RNA–Protein interactions for RNA: ENST00000272322.8

VPS54-201, Transcript of VPS54, GARP complex subunit, humanhuman

APPRIS P3 TSL 5 BASIC

Gene VPS54, Length 3,463 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS54-201ENST00000272322 FAM157BP0CG42 384 aa15.14■□□□□ 0.01
VPS54-201ENST00000272322 PRKCAP17252 672 aa15.14■□□□□ 0.01
VPS54-201ENST00000272322 GDNFP39905 211 aa15.14■□□□□ 0.01
VPS54-201ENST00000272322 GZMKP49863 264 aa15.14■□□□□ 0.01
VPS54-201ENST00000272322 UBE2MP61081 183 aaKnown RBP15.14■□□□□ 0.01
VPS54-201ENST00000272322 HLA-DQA1Q5Y7H0 255 aa15.14■□□□□ 0.01
VPS54-201ENST00000272322 HIST3H2AQ7L7L0 130 aa15.14■□□□□ 0.01
VPS54-201ENST00000272322 OR6V1Q8N148 313 aa15.14■□□□□ 0.01
VPS54-201ENST00000272322 SMRP1Q8NCR6 262 aa15.14■□□□□ 0.01
VPS54-201ENST00000272322 OR52I2Q8NH67 350 aa15.14■□□□□ 0.01
VPS54-201ENST00000272322 HIST1H2ACQ93077 130 aa15.14■□□□□ 0.01
VPS54-201ENST00000272322 TAAR8Q969N4 342 aa15.14■□□□□ 0.01
VPS54-201ENST00000272322 KIAA1143Q96AT1 154 aaPredicted RBP15.14■□□□□ 0.01
VPS54-201ENST00000272322 FBRSQ9HAH7 460 aa15.14■□□□□ 0.01
VPS54-201ENST00000272322 TCF7L1Q9HCS4 588 aa15.14■□□□□ 0.01
VPS54-201ENST00000272322 LAMP5Q9UJQ1 280 aa15.14■□□□□ 0.01
VPS54-201ENST00000272322 ZNF337Q9Y3M9 751 aa15.14■□□□□ 0.01
VPS54-201ENST00000272322 SLC43A1O75387 559 aa15.14■□□□□ 0.01
VPS54-201ENST00000272322 CAPZBP47756 277 aa15.14■□□□□ 0.01
VPS54-201ENST00000272322 GALK2Q01415 458 aa15.14■□□□□ 0.01
VPS54-201ENST00000272322 PTPMT1Q8WUK0 201 aaPredicted RBP15.14■□□□□ 0.01
VPS54-201ENST00000272322 ACOT12Q8WYK0 555 aa15.14■□□□□ 0.01
VPS54-201ENST00000272322 NSMAFQ92636 917 aa15.14■□□□□ 0.01
VPS54-201ENST00000272322 SLC23A1Q9UHI7 598 aa15.14■□□□□ 0.01
VPS54-201ENST00000272322 TRABD2BA6NFA1 517 aa15.13■□□□□ 0.01
VPS54-201ENST00000272322 FMO6PO60774 539 aa15.13■□□□□ 0.01
VPS54-201ENST00000272322 ARL6IP5O75915 188 aa15.13■□□□□ 0.01
VPS54-201ENST00000272322 OR7A10O76100 309 aa15.13■□□□□ 0.01
VPS54-201ENST00000272322 HPXP02790 462 aa15.13■□□□□ 0.01
VPS54-201ENST00000272322 CD38P28907 300 aa15.13■□□□□ 0.01
VPS54-201ENST00000272322 EIF1AXP47813 144 aaKnown RBP15.13■□□□□ 0.01
VPS54-201ENST00000272322 ACTC1P68032 377 aa15.13■□□□□ 0.01
VPS54-201ENST00000272322 ACTA1P68133 377 aa15.13■□□□□ 0.01
VPS54-201ENST00000272322 EGR4Q05215 589 aa15.13■□□□□ 0.01
VPS54-201ENST00000272322 SLC36A2Q495M3 483 aa15.13■□□□□ 0.01
VPS54-201ENST00000272322 DUSP18Q8NEJ0 188 aa15.13■□□□□ 0.01
VPS54-201ENST00000272322 OR11H7Q8NGC8 314 aa15.13■□□□□ 0.01
VPS54-201ENST00000272322 NPAS1Q99742 590 aa15.13■□□□□ 0.01
VPS54-201ENST00000272322 DPAGT1Q9H3H5 408 aa15.13■□□□□ 0.01
VPS54-201ENST00000272322 KCNG2Q9UJ96 466 aa15.13■□□□□ 0.01
VPS54-201ENST00000272322 SLC22A13Q9Y226 551 aa15.13■□□□□ 0.01
VPS54-201ENST00000272322 H0YIG0 161 aa15.13■□□□□ 0.01
VPS54-201ENST00000272322 AKR7A3O95154 331 aa15.13■□□□□ 0.01
VPS54-201ENST00000272322 IL12BP29460 328 aa15.13■□□□□ 0.01
VPS54-201ENST00000272322 BTCP35070 178 aa15.13■□□□□ 0.01
VPS54-201ENST00000272322 EFNA3P52797 238 aa15.13■□□□□ 0.01
VPS54-201ENST00000272322 SLC25A25Q6KCM7 469 aa15.13■□□□□ 0.01
VPS54-201ENST00000272322 LSMEM1Q8N8F7 131 aa15.13■□□□□ 0.01
VPS54-201ENST00000272322 OR8S1Q8NH09 359 aa15.13■□□□□ 0.01
VPS54-201ENST00000272322 GIMAP1Q8WWP7 306 aa15.13■□□□□ 0.01
VPS54-201ENST00000272322 LMF2Q9BU23 707 aaKnown RBP15.13■□□□□ 0.01
VPS54-201ENST00000272322 EIF1AYO14602 144 aaKnown RBP15.13■□□□□ 0.01
VPS54-201ENST00000272322 ZNF264O43296 627 aa15.13■□□□□ 0.01
VPS54-201ENST00000272322 NDUFB5O43674 189 aa15.13■□□□□ 0.01
VPS54-201ENST00000272322 MPZL1O95297 269 aa15.13■□□□□ 0.01
VPS54-201ENST00000272322 CXCR1P25024 350 aa15.13■□□□□ 0.01
VPS54-201ENST00000272322 TAS2R43P59537 309 aa15.13■□□□□ 0.01
VPS54-201ENST00000272322 RAB30Q15771 203 aa15.13■□□□□ 0.01
VPS54-201ENST00000272322 PYHIN1Q6K0P9 492 aa15.13■□□□□ 0.01
VPS54-201ENST00000272322 ZNF595Q8IYB9 648 aa15.13■□□□□ 0.01
VPS54-201ENST00000272322 ZNF615Q8N8J6 731 aa15.13■□□□□ 0.01
VPS54-201ENST00000272322 ZNF527Q8NB42 609 aa15.13■□□□□ 0.01
VPS54-201ENST00000272322 RGP1Q92546 391 aaPredicted RBP15.13■□□□□ 0.01
VPS54-201ENST00000272322 TBL1XR1Q9BZK7 514 aa15.13■□□□□ 0.01
VPS54-201ENST00000272322 TMEM185BQ9H7F4 350 aa15.13■□□□□ 0.01
VPS54-201ENST00000272322 FSCN3Q9NQT6 498 aa15.13■□□□□ 0.01
VPS54-201ENST00000272322 CUTCQ9NTM9 273 aa15.13■□□□□ 0.01
VPS54-201ENST00000272322 VDAC3Q9Y277 283 aa15.13■□□□□ 0.01
VPS54-201ENST00000272322 FKBP7Q9Y680 259 aa15.13■□□□□ 0.01
VPS54-201ENST00000272322 VEGFCP49767 419 aa15.12■□□□□ 0.01
VPS54-201ENST00000272322 SYNPRQ8TBG9 265 aa15.12■□□□□ 0.01
VPS54-201ENST00000272322 ASB12Q8WXK4 309 aa15.12■□□□□ 0.01
VPS54-201ENST00000272322 SEC22CQ9BRL7 303 aa15.12■□□□□ 0.01
VPS54-201ENST00000272322 ZNF426Q9BUY5 554 aa15.12■□□□□ 0.01
VPS54-201ENST00000272322 NRIP3Q9NQ35 241 aa15.12■□□□□ 0.01
VPS54-201ENST00000272322 UBQLN4Q9NRR5 601 aa15.12■□□□□ 0.01
VPS54-201ENST00000272322 COQ3Q9NZJ6 369 aa15.12■□□□□ 0.01
VPS54-201ENST00000272322 SPARCP09486 303 aa15.12■□□□□ 0.01
VPS54-201ENST00000272322 DCTDP32321 178 aa15.12■□□□□ 0.01
VPS54-201ENST00000272322 ELOCQ15369 112 aa15.12■□□□□ 0.01
VPS54-201ENST00000272322 DPY19L2P2Q6ZN68 376 aa15.12■□□□□ 0.01
VPS54-201ENST00000272322 PIAS4Q8N2W9 510 aaPredicted RBP15.12■□□□□ 0.01
VPS54-201ENST00000272322 OR11H4Q8NGC9 324 aa15.12■□□□□ 0.01
VPS54-201ENST00000272322 DUSP19Q8WTR2 217 aa15.12■□□□□ 0.01
VPS54-201ENST00000272322 WDR89Q96FK6 387 aaPredicted RBP15.12■□□□□ 0.01
VPS54-201ENST00000272322 TCTN2Q96GX1 697 aa15.12■□□□□ 0.01
VPS54-201ENST00000272322 NUDT9Q9BW91 350 aa15.12■□□□□ 0.01
VPS54-201ENST00000272322 THADAQ6YHU6 1953 aa15.12■□□□□ 0.01
VPS54-201ENST00000272322 ERVH48-1M5A8F1 160 aa15.12■□□□□ 0.01
VPS54-201ENST00000272322 SRPX2O60687 465 aaPredicted RBP15.12■□□□□ 0.01
VPS54-201ENST00000272322 NSA2O95478 260 aaKnown RBP15.12■□□□□ 0.01
VPS54-201ENST00000272322 RBMS1P29558 406 aaKnown RBP15.12■□□□□ 0.01
VPS54-201ENST00000272322 FAM220AQ7Z4H9 259 aa15.12■□□□□ 0.01
VPS54-201ENST00000272322 PXKQ7Z7A4 578 aa15.12■□□□□ 0.01
VPS54-201ENST00000272322 ZNF431Q8TF32 576 aaPredicted RBP15.12■□□□□ 0.01
VPS54-201ENST00000272322 TMEM106AQ96A25 262 aa15.12■□□□□ 0.01
VPS54-201ENST00000272322 GFI1Q99684 422 aa15.12■□□□□ 0.01
VPS54-201ENST00000272322 PLCL2Q9UPR0 1127 aa15.12■□□□□ 0.01
VPS54-201ENST00000272322 TRAV8-7A0A075B6U6 113 aa15.11■□□□□ 0.01
VPS54-201ENST00000272322 TEX46H3BTG2 121 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms