN0 433 aaPredicted RBP16.71■□□□□ 0.27
PDLIM3-201ENST00000284767 BAIAP2Q9UQB8 552 aa16.71■□□□□ 0.27
PDLIM3-201ENST00000284767 A0A1W2PRG6 482 aa16.71■□□□□ 0.26
PDLIM3-201ENST00000284767 OGG1O15527 345 aa16.71■□□□□ 0.26
PDLIM3-201ENST00000284767 CFDP00746 253 aaPredicted RBP16.71■□□□□ 0.26
PDLIM3-201ENST00000284767 CT45A8P0DMV1 189 aa16.71■□□□□ 0.26
PDLIM3-201ENST00000284767 CT45A9P0DMV2 189 aa16.71■□□□□ 0.26
PDLIM3-201ENST00000284767 ZNF3P17036 446 aa16.71■□□□□ 0.26
PDLIM3-201ENST00000284767 SELENOPP49908 381 aa16.71■□□□□ 0.26
PDLIM3-201ENST00000284767 BLVRAP53004 296 aa16.71■□□□□ 0.26
PDLIM3-201ENST00000284767 CT45A2Q5DJT8 189 aa16.71■□□□□ 0.26
PDLIM3-201ENST00000284767 FAAH2Q6GMR7 532 aa16.71■□□□□ 0.26
PDLIM3-201ENST00000284767 THSD4Q6ZMP0 1018 aa16.71■□□□□ 0.26
PDLIM3-201ENST00000284767 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.71■□□□□ 0.26
PDLIM3-201ENST00000284767 OR13C5Q8NGS8 318 aa16.71■□□□□ 0.26
PDLIM3-201ENST00000284767 THAP4Q8WY91 577 aa16.71■□□□□ 0.26
PDLIM3-201ENST00000284767 HOXB13Q92826 284 aaPredicted RBP16.71■□□□□ 0.26
PDLIM3-201ENST00000284767 CCDC74AQ96AQ1 378 aa16.71■□□□□ 0.26
PDLIM3-201ENST00000284767 LMF2Q9BU23 707 aaKnown RBP16.71■□□□□ 0.26
PDLIM3-201ENST00000284767 OR10A5Q9H207 317 aa16.71■□□□□ 0.26
PDLIM3-201ENST00000284767 PNO1Q9NRX1 252 aaKnown RBP16.71■□□□□ 0.26
PDLIM3-201ENST00000284767 LANCL2Q9NS86 450 aa16.71■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms