RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 TAAR8Q969N4 342 aa17.76■□□□□ 0.43
CDC42EP1-201ENST00000249014 DNAJA3Q96EY1 480 aa17.76■□□□□ 0.43
CDC42EP1-201ENST00000249014 MRPL48Q96GC5 212 aaKnown RBP17.76■□□□□ 0.43
CDC42EP1-201ENST00000249014 SRA1Q9HD15 236 aaKnown RBP17.76■□□□□ 0.43
CDC42EP1-201ENST00000249014 ZNF281Q9Y2X9 895 aa17.76■□□□□ 0.43
CDC42EP1-201ENST00000249014 PCDHGA9Q9Y5G4 932 aaKnown RBP17.76■□□□□ 0.43
CDC42EP1-201ENST00000249014 NUP210LQ5VU65 1888 aa17.76■□□□□ 0.43
CDC42EP1-201ENST00000249014 A0A0A6YYJ9 748 aa17.76■□□□□ 0.43
CDC42EP1-201ENST00000249014 ZNF879B4DU55 563 aa17.76■□□□□ 0.43
CDC42EP1-201ENST00000249014 WISP1O95388 367 aa17.76■□□□□ 0.43
CDC42EP1-201ENST00000249014 OR8G3PP0DMU2 310 aa17.76■□□□□ 0.43
CDC42EP1-201ENST00000249014 CFHR1Q03591 330 aa17.76■□□□□ 0.43
CDC42EP1-201ENST00000249014 ZP2Q05996 745 aa17.76■□□□□ 0.43
CDC42EP1-201ENST00000249014 TOMM34Q15785 309 aaPredicted RBP17.76■□□□□ 0.43
CDC42EP1-201ENST00000249014 MESTQ5EB52 335 aa17.76■□□□□ 0.43
CDC42EP1-201ENST00000249014 BCL2L15Q5TBC7 163 aa17.76■□□□□ 0.43
CDC42EP1-201ENST00000249014 SLC16A9Q7RTY1 509 aa17.76■□□□□ 0.43
CDC42EP1-201ENST00000249014 LIX1LQ8IVB5 337 aa17.76■□□□□ 0.43
CDC42EP1-201ENST00000249014 SLC35F3Q8IY50 421 aa17.76■□□□□ 0.43
CDC42EP1-201ENST00000249014 OIT3Q8WWZ8 545 aa17.76■□□□□ 0.43
CDC42EP1-201ENST00000249014 AKAP1Q92667 903 aaKnown RBP eCLIP17.76■□□□□ 0.437e-7■□□□□ 10.2
CDC42EP1-201ENST00000249014 TSPAN32Q96QS1 320 aa17.76■□□□□ 0.43
CDC42EP1-201ENST00000249014 OR1F2PQ96R84 312 aa17.76■□□□□ 0.43
CDC42EP1-201ENST00000249014 TSPAN10Q9H1Z9 355 aaPredicted RBP17.76■□□□□ 0.43
CDC42EP1-201ENST00000249014 CEP192Q8TEP8 1941 aa17.76■□□□□ 0.43
CDC42EP1-201ENST00000249014 FER1L5A0AVI2 2057 aa17.75■□□□□ 0.43
CDC42EP1-201ENST00000249014 TRAV6A0A075B6T7 132 aa17.75■□□□□ 0.43
CDC42EP1-201ENST00000249014 SMLR1H3BR10 107 aa17.75■□□□□ 0.43
CDC42EP1-201ENST00000249014 RPP14O95059 124 aaKnown RBP17.75■□□□□ 0.43
CDC42EP1-201ENST00000249014 TXNDC12O95881 172 aa17.75■□□□□ 0.43
CDC42EP1-201ENST00000249014 S100A1P23297 94 aa17.75■□□□□ 0.43
CDC42EP1-201ENST00000249014 GZMKP49863 264 aa17.75■□□□□ 0.43
CDC42EP1-201ENST00000249014 HNRNPKP61978 463 aaKnown RBP eCLIP17.75■□□□□ 0.433e-10■■■■□ 22.6
CDC42EP1-201ENST00000249014 TDGQ13569 410 aa17.75■□□□□ 0.43
CDC42EP1-201ENST00000249014 VWA2Q5GFL6 755 aa17.75■□□□□ 0.43
CDC42EP1-201ENST00000249014 HACD4Q5VWC8 232 aa17.75■□□□□ 0.43
CDC42EP1-201ENST00000249014 MTFR2Q6P444 385 aa17.75■□□□□ 0.43
CDC42EP1-201ENST00000249014 PRSS45Q7RTY3 260 aa17.75■□□□□ 0.43
CDC42EP1-201ENST00000249014 SIAH3Q8IW03 269 aa17.75■□□□□ 0.43
CDC42EP1-201ENST00000249014 C9orf40Q8IXQ3 194 aa17.75■□□□□ 0.43
CDC42EP1-201ENST00000249014 TIGD4Q8IY51 512 aa17.75■□□□□ 0.43
CDC42EP1-201ENST00000249014 IZUMO1Q8IYV9 350 aa17.75■□□□□ 0.43
CDC42EP1-201ENST00000249014 TOMM5Q8N4H5 51 aa17.75■□□□□ 0.43
CDC42EP1-201ENST00000249014 OR1L3Q8NH93 324 aa17.75■□□□□ 0.43
CDC42EP1-201ENST00000249014 ZNF671Q8TAW3 534 aa17.75■□□□□ 0.43
CDC42EP1-201ENST00000249014 ELF4Q99607 663 aaPredicted RBP17.75■□□□□ 0.43
CDC42EP1-201ENST00000249014 ADAM19Q9H013 955 aa17.75■□□□□ 0.43
CDC42EP1-201ENST00000249014 CHRDQ9H2X0 955 aa17.75■□□□□ 0.43
CDC42EP1-201ENST00000249014 NUDT15Q9NV35 164 aa17.75■□□□□ 0.43
CDC42EP1-201ENST00000249014 ING3Q9NXR8 418 aa17.75■□□□□ 0.43
CDC42EP1-201ENST00000249014 GRHPRQ9UBQ7 328 aa17.75■□□□□ 0.43
CDC42EP1-201ENST00000249014 MRM2Q9UI43 246 aaKnown RBP17.75■□□□□ 0.43
CDC42EP1-201ENST00000249014 TEKT2Q9UIF3 430 aa17.75■□□□□ 0.43
CDC42EP1-201ENST00000249014 SLC6A5Q9Y345 797 aa17.75■□□□□ 0.43
CDC42EP1-201ENST00000249014 NXPH1P58417 271 aa17.74■□□□□ 0.43
CDC42EP1-201ENST00000249014 SNAP47Q5SQN1 464 aa17.74■□□□□ 0.43
CDC42EP1-201ENST00000249014 HES5Q5TA89 166 aa17.74■□□□□ 0.43
CDC42EP1-201ENST00000249014 BICRALQ6AI39 1079 aa17.74■□□□□ 0.43
CDC42EP1-201ENST00000249014 OR6V1Q8N148 313 aa17.74■□□□□ 0.43
CDC42EP1-201ENST00000249014 C7orf57Q8NEG2 295 aa17.74■□□□□ 0.43
CDC42EP1-201ENST00000249014 MAP6Q96JE9 813 aa17.74■□□□□ 0.43
CDC42EP1-201ENST00000249014 LAT2Q9GZY6 243 aa17.74■□□□□ 0.43
CDC42EP1-201ENST00000249014 MOKQ9UQ07 419 aa17.74■□□□□ 0.43
CDC42EP1-201ENST00000249014 CAMK2AQ9UQM7 478 aa17.74■□□□□ 0.43
CDC42EP1-201ENST00000249014 ALPK2Q86TB3 2170 aa17.74■□□□□ 0.43
CDC42EP1-201ENST00000249014 TVP23AA6NH52 213 aa17.74■□□□□ 0.43
CDC42EP1-201ENST00000249014 UPK3AO75631 287 aa17.74■□□□□ 0.43
CDC42EP1-201ENST00000249014 C1QBP02746 253 aa17.74■□□□□ 0.43
CDC42EP1-201ENST00000249014 ERP29P30040 261 aaKnown RBP17.74■□□□□ 0.43
CDC42EP1-201ENST00000249014 HSD11B2P80365 405 aa17.74■□□□□ 0.43
CDC42EP1-201ENST00000249014 PITPNAQ00169 270 aa17.74■□□□□ 0.43
CDC42EP1-201ENST00000249014 RPL6Q02878 288 aaKnown RBP17.74■□□□□ 0.43
CDC42EP1-201ENST00000249014 EBPQ15125 230 aaKnown RBP17.74■□□□□ 0.43
CDC42EP1-201ENST00000249014 C1QL3Q5VWW1 255 aa17.74■□□□□ 0.43
CDC42EP1-201ENST00000249014 POMZP3Q6PJE2 187 aa17.74■□□□□ 0.43
CDC42EP1-201ENST00000249014 NANOGNBQ7Z5D8 188 aa17.74■□□□□ 0.43
CDC42EP1-201ENST00000249014 MARCH3Q86UD3 253 aa17.74■□□□□ 0.43
CDC42EP1-201ENST00000249014 TDHQ8IZJ6 230 aa17.74■□□□□ 0.43
CDC42EP1-201ENST00000249014 CMTM4Q8IZR5 234 aa17.74■□□□□ 0.43
CDC42EP1-201ENST00000249014 PHYHIPQ92561 330 aa17.74■□□□□ 0.43
CDC42EP1-201ENST00000249014 UNC13CQ8NB66 2214 aa17.74■□□□□ 0.43
CDC42EP1-201ENST00000249014 TCRBV16S1A1N1A0A5B0 115 aa17.73■□□□□ 0.43
CDC42EP1-201ENST00000249014 HCRTR2O43614 444 aa17.73■□□□□ 0.43
CDC42EP1-201ENST00000249014 SCO2O43819 266 aa17.73■□□□□ 0.43
CDC42EP1-201ENST00000249014 CSNK1EP49674 416 aaKnown RBP17.73■□□□□ 0.43
CDC42EP1-201ENST00000249014 NR0B1P51843 470 aaKnown RBP17.73■□□□□ 0.43
CDC42EP1-201ENST00000249014 EPHA4P54764 986 aa17.73■□□□□ 0.43
CDC42EP1-201ENST00000249014 ELAVL1Q15717 326 aaKnown RBP17.73■□□□□ 0.43
CDC42EP1-201ENST00000249014 UBE2NLQ5JXB2 153 aa17.73■□□□□ 0.43
CDC42EP1-201ENST00000249014 LIPNQ5VXI9 398 aa17.73■□□□□ 0.43
CDC42EP1-201ENST00000249014 FAM199XQ6PEV8 388 aaPredicted RBP17.73■□□□□ 0.43
CDC42EP1-201ENST00000249014 PRSS58Q8IYP2 241 aa17.73■□□□□ 0.43
CDC42EP1-201ENST00000249014 LILRB4Q8NHJ6 448 aa17.73■□□□□ 0.43
CDC42EP1-201ENST00000249014 ZFAND1Q8TCF1 268 aa17.73■□□□□ 0.43
CDC42EP1-201ENST00000249014 ADAD1Q96M93 576 aaKnown RBP17.73■□□□□ 0.43
CDC42EP1-201ENST00000249014 PHF7Q9BWX1 381 aaPredicted RBP17.73■□□□□ 0.43
CDC42EP1-201ENST00000249014 AUNIPQ9H7T9 357 aa17.73■□□□□ 0.43
CDC42EP1-201ENST00000249014 MRTO4Q9UKD2 239 aaKnown RBP17.73■□□□□ 0.43
CDC42EP1-201ENST00000249014 IGHV1OR21-1A0A087WYE8 117 aa17.73■□□□□ 0.43
CDC42EP1-201ENST00000249014 IFITM5A6NNB3 132 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms