RNA–Protein interactions for RNA: ENST00000257264.3

TCN1-201, Transcript of transcobalamin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TCN1, Length 1,582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCN1-201ENST00000257264 CLEC20AQ6ZU45 233 aa4.4□□□□□ -1.7
TCN1-201ENST00000257264 KCTD8Q6ZWB6 473 aa4.4□□□□□ -1.7
TCN1-201ENST00000257264 GGNQ86UU5 652 aa4.4□□□□□ -1.7
TCN1-201ENST00000257264 PACRGLQ8N7B6 248 aa4.4□□□□□ -1.7
TCN1-201ENST00000257264 Q8N9G6 341 aaPredicted RBP4.4□□□□□ -1.7
TCN1-201ENST00000257264 FAM83FQ8NEG4 500 aaPredicted RBP4.4□□□□□ -1.7
TCN1-201ENST00000257264 OR51G2Q8NGK0 314 aa4.4□□□□□ -1.7
TCN1-201ENST00000257264 FAM45AQ8TCE6 357 aa4.4□□□□□ -1.7
TCN1-201ENST00000257264 MAPK15Q8TD08 544 aa4.4□□□□□ -1.7
TCN1-201ENST00000257264 KCTD4Q8WVF5 259 aa4.4□□□□□ -1.7
TCN1-201ENST00000257264 TMED6Q8WW62 240 aa4.4□□□□□ -1.7
TCN1-201ENST00000257264 PPWD1Q96BP3 646 aaKnown RBP4.4□□□□□ -1.7
TCN1-201ENST00000257264 PPP1R14BQ96C90 147 aa4.4□□□□□ -1.7
TCN1-201ENST00000257264 SMARCD1Q96GM5 515 aa4.4□□□□□ -1.7
TCN1-201ENST00000257264 CAPNS2Q96L46 248 aa4.4□□□□□ -1.7
TCN1-201ENST00000257264 PPP1R36Q96LQ0 422 aa4.4□□□□□ -1.7
TCN1-201ENST00000257264 AGAP4Q96P64 663 aa4.4□□□□□ -1.7
TCN1-201ENST00000257264 GAL3ST1Q99999 423 aa4.4□□□□□ -1.7
TCN1-201ENST00000257264 HOPXQ9BPY8 73 aaPredicted RBP4.4□□□□□ -1.7
TCN1-201ENST00000257264 ULBP1Q9BZM6 244 aa4.4□□□□□ -1.7
TCN1-201ENST00000257264 LRRN3Q9H3W5 708 aa4.4□□□□□ -1.7
TCN1-201ENST00000257264 NXF3Q9H4D5 531 aaKnown RBP4.4□□□□□ -1.7
TCN1-201ENST00000257264 POMKQ9H5K3 350 aa4.4□□□□□ -1.7
TCN1-201ENST00000257264 GPN2Q9H9Y4 310 aaPredicted RBP4.4□□□□□ -1.7
TCN1-201ENST00000257264 POLE4Q9NR33 117 aa4.4□□□□□ -1.7
TCN1-201ENST00000257264 GID8Q9NWU2 228 aa4.4□□□□□ -1.7
TCN1-201ENST00000257264 PDP1Q9P0J1 537 aaPredicted RBP4.4□□□□□ -1.7
TCN1-201ENST00000257264 EIF3LQ9Y262 564 aaKnown RBP4.4□□□□□ -1.7
TCN1-201ENST00000257264 MYRFQ9Y2G1 1151 aa4.4□□□□□ -1.7
TCN1-201ENST00000257264 PPIAL4AQ9Y536 164 aa4.4□□□□□ -1.7
TCN1-201ENST00000257264 GMEB1Q9Y692 573 aa4.4□□□□□ -1.7
TCN1-201ENST00000257264 SELENOKQ9Y6D0 94 aa4.4□□□□□ -1.7
TCN1-201ENST00000257264 PAPPA2Q9BXP8 1791 aa4.4□□□□□ -1.7
TCN1-201ENST00000257264 TSC2P49815 1807 aa4.4□□□□□ -1.71
TCN1-201ENST00000257264 DICER1Q9UPY3 1922 aaKnown RBP4.4□□□□□ -1.71
TCN1-201ENST00000257264 A0A0J9YVX5 310 aa4.4□□□□□ -1.71
TCN1-201ENST00000257264 hCG_38984A0A1B0GV85 526 aa4.4□□□□□ -1.71
TCN1-201ENST00000257264 ZNF879B4DU55 563 aa4.4□□□□□ -1.71
TCN1-201ENST00000257264 C1QTNF3-AMACRE9PGA6 284 aa4.4□□□□□ -1.71
TCN1-201ENST00000257264 ANHXE9PGG2 379 aa4.4□□□□□ -1.71
TCN1-201ENST00000257264 NPIPA7E9PJI5 369 aa4.4□□□□□ -1.71
TCN1-201ENST00000257264 SLC1A7O00341 560 aa4.4□□□□□ -1.71
TCN1-201ENST00000257264 OR7A17O14581 309 aa4.4□□□□□ -1.71
TCN1-201ENST00000257264 ACOT8O14734 319 aa4.4□□□□□ -1.71
TCN1-201ENST00000257264 LSM1O15116 133 aaKnown RBP4.4□□□□□ -1.71
TCN1-201ENST00000257264 PFDN1O60925 122 aa4.4□□□□□ -1.71
TCN1-201ENST00000257264 B3GAT3O94766 335 aa4.4□□□□□ -1.71
TCN1-201ENST00000257264 TOXO94900 526 aa4.4□□□□□ -1.71
TCN1-201ENST00000257264 H6PDO95479 791 aa4.4□□□□□ -1.71
TCN1-201ENST00000257264 ECDO95905 644 aaPredicted RBP4.4□□□□□ -1.71
TCN1-201ENST00000257264 CSTAP01040 98 aa4.4□□□□□ -1.71
TCN1-201ENST00000257264 FTH1P02794 183 aa4.4□□□□□ -1.71
TCN1-201ENST00000257264 IGF1P05019 195 aa4.4□□□□□ -1.71
TCN1-201ENST00000257264 CCDC166P0CW27 439 aa4.4□□□□□ -1.71
TCN1-201ENST00000257264 NPIPA8P0DM63 369 aa4.4□□□□□ -1.71
TCN1-201ENST00000257264 SMIM10L2AP0DMW4 78 aa4.4□□□□□ -1.71
TCN1-201ENST00000257264 SMIM10L2BP0DMW5 78 aa4.4□□□□□ -1.71
TCN1-201ENST00000257264 ETS2P15036 469 aa4.4□□□□□ -1.71
TCN1-201ENST00000257264 ATP5C1P36542 298 aaKnown RBP4.4□□□□□ -1.71
TCN1-201ENST00000257264 HOXA1P49639 335 aaPredicted RBP4.4□□□□□ -1.71
TCN1-201ENST00000257264 PGFP49763 221 aa4.4□□□□□ -1.71
TCN1-201ENST00000257264 CSRP3P50461 194 aa4.4□□□□□ -1.71
TCN1-201ENST00000257264 CRYBB1P53674 252 aaPredicted RBP4.4□□□□□ -1.71
TCN1-201ENST00000257264 PKNOX1P55347 436 aa4.4□□□□□ -1.71
TCN1-201ENST00000257264 NUP107P57740 925 aa4.4□□□□□ -1.71
TCN1-201ENST00000257264 RPL27P61353 136 aaKnown RBP4.4□□□□□ -1.71
TCN1-201ENST00000257264 NAA20P61599 178 aa4.4□□□□□ -1.71
TCN1-201ENST00000257264 EWSR1Q01844 656 aaKnown RBP eCLIP4.4□□□□□ -1.71
TCN1-201ENST00000257264 BNIP2Q12982 314 aa4.4□□□□□ -1.71
TCN1-201ENST00000257264 POU6F1Q14863 301 aa4.4□□□□□ -1.71
TCN1-201ENST00000257264 ATXN7L3Q14CW9 347 aaPredicted RBP4.4□□□□□ -1.71
TCN1-201ENST00000257264 ZNF74Q16587 644 aa4.4□□□□□ -1.71
TCN1-201ENST00000257264 SPANXN4Q5MJ08 99 aa4.4□□□□□ -1.71
TCN1-201ENST00000257264 FAM182AQ5T1J6 154 aa4.4□□□□□ -1.71
TCN1-201ENST00000257264 C6orf52Q5T4I8 152 aa4.4□□□□□ -1.71
TCN1-201ENST00000257264 SYPL2Q5VXT5 272 aa4.4□□□□□ -1.71
TCN1-201ENST00000257264 REP15Q6BDI9 236 aa4.4□□□□□ -1.71
TCN1-201ENST00000257264 FAM71F2Q6NXP2 309 aa4.4□□□□□ -1.71
TCN1-201ENST00000257264 TMEM207Q6UWW9 146 aa4.4□□□□□ -1.71
TCN1-201ENST00000257264 DHFR2Q86XF0 187 aa4.4□□□□□ -1.71
TCN1-201ENST00000257264 KLHDC8BQ8IXV7 354 aa4.4□□□□□ -1.71
TCN1-201ENST00000257264 NAGSQ8N159 534 aa4.4□□□□□ -1.71
TCN1-201ENST00000257264 FBXL14Q8N1E6 418 aa4.4□□□□□ -1.71
TCN1-201ENST00000257264 GTPBP8Q8N3Z3 284 aaPredicted RBP4.4□□□□□ -1.71
TCN1-201ENST00000257264 ZNF441Q8N8Z8 693 aa4.4□□□□□ -1.71
TCN1-201ENST00000257264 KBTBD8Q8NFY9 601 aa4.4□□□□□ -1.71
TCN1-201ENST00000257264 OR1F12Q8NHA8 337 aa4.4□□□□□ -1.71
TCN1-201ENST00000257264 APOBEC4Q8WW27 367 aaKnown RBP4.4□□□□□ -1.71
TCN1-201ENST00000257264 NDRG1Q92597 394 aaKnown RBP4.4□□□□□ -1.71
TCN1-201ENST00000257264 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.4□□□□□ -1.71
TCN1-201ENST00000257264 SCRN2Q96FV2 425 aa4.4□□□□□ -1.71
TCN1-201ENST00000257264 DUS3LQ96G46 650 aaKnown RBP4.4□□□□□ -1.71
TCN1-201ENST00000257264 RMND5BQ96G75 393 aaPredicted RBP4.4□□□□□ -1.71
TCN1-201ENST00000257264 ZNF597Q96LX8 424 aa4.4□□□□□ -1.71
TCN1-201ENST00000257264 RANBP9Q96S59 729 aa4.4□□□□□ -1.71
TCN1-201ENST00000257264 APOL2Q9BQE5 337 aa4.4□□□□□ -1.71
TCN1-201ENST00000257264 PSD2Q9BQI7 771 aa4.4□□□□□ -1.71
TCN1-201ENST00000257264 APOOQ9BUR5 198 aa4.4□□□□□ -1.71
TCN1-201ENST00000257264 KRTAP9-8Q9BYQ0 159 aa4.4□□□□□ -1.71
TCN1-201ENST00000257264 SLC25A51Q9H1U9 297 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms