RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 GTPBP2Q9BX10 602 aaKnown RBP16.99■□□□□ 0.31
PDLIM4-201ENST00000253754 NLKQ9UBE8 527 aa16.99■□□□□ 0.31
PDLIM4-201ENST00000253754 NUFIP1Q9UHK0 495 aaKnown RBP16.99■□□□□ 0.31
PDLIM4-201ENST00000253754 IGHV3-20A0A0C4DH32 117 aa16.99■□□□□ 0.31
PDLIM4-201ENST00000253754 GLCEO94923 617 aa16.99■□□□□ 0.31
PDLIM4-201ENST00000253754 KRT8P05787 483 aa16.99■□□□□ 0.31
PDLIM4-201ENST00000253754 CD14P08571 375 aa16.99■□□□□ 0.31
PDLIM4-201ENST00000253754 RAB3BP20337 219 aa16.99■□□□□ 0.31
PDLIM4-201ENST00000253754 ITPKBP27987 946 aa16.99■□□□□ 0.31
PDLIM4-201ENST00000253754 PLCXD2Q0VAA5 305 aa16.99■□□□□ 0.31
PDLIM4-201ENST00000253754 ANGPT1Q15389 498 aa16.99■□□□□ 0.31
PDLIM4-201ENST00000253754 ZNF57Q68EA5 555 aaPredicted RBP16.99■□□□□ 0.31
PDLIM4-201ENST00000253754 TMPRSS9Q7Z410 1059 aa16.99■□□□□ 0.31
PDLIM4-201ENST00000253754 TPRA1Q86W33 373 aa16.99■□□□□ 0.31
PDLIM4-201ENST00000253754 LRRC28Q86X40 367 aaPredicted RBP16.99■□□□□ 0.31
PDLIM4-201ENST00000253754 CARFQ8N187 725 aa16.99■□□□□ 0.31
PDLIM4-201ENST00000253754 UBASH3BQ8TF42 649 aa16.99■□□□□ 0.31
PDLIM4-201ENST00000253754 C17orf50Q8WW18 174 aa16.99■□□□□ 0.31
PDLIM4-201ENST00000253754 SLC41A2Q96JW4 573 aa16.99■□□□□ 0.31
PDLIM4-201ENST00000253754 KCNJ15Q99712 375 aa16.99■□□□□ 0.31
PDLIM4-201ENST00000253754 TTYH2Q9BSA4 534 aa16.99■□□□□ 0.31
PDLIM4-201ENST00000253754 BEX2Q9BXY8 128 aa16.99■□□□□ 0.31
PDLIM4-201ENST00000253754 WWTR1Q9GZV5 400 aa16.99■□□□□ 0.31
PDLIM4-201ENST00000253754 RBFOX1Q9NWB1 397 aaKnown RBP16.99■□□□□ 0.31
PDLIM4-201ENST00000253754 KLHDC2Q9Y2U9 406 aa16.99■□□□□ 0.31
PDLIM4-201ENST00000253754 SNRPBP14678 240 aaKnown RBP16.98■□□□□ 0.31
PDLIM4-201ENST00000253754 ATF1P18846 271 aa16.98■□□□□ 0.31
PDLIM4-201ENST00000253754 UQCRC1P31930 480 aa16.98■□□□□ 0.31
PDLIM4-201ENST00000253754 NANOS3P60323 173 aaKnown RBP16.98■□□□□ 0.31
PDLIM4-201ENST00000253754 QPRTQ15274 297 aa16.98■□□□□ 0.31
PDLIM4-201ENST00000253754 CCDC92Q53HC0 331 aaPredicted RBP16.98■□□□□ 0.31
PDLIM4-201ENST00000253754 SLC35D3Q5M8T2 416 aa16.98■□□□□ 0.31
PDLIM4-201ENST00000253754 HSD17B8Q92506 261 aa16.98■□□□□ 0.31
PDLIM4-201ENST00000253754 TSPAN32Q96QS1 320 aa16.98■□□□□ 0.31
PDLIM4-201ENST00000253754 UBL7Q96S82 380 aaPredicted RBP16.98■□□□□ 0.31
PDLIM4-201ENST00000253754 HDHD2Q9H0R4 259 aa16.98■□□□□ 0.31
PDLIM4-201ENST00000253754 SRA1Q9HD15 236 aaKnown RBP16.98■□□□□ 0.31
PDLIM4-201ENST00000253754 FGF21Q9NSA1 209 aa16.98■□□□□ 0.31
PDLIM4-201ENST00000253754 YKT6O15498 198 aa16.98■□□□□ 0.31
PDLIM4-201ENST00000253754 NUDT14O95848 222 aa16.98■□□□□ 0.31
PDLIM4-201ENST00000253754 FAM157BP0CG42 384 aa16.98■□□□□ 0.31
PDLIM4-201ENST00000253754 PTBP1P26599 531 aaKnown RBP eCLIP16.98■□□□□ 0.31
PDLIM4-201ENST00000253754 SDHAP31040 664 aa16.98■□□□□ 0.31
PDLIM4-201ENST00000253754 INPP1P49441 399 aa16.98■□□□□ 0.31
PDLIM4-201ENST00000253754 ISXQ2M1V0 245 aa16.98■□□□□ 0.31
PDLIM4-201ENST00000253754 MESTQ5EB52 335 aa16.98■□□□□ 0.31
PDLIM4-201ENST00000253754 HLA-DQA1Q5Y7H0 255 aa16.98■□□□□ 0.31
PDLIM4-201ENST00000253754 SLC23A3Q6PIS1 610 aa16.98■□□□□ 0.31
PDLIM4-201ENST00000253754 C16orf47Q6ZP98 133 aaPredicted RBP16.98■□□□□ 0.31
PDLIM4-201ENST00000253754 PRR23CQ6ZRP0 262 aa16.98■□□□□ 0.31
PDLIM4-201ENST00000253754 ASB18Q6ZVZ8 466 aa16.98■□□□□ 0.31
PDLIM4-201ENST00000253754 RABEPKQ7Z6M1 372 aa16.98■□□□□ 0.31
PDLIM4-201ENST00000253754 UPRTQ96BW1 309 aa16.98■□□□□ 0.31
PDLIM4-201ENST00000253754 KCTD12Q96CX2 325 aaKnown RBP16.98■□□□□ 0.31
PDLIM4-201ENST00000253754 ZNF501Q96CX3 271 aaPredicted RBP16.98■□□□□ 0.31
PDLIM4-201ENST00000253754 LAT2Q9GZY6 243 aa16.98■□□□□ 0.31
PDLIM4-201ENST00000253754 MRTO4Q9UKD2 239 aaKnown RBP16.98■□□□□ 0.31
PDLIM4-201ENST00000253754 AK6Q9Y3D8 172 aaKnown RBP16.98■□□□□ 0.31
PDLIM4-201ENST00000253754 N6AMT1Q9Y5N5 214 aa16.98■□□□□ 0.31
PDLIM4-201ENST00000253754 A0A1B0GX78 115 aa16.97■□□□□ 0.31
PDLIM4-201ENST00000253754 TVP23AA6NH52 213 aa16.97■□□□□ 0.31
PDLIM4-201ENST00000253754 IDH3BO43837 385 aa16.97■□□□□ 0.31
PDLIM4-201ENST00000253754 CER1O95813 267 aa16.97■□□□□ 0.31
PDLIM4-201ENST00000253754 GPANK1O95872 356 aa16.97■□□□□ 0.31
PDLIM4-201ENST00000253754 PRKAR1AP10644 381 aa16.97■□□□□ 0.31
PDLIM4-201ENST00000253754 PNLIPP16233 465 aa16.97■□□□□ 0.31
PDLIM4-201ENST00000253754 NPR2P20594 1047 aa16.97■□□□□ 0.31
PDLIM4-201ENST00000253754 TALDO1P37837 337 aa16.97■□□□□ 0.31
PDLIM4-201ENST00000253754 RPS27P42677 84 aaKnown RBP16.97■□□□□ 0.31
PDLIM4-201ENST00000253754 CEP78Q5JTW2 689 aa16.97■□□□□ 0.31
PDLIM4-201ENST00000253754 OTPQ5XKR4 325 aa16.97■□□□□ 0.31
PDLIM4-201ENST00000253754 RPL22L1Q6P5R6 122 aaKnown RBP16.97■□□□□ 0.31
PDLIM4-201ENST00000253754 PLET1Q6UQ28 207 aa16.97■□□□□ 0.31
PDLIM4-201ENST00000253754 ZNF574Q6ZN55 896 aaPredicted RBP16.97■□□□□ 0.31
PDLIM4-201ENST00000253754 NANOGNBQ7Z5D8 188 aa16.97■□□□□ 0.31
PDLIM4-201ENST00000253754 EXD3Q8N9H8 876 aa16.97■□□□□ 0.31
PDLIM4-201ENST00000253754 CAPSLQ8WWF8 208 aa16.97■□□□□ 0.31
PDLIM4-201ENST00000253754 LIPHQ8WWY8 451 aa16.97■□□□□ 0.31
PDLIM4-201ENST00000253754 RNF166Q96A37 237 aaPredicted RBP16.97■□□□□ 0.31
PDLIM4-201ENST00000253754 OMA1Q96E52 524 aa16.97■□□□□ 0.31
PDLIM4-201ENST00000253754 ZNF486Q96H40 463 aaPredicted RBP16.97■□□□□ 0.31
PDLIM4-201ENST00000253754 ABHD1Q96SE0 405 aa16.97■□□□□ 0.31
PDLIM4-201ENST00000253754 ADAM19Q9H013 955 aa16.97■□□□□ 0.31
PDLIM4-201ENST00000253754 SYNDIG1Q9H7V2 258 aa16.97■□□□□ 0.31
PDLIM4-201ENST00000253754 RXFP3Q9NSD7 469 aa16.97■□□□□ 0.31
PDLIM4-201ENST00000253754 DDX28Q9NUL7 540 aaKnown RBP16.97■□□□□ 0.31
PDLIM4-201ENST00000253754 DMXL1Q9Y485 3027 aa16.97■□□□□ 0.31
PDLIM4-201ENST00000253754 TMEM72A0PK05 275 aa16.96■□□□□ 0.31
PDLIM4-201ENST00000253754 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.96■□□□□ 0.31
PDLIM4-201ENST00000253754 NDUFB5O43674 189 aa16.96■□□□□ 0.31
PDLIM4-201ENST00000253754 SCO2O43819 266 aa16.96■□□□□ 0.31
PDLIM4-201ENST00000253754 TSPAN2O60636 221 aa16.96■□□□□ 0.31
PDLIM4-201ENST00000253754 RPP14O95059 124 aaKnown RBP16.96■□□□□ 0.31
PDLIM4-201ENST00000253754 ABCD3P28288 659 aa16.96■□□□□ 0.31
PDLIM4-201ENST00000253754 RCVRNP35243 200 aa16.96■□□□□ 0.31
PDLIM4-201ENST00000253754 CAPZA2P47755 286 aa16.96■□□□□ 0.31
PDLIM4-201ENST00000253754 ZNF528Q3MIS6 628 aa16.96■□□□□ 0.31
PDLIM4-201ENST00000253754 TMEM71Q6P5X7 295 aa16.96■□□□□ 0.31
PDLIM4-201ENST00000253754 ESPNLQ6ZVH7 1005 aa16.96■□□□□ 0.31
PDLIM4-201ENST00000253754 PRSS42Q7Z5A4 293 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms