RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 OR2M7Q8NG81 312 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 OR4C5Q8NGB2 326 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 OR13C9Q8NGT0 318 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 ZFP90Q8TF47 636 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 C7orf43Q8WVR3 580 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 GPR62Q9BZJ7 368 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 PISDQ9UG56 409 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 PSMB1P20618 241 aaKnown RBP8.14□□□□□ -1.11
NIPBL-201ENST00000282516 SLC1A3P43003 542 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 ZNF90Q03938 601 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 KIAA0141Q14154 515 aaPredicted RBP8.14□□□□□ -1.11
NIPBL-201ENST00000282516 CPZQ66K79 652 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 USP53Q70EK8 1073 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 SLC16A14Q7RTX9 510 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 MDGA2Q7Z553 956 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 SLC6A18Q96N87 628 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 SELENOIQ9C0D9 397 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 WWTR1Q9GZV5 400 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 ADAM29Q9UKF5 820 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 GABRQQ9UN88 632 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 PMS2P2O95744 297 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 HNRNPA3P51991 378 aaKnown RBP8.14□□□□□ -1.11
NIPBL-201ENST00000282516 SIM1P81133 766 aaPredicted RBP8.14□□□□□ -1.11
NIPBL-201ENST00000282516 OR5M8Q8NGP6 311 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 NETO1Q8TDF5 533 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 TFAP2CQ92754 450 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 GGHQ92820 318 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 HLA-CQ95604 372 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 NOL4LQ96MY1 436 aaPredicted RBP8.14□□□□□ -1.11
NIPBL-201ENST00000282516 ZNF300Q96RE9 604 aaPredicted RBP8.14□□□□□ -1.11
NIPBL-201ENST00000282516 OR52A1Q9UKL2 312 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 RNF150Q9ULK6 438 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 FCGR2AP12318 317 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 CPN1P15169 458 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 TACR1P25103 407 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 SPINT3P49223 89 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 NR0B2Q15466 257 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 Q6ZRG5 221 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 OR52B6Q8NGF0 335 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 CLEC4DQ8WXI8 215 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 ZNF516Q92618 1163 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 TCTN2Q96GX1 697 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 DUSP23Q9BVJ7 150 aa8.14□□□□□ -1.11
NIPBL-201ENST00000282516 A6NL46 340 aa8.13□□□□□ -1.11
NIPBL-201ENST00000282516 PHF1O43189 567 aaPredicted RBP8.13□□□□□ -1.11
NIPBL-201ENST00000282516 OR5H8P0DN80 308 aa8.13□□□□□ -1.11
NIPBL-201ENST00000282516 TIGITQ495A1 244 aa8.13□□□□□ -1.11
NIPBL-201ENST00000282516 TRNP1Q6NT89 227 aa8.13□□□□□ -1.11
NIPBL-201ENST00000282516 MFSD6LQ8IWD5 586 aa8.13□□□□□ -1.11
NIPBL-201ENST00000282516 ADGRG5Q8IZF4 528 aa8.13□□□□□ -1.11
NIPBL-201ENST00000282516 LRRC18Q8N456 261 aa8.13□□□□□ -1.11
NIPBL-201ENST00000282516 SFT2D1Q8WV19 159 aa8.13□□□□□ -1.11
NIPBL-201ENST00000282516 SUCNR1Q9BXA5 334 aa8.13□□□□□ -1.11
NIPBL-201ENST00000282516 SDR39U1Q9NRG7 319 aaPredicted RBP8.13□□□□□ -1.11
NIPBL-201ENST00000282516 SPTBN2O15020 2390 aa8.13□□□□□ -1.11
NIPBL-201ENST00000282516 AKAP12Q02952 1782 aa8.13□□□□□ -1.11
NIPBL-201ENST00000282516 G3V3Q6 166 aa8.13□□□□□ -1.11
NIPBL-201ENST00000282516 PIRO00625 290 aa8.13□□□□□ -1.11
NIPBL-201ENST00000282516 FOXD2O60548 495 aaPredicted RBP8.13□□□□□ -1.11
NIPBL-201ENST00000282516 SLC16A7O60669 478 aa8.13□□□□□ -1.11
NIPBL-201ENST00000282516 STAG3L2P0CL84 134 aa8.13□□□□□ -1.11
NIPBL-201ENST00000282516 F3P13726 295 aa8.13□□□□□ -1.11
NIPBL-201ENST00000282516 HLA-FP30511 346 aa8.13□□□□□ -1.11
NIPBL-201ENST00000282516 PIN1Q13526 163 aaPredicted RBP8.13□□□□□ -1.11
NIPBL-201ENST00000282516 FXNQ16595 210 aa8.13□□□□□ -1.11
NIPBL-201ENST00000282516 FRMD1Q8N878 549 aa8.13□□□□□ -1.11
NIPBL-201ENST00000282516 OR10J5Q8NHC4 309 aa8.13□□□□□ -1.11
NIPBL-201ENST00000282516 URGCP-MRPS24S4R325 110 aa8.13□□□□□ -1.11
NIPBL-201ENST00000282516 SOWAHBA6NEL2 793 aa8.13□□□□□ -1.11
NIPBL-201ENST00000282516 H7BYZ3 331 aa8.13□□□□□ -1.11
NIPBL-201ENST00000282516 USF1P22415 310 aaPredicted RBP8.13□□□□□ -1.11
NIPBL-201ENST00000282516 SLC7A5P1Q8MH63 180 aa8.13□□□□□ -1.11
NIPBL-201ENST00000282516 RIMS4Q9H426 269 aaPredicted RBP8.13□□□□□ -1.11
NIPBL-201ENST00000282516 DDX31Q9H8H2 851 aaKnown RBP8.13□□□□□ -1.11
NIPBL-201ENST00000282516 MN1Q10571 1320 aaPredicted RBP8.13□□□□□ -1.11
NIPBL-201ENST00000282516 HSPB6O14558 160 aa8.13□□□□□ -1.11
NIPBL-201ENST00000282516 SUSD5O60279 629 aa8.13□□□□□ -1.11
NIPBL-201ENST00000282516 NTF3P20783 257 aa8.13□□□□□ -1.11
NIPBL-201ENST00000282516 LTC4SQ16873 150 aa8.13□□□□□ -1.11
NIPBL-201ENST00000282516 SIAH1Q8IUQ4 282 aa8.13□□□□□ -1.11
NIPBL-201ENST00000282516 SLC22A24Q8N4F4 322 aa8.13□□□□□ -1.11
NIPBL-201ENST00000282516 CCDC74AQ96AQ1 378 aa8.13□□□□□ -1.11
NIPBL-201ENST00000282516 SGK494L7N484 410 aa8.13□□□□□ -1.11
NIPBL-201ENST00000282516 WNT7AO00755 349 aa8.13□□□□□ -1.11
NIPBL-201ENST00000282516 PEX10O60683 326 aa8.13□□□□□ -1.11
NIPBL-201ENST00000282516 CPMP14384 443 aa8.13□□□□□ -1.11
NIPBL-201ENST00000282516 HMGCLP35914 325 aa8.13□□□□□ -1.11
NIPBL-201ENST00000282516 ELLP55199 621 aaPredicted RBP8.13□□□□□ -1.11
NIPBL-201ENST00000282516 ZNF626Q68DY1 528 aa8.13□□□□□ -1.11
NIPBL-201ENST00000282516 OR7E24Q6IFN5 339 aa8.13□□□□□ -1.11
NIPBL-201ENST00000282516 CLECL1Q8IZS7 167 aa8.13□□□□□ -1.11
NIPBL-201ENST00000282516 C10orf90Q96M02 699 aa8.13□□□□□ -1.11
NIPBL-201ENST00000282516 ARL2-SNX15V9GYD0 113 aa8.13□□□□□ -1.11
NIPBL-201ENST00000282516 COL3A1P02461 1466 aaPredicted RBP8.13□□□□□ -1.11
NIPBL-201ENST00000282516 MST1RQ04912 1400 aa8.13□□□□□ -1.11
NIPBL-201ENST00000282516 CEACAM7Q14002 265 aa8.13□□□□□ -1.11
NIPBL-201ENST00000282516 RPE65Q16518 533 aa8.13□□□□□ -1.11
NIPBL-201ENST00000282516 SHARPINQ9H0F6 387 aa8.13□□□□□ -1.11
NIPBL-201ENST00000282516 C1GALT1Q9NS00 363 aa8.13□□□□□ -1.11
NIPBL-201ENST00000282516 TDRD6O60522 2096 aaKnown RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms