RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 NOS3P29474 1203 aa15.71■□□□□ 0.11
SRSF1-201ENST00000258962 HTR1FP30939 366 aa15.71■□□□□ 0.11
SRSF1-201ENST00000258962 MTNR1AP48039 350 aa15.71■□□□□ 0.11
SRSF1-201ENST00000258962 CYB561P49447 251 aa15.71■□□□□ 0.11
SRSF1-201ENST00000258962 ERVK-25P63136 954 aa15.71■□□□□ 0.11
SRSF1-201ENST00000258962 RPL18Q07020 188 aaKnown RBP15.71■□□□□ 0.11
SRSF1-201ENST00000258962 DOC2BQ14184 412 aa15.71■□□□□ 0.11
SRSF1-201ENST00000258962 FAM69AQ5T7M9 428 aa15.71■□□□□ 0.11
SRSF1-201ENST00000258962 TUBA3EQ6PEY2 450 aa15.71■□□□□ 0.11
SRSF1-201ENST00000258962 C5orf46Q6UWT4 87 aa15.71■□□□□ 0.11
SRSF1-201ENST00000258962 SLC37A3Q8NCC5 494 aa15.71■□□□□ 0.11
SRSF1-201ENST00000258962 RFKQ969G6 155 aa15.71■□□□□ 0.11
SRSF1-201ENST00000258962 RELTQ969Z4 430 aa15.71■□□□□ 0.11
SRSF1-201ENST00000258962 SGCZQ96LD1 299 aa15.71■□□□□ 0.11
SRSF1-201ENST00000258962 DOK1Q99704 481 aa15.71■□□□□ 0.11
SRSF1-201ENST00000258962 KATNB1Q9BVA0 655 aa15.71■□□□□ 0.11
SRSF1-201ENST00000258962 FGF20Q9NP95 211 aaPredicted RBP15.71■□□□□ 0.11
SRSF1-201ENST00000258962 KLHL1Q9NR64 748 aa15.71■□□□□ 0.11
SRSF1-201ENST00000258962 DIMT1Q9UNQ2 313 aaKnown RBP15.71■□□□□ 0.11
SRSF1-201ENST00000258962 NCKAP5O14513 1909 aa15.7■□□□□ 0.1
SRSF1-201ENST00000258962 CCDC182A6NF36 153 aa15.7■□□□□ 0.1
SRSF1-201ENST00000258962 PRR23D1E9PI22 279 aaPredicted RBP15.7■□□□□ 0.1
SRSF1-201ENST00000258962 M0R3G1 203 aa15.7■□□□□ 0.1
SRSF1-201ENST00000258962 ZNF208O43345 1280 aa15.7■□□□□ 0.1
SRSF1-201ENST00000258962 AHSA1O95433 338 aa15.7■□□□□ 0.1
SRSF1-201ENST00000258962 RAB36O95755 333 aa15.7■□□□□ 0.1
SRSF1-201ENST00000258962 PRR23D2P0DMB1 279 aaPredicted RBP15.7■□□□□ 0.1
SRSF1-201ENST00000258962 CD46P15529 392 aa15.7■□□□□ 0.1
SRSF1-201ENST00000258962 HIST1H1CP16403 213 aaKnown RBP15.7■□□□□ 0.1
SRSF1-201ENST00000258962 ZNF3P17036 446 aa15.7■□□□□ 0.1
SRSF1-201ENST00000258962 SLC2A5P22732 501 aa15.7■□□□□ 0.1
SRSF1-201ENST00000258962 FOXK1P85037 733 aa15.7■□□□□ 0.1
SRSF1-201ENST00000258962 RAB40BQ12829 278 aa15.7■□□□□ 0.1
SRSF1-201ENST00000258962 OR1C1Q15619 314 aa15.7■□□□□ 0.1
SRSF1-201ENST00000258962 KLHL22Q53GT1 634 aa15.7■□□□□ 0.1
SRSF1-201ENST00000258962 ALG10Q5BKT4 473 aa15.7■□□□□ 0.1
SRSF1-201ENST00000258962 RNLSQ5VYX0 342 aa15.7■□□□□ 0.1
SRSF1-201ENST00000258962 MAMDC2Q7Z304 686 aaPredicted RBP15.7■□□□□ 0.1
SRSF1-201ENST00000258962 FAM122BQ7Z309 247 aa15.7■□□□□ 0.1
SRSF1-201ENST00000258962 ATCAYQ86WG3 371 aa15.7■□□□□ 0.1
SRSF1-201ENST00000258962 GID4Q8IVV7 300 aa15.7■□□□□ 0.1
SRSF1-201ENST00000258962 CYB561A3Q8NBI2 242 aa15.7■□□□□ 0.1
SRSF1-201ENST00000258962 SDR9C7Q8NEX9 313 aa15.7■□□□□ 0.1
SRSF1-201ENST00000258962 OR52E2Q8NGJ4 325 aa15.7■□□□□ 0.1
SRSF1-201ENST00000258962 KISS1RQ969F8 398 aaPredicted RBP15.7■□□□□ 0.1
SRSF1-201ENST00000258962 OTULINQ96BN8 352 aa15.7■□□□□ 0.1
SRSF1-201ENST00000258962 SNRNP40Q96DI7 357 aaKnown RBP15.7■□□□□ 0.1
SRSF1-201ENST00000258962 ARL5BQ96KC2 179 aa15.7■□□□□ 0.1
SRSF1-201ENST00000258962 C5orf34Q96MH7 638 aa15.7■□□□□ 0.1
SRSF1-201ENST00000258962 LRFN1Q9P244 771 aa15.7■□□□□ 0.1
SRSF1-201ENST00000258962 CLEC2DQ9UHP7 191 aa15.7■□□□□ 0.1
SRSF1-201ENST00000258962 KLHL21Q9UJP4 597 aa15.7■□□□□ 0.1
SRSF1-201ENST00000258962 A0A0G2JMM0 328 aa15.69■□□□□ 0.1
SRSF1-201ENST00000258962 A0A1W2PPB8 328 aa15.69■□□□□ 0.1
SRSF1-201ENST00000258962 A0A1W2PRS3 328 aa15.69■□□□□ 0.1
SRSF1-201ENST00000258962 KIR3DP1A8MWS1 328 aa15.69■□□□□ 0.1
SRSF1-201ENST00000258962 M0R082 166 aa15.69■□□□□ 0.1
SRSF1-201ENST00000258962 IFNGP01579 166 aa15.69■□□□□ 0.1
SRSF1-201ENST00000258962 CD14P08571 375 aa15.69■□□□□ 0.1
SRSF1-201ENST00000258962 TCEA1P23193 301 aaKnown RBP15.69■□□□□ 0.1
SRSF1-201ENST00000258962 PAX7P23759 505 aa15.69■□□□□ 0.1
SRSF1-201ENST00000258962 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.69■□□□□ 0.1
SRSF1-201ENST00000258962 IGFBP7Q16270 282 aa15.69■□□□□ 0.1
SRSF1-201ENST00000258962 SGCBQ16585 318 aa15.69■□□□□ 0.1
SRSF1-201ENST00000258962 PRR30Q53SZ7 412 aaPredicted RBP15.69■□□□□ 0.1
SRSF1-201ENST00000258962 ZNF766Q5HY98 468 aa15.69■□□□□ 0.1
SRSF1-201ENST00000258962 RPUSD3Q6P087 351 aaKnown RBP15.69■□□□□ 0.1
SRSF1-201ENST00000258962 MEPCEQ7L2J0 689 aaKnown RBP15.69■□□□□ 0.1
SRSF1-201ENST00000258962 SHFQ7M4L6 423 aa15.69■□□□□ 0.1
SRSF1-201ENST00000258962 OR6S1Q8NH40 331 aa15.69■□□□□ 0.1
SRSF1-201ENST00000258962 OR4K13Q8NH42 304 aa15.69■□□□□ 0.1
SRSF1-201ENST00000258962 SLC25A36Q96CQ1 311 aa15.69■□□□□ 0.1
SRSF1-201ENST00000258962 RASD2Q96D21 266 aa15.69■□□□□ 0.1
SRSF1-201ENST00000258962 YIPF6Q96EC8 236 aa15.69■□□□□ 0.1
SRSF1-201ENST00000258962 TMEM41AQ96HV5 264 aa15.69■□□□□ 0.1
SRSF1-201ENST00000258962 DDOQ99489 341 aa15.69■□□□□ 0.1
SRSF1-201ENST00000258962 FUNDC2Q9BWH2 189 aa15.69■□□□□ 0.1
SRSF1-201ENST00000258962 PTGES2Q9H7Z7 377 aa15.69■□□□□ 0.1
SRSF1-201ENST00000258962 TAS2R5Q9NYW4 299 aa15.69■□□□□ 0.1
SRSF1-201ENST00000258962 LSM2Q9Y333 95 aaKnown RBP15.69■□□□□ 0.1
SRSF1-201ENST00000258962 SLC6A5Q9Y345 797 aa15.69■□□□□ 0.1
SRSF1-201ENST00000258962 FAM47E-STBD1D6RA91 191 aa15.68■□□□□ 0.1
SRSF1-201ENST00000258962 PYCARD-AS1I3L0S3 204 aa15.68■□□□□ 0.1
SRSF1-201ENST00000258962 IDH3BO43837 385 aa15.68■□□□□ 0.1
SRSF1-201ENST00000258962 TRIM3O75382 744 aaPredicted RBP15.68■□□□□ 0.1
SRSF1-201ENST00000258962 HIST1H2ABP04908 130 aa15.68■□□□□ 0.1
SRSF1-201ENST00000258962 F13BP05160 661 aa15.68■□□□□ 0.1
SRSF1-201ENST00000258962 CLUP10909 449 aa15.68■□□□□ 0.1
SRSF1-201ENST00000258962 APEHP13798 732 aaKnown RBP15.68■□□□□ 0.1
SRSF1-201ENST00000258962 GRPRP30550 384 aa15.68■□□□□ 0.1
SRSF1-201ENST00000258962 TGFBR2P37173 567 aa15.68■□□□□ 0.1
SRSF1-201ENST00000258962 CTXN1P60606 82 aa15.68■□□□□ 0.1
SRSF1-201ENST00000258962 LSAMPQ13449 338 aa15.68■□□□□ 0.1
SRSF1-201ENST00000258962 SPINK14Q6IE38 97 aa15.68■□□□□ 0.1
SRSF1-201ENST00000258962 PAQR6Q6TCH4 344 aa15.68■□□□□ 0.1
SRSF1-201ENST00000258962 FAM180AQ6UWF9 173 aa15.68■□□□□ 0.1
SRSF1-201ENST00000258962 SLC16A12Q6ZSM3 486 aa15.68■□□□□ 0.1
SRSF1-201ENST00000258962 HIST3H2AQ7L7L0 130 aa15.68■□□□□ 0.1
SRSF1-201ENST00000258962 ZNF367Q7RTV3 350 aa15.68■□□□□ 0.1
SRSF1-201ENST00000258962 GPALPP1Q8IXQ4 340 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms