RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 ST8SIA6P61647 398 aa10.53□□□□□ -0.72
TROAP-201ENST00000257909 DPTQ07507 201 aa10.53□□□□□ -0.72
TROAP-201ENST00000257909 SRSF4Q08170 494 aaKnown RBP10.53□□□□□ -0.72
TROAP-201ENST00000257909 Q499Y3 187 aa10.53□□□□□ -0.72
TROAP-201ENST00000257909 TMEM215Q68D42 235 aa10.53□□□□□ -0.72
TROAP-201ENST00000257909 C11orf87Q6NUJ2 197 aa10.53□□□□□ -0.72
TROAP-201ENST00000257909 C3orf33Q6P1S2 294 aa10.53□□□□□ -0.72
TROAP-201ENST00000257909 FAM111BQ6SJ93 734 aa10.53□□□□□ -0.72
TROAP-201ENST00000257909 ACOT7LQ6ZUV0 252 aa10.53□□□□□ -0.72
TROAP-201ENST00000257909 SKA3Q8IX90 412 aa10.53□□□□□ -0.72
TROAP-201ENST00000257909 SDR9C7Q8NEX9 313 aa10.53□□□□□ -0.72
TROAP-201ENST00000257909 OR1S2Q8NGQ3 325 aa10.53□□□□□ -0.72
TROAP-201ENST00000257909 OTUB2Q96DC9 234 aa10.53□□□□□ -0.72
TROAP-201ENST00000257909 TNFRSF13CQ96RJ3 184 aa10.53□□□□□ -0.72
TROAP-201ENST00000257909 WDR13Q9H1Z4 485 aa10.53□□□□□ -0.72
TROAP-201ENST00000257909 CCDC86Q9H6F5 360 aaKnown RBP10.53□□□□□ -0.72
TROAP-201ENST00000257909 EDARQ9UNE0 448 aa10.53□□□□□ -0.72
TROAP-201ENST00000257909 LAMA2P24043 3122 aaKnown RBP10.53□□□□□ -0.72
TROAP-201ENST00000257909 IGKV1-8A0A0C4DH67 115 aa10.53□□□□□ -0.72
TROAP-201ENST00000257909 CENPVL1A0A0U1RR11 272 aa10.53□□□□□ -0.72
TROAP-201ENST00000257909 GXYLT2A0PJZ3 443 aa10.53□□□□□ -0.72
TROAP-201ENST00000257909 SLC25A12O75746 678 aa10.53□□□□□ -0.72
TROAP-201ENST00000257909 HEXAP06865 529 aa10.53□□□□□ -0.72
TROAP-201ENST00000257909 OR4E1P0C645 316 aa10.53□□□□□ -0.72
TROAP-201ENST00000257909 SMIM6P0DI80 62 aa10.53□□□□□ -0.72
TROAP-201ENST00000257909 TMIGD3P0DMS9 266 aaPredicted RBP10.53□□□□□ -0.72
TROAP-201ENST00000257909 CERS1P27544 350 aa10.53□□□□□ -0.72
TROAP-201ENST00000257909 BCL6P41182 706 aa10.53□□□□□ -0.72
TROAP-201ENST00000257909 CENPAP49450 140 aa10.53□□□□□ -0.72
TROAP-201ENST00000257909 DIO1P49895 249 aa10.53□□□□□ -0.72
TROAP-201ENST00000257909 GPR143P51810 404 aa10.53□□□□□ -0.72
TROAP-201ENST00000257909 BLOC1S1P78537 153 aa10.53□□□□□ -0.72
TROAP-201ENST00000257909 SREBF2Q12772 1141 aa10.53□□□□□ -0.72
TROAP-201ENST00000257909 SLC6A19Q695T7 634 aa10.53□□□□□ -0.72
TROAP-201ENST00000257909 LIN54Q6MZP7 749 aa10.53□□□□□ -0.72
TROAP-201ENST00000257909 FAM122BQ7Z309 247 aa10.53□□□□□ -0.72
TROAP-201ENST00000257909 ZNF227Q86WZ6 799 aa10.53□□□□□ -0.72
TROAP-201ENST00000257909 NRROSQ86YC3 692 aa10.53□□□□□ -0.72
TROAP-201ENST00000257909 STEAP2Q8NFT2 490 aa10.53□□□□□ -0.72
TROAP-201ENST00000257909 OR7G2Q8NG99 324 aa10.53□□□□□ -0.72
TROAP-201ENST00000257909 OR1J4Q8NGS1 313 aa10.53□□□□□ -0.72
TROAP-201ENST00000257909 OR4K13Q8NH42 304 aa10.53□□□□□ -0.72
TROAP-201ENST00000257909 SLC22A8Q8TCC7 542 aa10.53□□□□□ -0.72
TROAP-201ENST00000257909 RGP1Q92546 391 aaPredicted RBP10.53□□□□□ -0.72
TROAP-201ENST00000257909 ZNF75AQ96N20 296 aa10.53□□□□□ -0.72
TROAP-201ENST00000257909 LGR4Q9BXB1 951 aa10.53□□□□□ -0.72
TROAP-201ENST00000257909 ZNF350Q9GZX5 532 aa10.53□□□□□ -0.72
TROAP-201ENST00000257909 POFUT1Q9H488 388 aa10.53□□□□□ -0.72
TROAP-201ENST00000257909 TMEM27Q9HBJ8 222 aa10.53□□□□□ -0.72
TROAP-201ENST00000257909 MYEF2Q9P2K5 600 aaKnown RBP10.53□□□□□ -0.72
TROAP-201ENST00000257909 CHRNA9Q9UGM1 479 aa10.53□□□□□ -0.72
TROAP-201ENST00000257909 FBXL21Q9UKT6 434 aa10.53□□□□□ -0.72
TROAP-201ENST00000257909 SYNDIG1LA6NDD5 238 aa10.52□□□□□ -0.72
TROAP-201ENST00000257909 OR6C68A6NDL8 312 aa10.52□□□□□ -0.72
TROAP-201ENST00000257909 GGT3PA6NGU5 568 aa10.52□□□□□ -0.72
TROAP-201ENST00000257909 IMPA2O14732 288 aa10.52□□□□□ -0.72
TROAP-201ENST00000257909 GNB5O14775 395 aa10.52□□□□□ -0.72
TROAP-201ENST00000257909 FGF18O76093 207 aa10.52□□□□□ -0.72
TROAP-201ENST00000257909 S100A8P05109 93 aa10.52□□□□□ -0.72
TROAP-201ENST00000257909 HIST1H1CP16403 213 aaKnown RBP10.52□□□□□ -0.72
TROAP-201ENST00000257909 ADCYAP1P18509 176 aa10.52□□□□□ -0.72
TROAP-201ENST00000257909 DUSP5Q16690 384 aa10.52□□□□□ -0.72
TROAP-201ENST00000257909 FAM209BQ5JX69 171 aa10.52□□□□□ -0.72
TROAP-201ENST00000257909 SLC35D3Q5M8T2 416 aa10.52□□□□□ -0.72
TROAP-201ENST00000257909 ANKRD16Q6P6B7 361 aa10.52□□□□□ -0.72
TROAP-201ENST00000257909 ENPP7Q6UWV6 458 aa10.52□□□□□ -0.72
TROAP-201ENST00000257909 TMPRSS12Q86WS5 348 aa10.52□□□□□ -0.72
TROAP-201ENST00000257909 LINC01555Q8NAE3 123 aa10.52□□□□□ -0.72
TROAP-201ENST00000257909 OR51L1Q8NGJ5 315 aa10.52□□□□□ -0.72
TROAP-201ENST00000257909 OR5M8Q8NGP6 311 aa10.52□□□□□ -0.72
TROAP-201ENST00000257909 NXPE3Q969Y0 559 aa10.52□□□□□ -0.72
TROAP-201ENST00000257909 CMSS1Q9BQ75 279 aaKnown RBP10.52□□□□□ -0.72
TROAP-201ENST00000257909 SLC25A21Q9BQT8 299 aaPredicted RBP10.52□□□□□ -0.72
TROAP-201ENST00000257909 CHST6Q9GZX3 395 aa10.52□□□□□ -0.72
TROAP-201ENST00000257909 MYOZ1Q9NP98 299 aaPredicted RBP10.52□□□□□ -0.72
TROAP-201ENST00000257909 USP36Q9P275 1121 aaKnown RBP10.52□□□□□ -0.72
TROAP-201ENST00000257909 MKL2Q9ULH7 1088 aa10.52□□□□□ -0.72
TROAP-201ENST00000257909 OR10H1Q9Y4A9 318 aa10.52□□□□□ -0.72
TROAP-201ENST00000257909 A0A1B0GTI1 187 aa10.52□□□□□ -0.73
TROAP-201ENST00000257909 TMEM82A0PJX8 343 aa10.52□□□□□ -0.73
TROAP-201ENST00000257909 NRG2O14511 850 aaPredicted RBP10.52□□□□□ -0.73
TROAP-201ENST00000257909 RNGTTO60942 597 aaKnown RBP10.52□□□□□ -0.73
TROAP-201ENST00000257909 RDH16O75452 317 aa10.52□□□□□ -0.73
TROAP-201ENST00000257909 EIF3GO75821 320 aaKnown RBP eCLIP10.52□□□□□ -0.73
TROAP-201ENST00000257909 STATHP02808 62 aa10.52□□□□□ -0.73
TROAP-201ENST00000257909 ANXA2P07355 339 aaKnown RBP10.52□□□□□ -0.73
TROAP-201ENST00000257909 ITGB8P26012 769 aa10.52□□□□□ -0.73
TROAP-201ENST00000257909 NANOS3P60323 173 aaKnown RBP10.52□□□□□ -0.73
TROAP-201ENST00000257909 VWA2Q5GFL6 755 aa10.52□□□□□ -0.73
TROAP-201ENST00000257909 METRNLQ641Q3 311 aa10.52□□□□□ -0.73
TROAP-201ENST00000257909 RAB12Q6IQ22 244 aa10.52□□□□□ -0.73
TROAP-201ENST00000257909 H3F3CQ6NXT2 135 aa10.52□□□□□ -0.73
TROAP-201ENST00000257909 STEAP1BQ6NZ63 245 aa10.52□□□□□ -0.73
TROAP-201ENST00000257909 ZNF813Q6ZN06 617 aa10.52□□□□□ -0.73
TROAP-201ENST00000257909 LRRC25Q8N386 305 aaPredicted RBP10.52□□□□□ -0.73
TROAP-201ENST00000257909 OR6S1Q8NH40 331 aa10.52□□□□□ -0.73
TROAP-201ENST00000257909 HSPA12BQ96MM6 686 aa10.52□□□□□ -0.73
TROAP-201ENST00000257909 MACROD1Q9BQ69 325 aa10.52□□□□□ -0.73
TROAP-201ENST00000257909 ZNF559Q9BR84 538 aa10.52□□□□□ -0.73
TROAP-201ENST00000257909 POTEKPQ9BYX7 375 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms