RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 TMEM176BQ3YBM2 270 aaPredicted RBP12.69□□□□□ -0.38
SS18-201ENST00000269137 RAET1LQ5VY80 246 aa12.69□□□□□ -0.38
SS18-201ENST00000269137 LSM14AQ8ND56 463 aaKnown RBP12.69□□□□□ -0.38
SS18-201ENST00000269137 SDR9C7Q8NEX9 313 aa12.69□□□□□ -0.38
SS18-201ENST00000269137 PROKR2Q8NFJ6 384 aa12.69□□□□□ -0.38
SS18-201ENST00000269137 HAS2Q92819 552 aa12.69□□□□□ -0.38
SS18-201ENST00000269137 KISS1RQ969F8 398 aaPredicted RBP12.69□□□□□ -0.38
SS18-201ENST00000269137 TSPAN32Q96QS1 320 aa12.69□□□□□ -0.38
SS18-201ENST00000269137 NMNAT3Q96T66 252 aa12.69□□□□□ -0.38
SS18-201ENST00000269137 JAM3Q9BX67 310 aa12.69□□□□□ -0.38
SS18-201ENST00000269137 OR2B2Q9GZK3 357 aa12.69□□□□□ -0.38
SS18-201ENST00000269137 TXNIPQ9H3M7 391 aa12.69□□□□□ -0.38
SS18-201ENST00000269137 ERGIC3Q9Y282 383 aa12.69□□□□□ -0.38
SS18-201ENST00000269137 PINLYPA6NC86 204 aa12.68□□□□□ -0.38
SS18-201ENST00000269137 OR6C68A6NDL8 312 aa12.68□□□□□ -0.38
SS18-201ENST00000269137 NPIPB13A6NJU9 1138 aa12.68□□□□□ -0.38
SS18-201ENST00000269137 NPIPB4C9JG80 1138 aa12.68□□□□□ -0.38
SS18-201ENST00000269137 MS4A18H0YCH9 400 aa12.68□□□□□ -0.38
SS18-201ENST00000269137 J3QRE1 110 aa12.68□□□□□ -0.38
SS18-201ENST00000269137 PTHP01270 115 aa12.68□□□□□ -0.38
SS18-201ENST00000269137 LCKP06239 509 aa12.68□□□□□ -0.38
SS18-201ENST00000269137 RFPL3SP0C7P2 107 aa12.68□□□□□ -0.38
SS18-201ENST00000269137 CDKN2AP42771 156 aaKnown RBP12.68□□□□□ -0.38
SS18-201ENST00000269137 SLC25A1P53007 311 aa12.68□□□□□ -0.38
SS18-201ENST00000269137 RAC1P63000 192 aa12.68□□□□□ -0.38
SS18-201ENST00000269137 TLE3Q04726 772 aa12.68□□□□□ -0.38
SS18-201ENST00000269137 LGALS3BPQ08380 585 aa12.68□□□□□ -0.38
SS18-201ENST00000269137 FOXC1Q12948 553 aa12.68□□□□□ -0.38
SS18-201ENST00000269137 ZNF239Q16600 458 aaKnown RBP12.68□□□□□ -0.38
SS18-201ENST00000269137 MS4A18Q3C1V0 323 aa12.68□□□□□ -0.38
SS18-201ENST00000269137 KLHL12Q53G59 568 aa12.68□□□□□ -0.38
SS18-201ENST00000269137 ZNF367Q7RTV3 350 aa12.68□□□□□ -0.38
SS18-201ENST00000269137 JAZF1Q86VZ6 243 aa12.68□□□□□ -0.38
SS18-201ENST00000269137 CLVS1Q8IUQ0 354 aaPredicted RBP12.68□□□□□ -0.38
SS18-201ENST00000269137 ARIH2OSQ8N7S6 290 aa12.68□□□□□ -0.38
SS18-201ENST00000269137 ZNF248Q8NDW4 579 aa12.68□□□□□ -0.38
SS18-201ENST00000269137 ZNF420Q8TAQ5 688 aaPredicted RBP12.68□□□□□ -0.38
SS18-201ENST00000269137 MIB2Q96AX9 1013 aa12.68□□□□□ -0.38
SS18-201ENST00000269137 OR5B2Q96R09 309 aa12.68□□□□□ -0.38
SS18-201ENST00000269137 SNX18Q96RF0 628 aa12.68□□□□□ -0.38
SS18-201ENST00000269137 OR51V1Q9H2C8 321 aa12.68□□□□□ -0.38
SS18-201ENST00000269137 TMEM185BQ9H7F4 350 aa12.68□□□□□ -0.38
SS18-201ENST00000269137 TAS2R16Q9NYV7 291 aa12.68□□□□□ -0.38
SS18-201ENST00000269137 ZNF346Q9UL40 294 aaKnown RBP12.68□□□□□ -0.38
SS18-201ENST00000269137 EXOSC1Q9Y3B2 195 aaKnown RBP12.68□□□□□ -0.38
SS18-201ENST00000269137 C11orf98E9PRG8 122 aa12.67□□□□□ -0.38
SS18-201ENST00000269137 NME2P1O60361 137 aa12.67□□□□□ -0.38
SS18-201ENST00000269137 IGHA1P01876 353 aa12.67□□□□□ -0.38
SS18-201ENST00000269137 SP1P08047 785 aa12.67□□□□□ -0.38
SS18-201ENST00000269137 NME2P22392 152 aa12.67□□□□□ -0.38
SS18-201ENST00000269137 AHCYP23526 432 aa12.67□□□□□ -0.38
SS18-201ENST00000269137 PSMB9P28065 219 aa12.67□□□□□ -0.38
SS18-201ENST00000269137 SHC1P29353 583 aa12.67□□□□□ -0.38
SS18-201ENST00000269137 RPL27P61353 136 aaKnown RBP12.67□□□□□ -0.38
SS18-201ENST00000269137 KRR1Q13601 381 aaKnown RBP12.67□□□□□ -0.38
SS18-201ENST00000269137 ACKR1Q16570 336 aa12.67□□□□□ -0.38
SS18-201ENST00000269137 SLC35D3Q5M8T2 416 aa12.67□□□□□ -0.38
SS18-201ENST00000269137 SLC25A25Q6KCM7 469 aa12.67□□□□□ -0.38
SS18-201ENST00000269137 TMPPEQ6ZT21 453 aa12.67□□□□□ -0.38
SS18-201ENST00000269137 ADCK1Q86TW2 530 aa12.67□□□□□ -0.38
SS18-201ENST00000269137 SULF2Q8IWU5 870 aa12.67□□□□□ -0.38
SS18-201ENST00000269137 NANOGP1Q8N7R0 232 aa12.67□□□□□ -0.38
SS18-201ENST00000269137 KCNE4Q8WWG9 221 aa12.67□□□□□ -0.38
SS18-201ENST00000269137 COG8Q96MW5 612 aa12.67□□□□□ -0.38
SS18-201ENST00000269137 RSL24D1Q9UHA3 163 aaKnown RBP12.67□□□□□ -0.38
SS18-201ENST00000269137 CLEC2DQ9UHP7 191 aa12.67□□□□□ -0.38
SS18-201ENST00000269137 WASF3Q9UPY6 502 aa12.67□□□□□ -0.38
SS18-201ENST00000269137 KLF13Q9Y2Y9 288 aaPredicted RBP12.67□□□□□ -0.38
SS18-201ENST00000269137 LSM2Q9Y333 95 aaKnown RBP12.67□□□□□ -0.38
SS18-201ENST00000269137 A0A1W2PNV4 684 aa12.67□□□□□ -0.38
SS18-201ENST00000269137 A0A1W2PRG6 482 aa12.67□□□□□ -0.38
SS18-201ENST00000269137 GJE1A6NN92 205 aa12.67□□□□□ -0.38
SS18-201ENST00000269137 TRMUO75648 421 aaKnown RBP12.67□□□□□ -0.38
SS18-201ENST00000269137 PMS2P2O95744 297 aa12.67□□□□□ -0.38
SS18-201ENST00000269137 CLUP10909 449 aa12.67□□□□□ -0.38
SS18-201ENST00000269137 CD46P15529 392 aa12.67□□□□□ -0.38
SS18-201ENST00000269137 MYL12AP19105 171 aa12.67□□□□□ -0.38
SS18-201ENST00000269137 SFTPDP35247 375 aa12.67□□□□□ -0.38
SS18-201ENST00000269137 ATP6V1E1P36543 226 aa12.67□□□□□ -0.38
SS18-201ENST00000269137 TMBIM6P55061 237 aa12.67□□□□□ -0.38
SS18-201ENST00000269137 OR2B6P58173 313 aa12.67□□□□□ -0.38
SS18-201ENST00000269137 SLC35A1P78382 337 aa12.67□□□□□ -0.38
SS18-201ENST00000269137 TOMM20Q15388 145 aa12.67□□□□□ -0.38
SS18-201ENST00000269137 MESTQ5EB52 335 aa12.67□□□□□ -0.38
SS18-201ENST00000269137 GPR107Q5VW38 600 aa12.67□□□□□ -0.38
SS18-201ENST00000269137 LEG1Q6P5S2 330 aa12.67□□□□□ -0.38
SS18-201ENST00000269137 IGFL2Q6UWQ7 119 aa12.67□□□□□ -0.38
SS18-201ENST00000269137 PXKQ7Z7A4 578 aa12.67□□□□□ -0.38
SS18-201ENST00000269137 EXD3Q8N9H8 876 aa12.67□□□□□ -0.38
SS18-201ENST00000269137 FAM83FQ8NEG4 500 aaPredicted RBP12.67□□□□□ -0.38
SS18-201ENST00000269137 OR4F15Q8NGB8 312 aa12.67□□□□□ -0.38
SS18-201ENST00000269137 ZNF519Q8TB69 540 aa12.67□□□□□ -0.38
SS18-201ENST00000269137 RELTQ969Z4 430 aa12.67□□□□□ -0.38
SS18-201ENST00000269137 DOK1Q99704 481 aa12.67□□□□□ -0.38
SS18-201ENST00000269137 MND1Q9BWT6 205 aa12.67□□□□□ -0.38
SS18-201ENST00000269137 HES7Q9BYE0 225 aa12.67□□□□□ -0.38
SS18-201ENST00000269137 RACGAP1Q9H0H5 632 aa12.67□□□□□ -0.38
SS18-201ENST00000269137 CHCHD3Q9NX63 227 aaKnown RBP12.67□□□□□ -0.38
SS18-201ENST00000269137 TNFRSF10DQ9UBN6 386 aa12.67□□□□□ -0.38
SS18-201ENST00000269137 B4GALT7Q9UBV7 327 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms