RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 BIDP55957 195 aa5.77□□□□□ -1.49
CD44-204ENST00000279452 CLRN1P58418 232 aa5.77□□□□□ -1.49
CD44-204ENST00000279452 VLDLRP98155 873 aa5.77□□□□□ -1.49
CD44-204ENST00000279452 TGFBR3Q03167 851 aa5.77□□□□□ -1.49
CD44-204ENST00000279452 CHRNB3Q05901 458 aa5.77□□□□□ -1.49
CD44-204ENST00000279452 RPL18Q07020 188 aaKnown RBP5.77□□□□□ -1.49
CD44-204ENST00000279452 LGALS3BPQ08380 585 aa5.77□□□□□ -1.49
CD44-204ENST00000279452 CAMK2DQ13557 499 aa5.77□□□□□ -1.49
CD44-204ENST00000279452 TRIM25Q14258 630 aaKnown RBP5.77□□□□□ -1.49
CD44-204ENST00000279452 TAF11Q15544 211 aa5.77□□□□□ -1.49
CD44-204ENST00000279452 FAM98BQ52LJ0 330 aaKnown RBP5.77□□□□□ -1.49
CD44-204ENST00000279452 MTX3Q5HYI7 312 aa5.77□□□□□ -1.49
CD44-204ENST00000279452 LCN8Q6JVE9 175 aa5.77□□□□□ -1.49
CD44-204ENST00000279452 TBPL2Q6SJ96 375 aa5.77□□□□□ -1.49
CD44-204ENST00000279452 LINC00114Q6XXX2 140 aa5.77□□□□□ -1.49
CD44-204ENST00000279452 CCDC121Q6ZUS5 278 aa5.77□□□□□ -1.49
CD44-204ENST00000279452 MBOAT2Q6ZWT7 520 aa5.77□□□□□ -1.49
CD44-204ENST00000279452 SLC35D2Q76EJ3 337 aa5.77□□□□□ -1.49
CD44-204ENST00000279452 IGFN1Q86VF2 1251 aa5.77□□□□□ -1.49
CD44-204ENST00000279452 SPATA24Q86W54 205 aa5.77□□□□□ -1.49
CD44-204ENST00000279452 EPHX4Q8IUS5 362 aa5.77□□□□□ -1.49
CD44-204ENST00000279452 ZDHHC21Q8IVQ6 265 aa5.77□□□□□ -1.49
CD44-204ENST00000279452 POMGNT2Q8NAT1 580 aa5.77□□□□□ -1.49
CD44-204ENST00000279452 ADPRHL1Q8NDY3 354 aa5.77□□□□□ -1.49
CD44-204ENST00000279452 PIK3C3Q8NEB9 887 aa5.77□□□□□ -1.49
CD44-204ENST00000279452 ANKK1Q8NFD2 765 aa5.77□□□□□ -1.49
CD44-204ENST00000279452 OR13C2Q8NGS9 318 aa5.77□□□□□ -1.49
CD44-204ENST00000279452 OR52N5Q8NH56 324 aa5.77□□□□□ -1.49
CD44-204ENST00000279452 OR51A7Q8NH64 312 aa5.77□□□□□ -1.49
CD44-204ENST00000279452 ACOT11Q8WXI4 607 aaPredicted RBP5.77□□□□□ -1.49
CD44-204ENST00000279452 MUCL1Q96DR8 90 aa5.77□□□□□ -1.49
CD44-204ENST00000279452 C14orf79Q96F83 325 aa5.77□□□□□ -1.49
CD44-204ENST00000279452 FAM46AQ96IP4 442 aaKnown RBP5.77□□□□□ -1.49
CD44-204ENST00000279452 RSRC1Q96IZ7 334 aaKnown RBP5.77□□□□□ -1.49
CD44-204ENST00000279452 ZNF426Q9BUY5 554 aa5.77□□□□□ -1.49
CD44-204ENST00000279452 HDHD5Q9BXW7 423 aa5.77□□□□□ -1.49
CD44-204ENST00000279452 NDEL1Q9GZM8 345 aa5.77□□□□□ -1.49
CD44-204ENST00000279452 NMNAT1Q9HAN9 279 aaPredicted RBP5.77□□□□□ -1.49
CD44-204ENST00000279452 B3GAT2Q9NPZ5 323 aa5.77□□□□□ -1.49
CD44-204ENST00000279452 MEPEQ9NQ76 525 aaPredicted RBP5.77□□□□□ -1.49
CD44-204ENST00000279452 TAS2R16Q9NYV7 291 aa5.77□□□□□ -1.49
CD44-204ENST00000279452 NDUFAF4Q9P032 175 aa5.77□□□□□ -1.49
CD44-204ENST00000279452 B3GAT1Q9P2W7 334 aa5.77□□□□□ -1.49
CD44-204ENST00000279452 TMCC3Q9ULS5 477 aa5.77□□□□□ -1.49
CD44-204ENST00000279452 RCE1Q9Y256 329 aa5.77□□□□□ -1.49
CD44-204ENST00000279452 NOX1Q9Y5S8 564 aa5.77□□□□□ -1.49
CD44-204ENST00000279452 NCOA6Q14686 2063 aaPredicted RBP5.77□□□□□ -1.49
CD44-204ENST00000279452 PHF3Q92576 2039 aaKnown RBP5.77□□□□□ -1.49
CD44-204ENST00000279452 ARHGAP21Q5T5U3 1957 aa5.76□□□□□ -1.49
CD44-204ENST00000279452 FASNP49327 2511 aaKnown RBP5.76□□□□□ -1.49
CD44-204ENST00000279452 POLEQ07864 2286 aa5.76□□□□□ -1.49
CD44-204ENST00000279452 A0A087WUU8 490 aa5.76□□□□□ -1.49
CD44-204ENST00000279452 A0A096LPE4 126 aa5.76□□□□□ -1.49
CD44-204ENST00000279452 TRBV4-1A0A0J9YWV2 114 aa5.76□□□□□ -1.49
CD44-204ENST00000279452 A0A1W2PPZ6 126 aa5.76□□□□□ -1.49
CD44-204ENST00000279452 SLC35F4A4IF30 521 aa5.76□□□□□ -1.49
CD44-204ENST00000279452 OR6C65A6NJZ3 312 aa5.76□□□□□ -1.49
CD44-204ENST00000279452 MS4A18H0YCH9 400 aa5.76□□□□□ -1.49
CD44-204ENST00000279452 GNGT2O14610 69 aa5.76□□□□□ -1.49
CD44-204ENST00000279452 CLOCKO15516 846 aa5.76□□□□□ -1.49
CD44-204ENST00000279452 TRAF3IP2O43734 574 aaPredicted RBP5.76□□□□□ -1.49
CD44-204ENST00000279452 OR10H3O60404 316 aa5.76□□□□□ -1.49
CD44-204ENST00000279452 UPK3AO75631 287 aa5.76□□□□□ -1.49
CD44-204ENST00000279452 CIB2O75838 187 aa5.76□□□□□ -1.49
CD44-204ENST00000279452 ATP5HO75947 161 aa5.76□□□□□ -1.49
CD44-204ENST00000279452 SEC14L2O76054 403 aa5.76□□□□□ -1.49
CD44-204ENST00000279452 CNOT4O95628 575 aaKnown RBP5.76□□□□□ -1.49
CD44-204ENST00000279452 BCL10O95999 233 aa5.76□□□□□ -1.49
CD44-204ENST00000279452 FREM3P0C091 2139 aa5.76□□□□□ -1.49
CD44-204ENST00000279452 ASAH2BP0C7U1 165 aa5.76□□□□□ -1.49
CD44-204ENST00000279452 COX5AP20674 150 aa5.76□□□□□ -1.49
CD44-204ENST00000279452 MAKP20794 623 aa5.76□□□□□ -1.49
CD44-204ENST00000279452 FUT4P22083 530 aa5.76□□□□□ -1.49
CD44-204ENST00000279452 MPGP29372 298 aa5.76□□□□□ -1.49
CD44-204ENST00000279452 NTF4P34130 210 aa5.76□□□□□ -1.49
CD44-204ENST00000279452 AQP2P41181 271 aa5.76□□□□□ -1.49
CD44-204ENST00000279452 CSNK1A1P48729 337 aa5.76□□□□□ -1.49
CD44-204ENST00000279452 DAP3P51398 398 aaKnown RBP5.76□□□□□ -1.49
CD44-204ENST00000279452 SMIM11AP58511 58 aa5.76□□□□□ -1.49
CD44-204ENST00000279452 UBE2NP61088 152 aaKnown RBP5.76□□□□□ -1.49
CD44-204ENST00000279452 LSM11P83369 360 aaKnown RBP eCLIP5.76□□□□□ -1.49
CD44-204ENST00000279452 MS4A2Q01362 244 aa5.76□□□□□ -1.49
CD44-204ENST00000279452 ROR2Q01974 943 aaKnown RBP5.76□□□□□ -1.49
CD44-204ENST00000279452 BNIP1Q12981 228 aa5.76□□□□□ -1.49
CD44-204ENST00000279452 PPA1Q15181 289 aa5.76□□□□□ -1.49
CD44-204ENST00000279452 TAB1Q15750 504 aa5.76□□□□□ -1.49
CD44-204ENST00000279452 FXNQ16595 210 aa5.76□□□□□ -1.49
CD44-204ENST00000279452 MS4A18Q3C1V0 323 aa5.76□□□□□ -1.49
CD44-204ENST00000279452 ALG10Q5BKT4 473 aa5.76□□□□□ -1.49
CD44-204ENST00000279452 PODNL1Q6PEZ8 512 aa5.76□□□□□ -1.49
CD44-204ENST00000279452 SLC46A3Q7Z3Q1 461 aa5.76□□□□□ -1.49
CD44-204ENST00000279452 PXKQ7Z7A4 578 aa5.76□□□□□ -1.49
CD44-204ENST00000279452 OAFQ86UD1 273 aa5.76□□□□□ -1.49
CD44-204ENST00000279452 ZNF295-AS1Q8N0V1 137 aa5.76□□□□□ -1.49
CD44-204ENST00000279452 ZNF433Q8N7K0 673 aaPredicted RBP5.76□□□□□ -1.49
CD44-204ENST00000279452 ZIC4Q8N9L1 334 aa5.76□□□□□ -1.49
CD44-204ENST00000279452 ACBD4Q8NC06 268 aa5.76□□□□□ -1.49
CD44-204ENST00000279452 OR4K5Q8NGD3 323 aa5.76□□□□□ -1.49
CD44-204ENST00000279452 MOSPD2Q8NHP6 518 aa5.76□□□□□ -1.49
CD44-204ENST00000279452 SLC7A13Q8TCU3 470 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms