RNA–Protein interactions for RNA: ENST00000243056.4

HOXC13-201, Transcript of homeobox C13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC13, Length 2,423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13-201ENST00000243056 CLCC1Q96S66 551 aa18.22■□□□□ 0.51
HOXC13-201ENST00000243056 SPOCK3Q9BQ16 436 aa18.22■□□□□ 0.51
HOXC13-201ENST00000243056 SEC11CQ9BY50 192 aa18.22■□□□□ 0.51
HOXC13-201ENST00000243056 RDH14Q9HBH5 336 aa18.22■□□□□ 0.51
HOXC13-201ENST00000243056 PHPT1Q9NRX4 125 aaPredicted RBP18.22■□□□□ 0.51
HOXC13-201ENST00000243056 MRPS17Q9Y2R5 130 aaKnown RBP18.22■□□□□ 0.51
HOXC13-201ENST00000243056 KHDRBS3O75525 346 aaKnown RBP18.21■□□□□ 0.51
HOXC13-201ENST00000243056 ANXA2P07355 339 aaKnown RBP18.21■□□□□ 0.51
HOXC13-201ENST00000243056 CDH11P55287 796 aa18.21■□□□□ 0.51
HOXC13-201ENST00000243056 AGERQ15109 404 aa18.21■□□□□ 0.51
HOXC13-201ENST00000243056 LRRTM4Q86VH4 590 aa18.21■□□□□ 0.51
HOXC13-201ENST00000243056 GJD3Q8N144 294 aa18.21■□□□□ 0.51
HOXC13-201ENST00000243056 OR4K1Q8NGD4 311 aa18.21■□□□□ 0.51
HOXC13-201ENST00000243056 OR4D11Q8NGI4 311 aa18.21■□□□□ 0.51
HOXC13-201ENST00000243056 OR4A4PQ8NGN8 299 aa18.21■□□□□ 0.51
HOXC13-201ENST00000243056 IL17FQ96PD4 163 aa18.21■□□□□ 0.51
HOXC13-201ENST00000243056 SLC12A9Q9BXP2 914 aa18.21■□□□□ 0.51
HOXC13-201ENST00000243056 TRBV23OR9-2A0A075B6M9 112 aa18.21■□□□□ 0.51
HOXC13-201ENST00000243056 NAP1L6A6NFF2 107 aa18.21■□□□□ 0.51
HOXC13-201ENST00000243056 PYCARD-AS1I3L0S3 204 aa18.21■□□□□ 0.51
HOXC13-201ENST00000243056 IMPA2O14732 288 aa18.21■□□□□ 0.51
HOXC13-201ENST00000243056 TCAPO15273 167 aa18.21■□□□□ 0.51
HOXC13-201ENST00000243056 AK4P27144 223 aaPredicted RBP18.21■□□□□ 0.51
HOXC13-201ENST00000243056 POU4F2Q12837 409 aa18.21■□□□□ 0.51
HOXC13-201ENST00000243056 SYT9Q86SS6 491 aa18.21■□□□□ 0.51
HOXC13-201ENST00000243056 C15orf54Q8N8G6 183 aa18.21■□□□□ 0.51
HOXC13-201ENST00000243056 OR5AR1Q8NGP9 310 aa18.21■□□□□ 0.51
HOXC13-201ENST00000243056 OR2L2Q8NH16 312 aa18.21■□□□□ 0.51
HOXC13-201ENST00000243056 PRDM13Q9H4Q3 707 aa18.21■□□□□ 0.51
HOXC13-201ENST00000243056 PLEKHA1Q9HB21 404 aa18.21■□□□□ 0.51
HOXC13-201ENST00000243056 WSB2Q9NYS7 404 aaPredicted RBP18.21■□□□□ 0.51
HOXC13-201ENST00000243056 KLK11Q9UBX7 282 aa18.21■□□□□ 0.51
HOXC13-201ENST00000243056 SIT1Q9Y3P8 196 aa18.21■□□□□ 0.51
HOXC13-201ENST00000243056 MGAT4DA6NG13 374 aa18.2■□□□□ 0.5
HOXC13-201ENST00000243056 RFPL4AA6NLU0 287 aa18.2■□□□□ 0.5
HOXC13-201ENST00000243056 RFPL4AL1F8VTS6 287 aa18.2■□□□□ 0.5
HOXC13-201ENST00000243056 CLDN4O14493 209 aa18.2■□□□□ 0.5
HOXC13-201ENST00000243056 SLC16A8O95907 504 aa18.2■□□□□ 0.5
HOXC13-201ENST00000243056 ZNF14P17017 642 aaPredicted RBP18.2■□□□□ 0.5
HOXC13-201ENST00000243056 MECP2P51608 486 aaKnown RBP18.2■□□□□ 0.5
HOXC13-201ENST00000243056 ACY1Q03154 408 aa18.2■□□□□ 0.5
HOXC13-201ENST00000243056 TGIF1Q15583 401 aa18.2■□□□□ 0.5
HOXC13-201ENST00000243056 TMPRSS11BQ86T26 416 aa18.2■□□□□ 0.5
HOXC13-201ENST00000243056 SFTPA2Q8IWL1 248 aa18.2■□□□□ 0.5
HOXC13-201ENST00000243056 OR13H1Q8NG92 308 aa18.2■□□□□ 0.5
HOXC13-201ENST00000243056 OR1E3Q8WZA6 343 aa18.2■□□□□ 0.5
HOXC13-201ENST00000243056 CNTNAP3BQ96NU0 1288 aa18.2■□□□□ 0.5
HOXC13-201ENST00000243056 TREM1Q9NP99 234 aa18.2■□□□□ 0.5
HOXC13-201ENST00000243056 SLC22A14Q9Y267 594 aa18.2■□□□□ 0.5
HOXC13-201ENST00000243056 TDRD6O60522 2096 aaKnown RBP18.2■□□□□ 0.5
HOXC13-201ENST00000243056 ZNF879B4DU55 563 aa18.2■□□□□ 0.5
HOXC13-201ENST00000243056 SH3BGRLO75368 114 aa18.2■□□□□ 0.5
HOXC13-201ENST00000243056 SDHAP31040 664 aa18.2■□□□□ 0.5
HOXC13-201ENST00000243056 GGTA1PQ4G0N0 100 aa18.2■□□□□ 0.5
HOXC13-201ENST00000243056 FRG2Q64ET8 278 aa18.2■□□□□ 0.5
HOXC13-201ENST00000243056 RPL13AP3Q6NVV1 102 aa18.2■□□□□ 0.5
HOXC13-201ENST00000243056 PODNL1Q6PEZ8 512 aa18.2■□□□□ 0.5
HOXC13-201ENST00000243056 RNASE11Q8TAA1 199 aaKnown RBP18.2■□□□□ 0.5
HOXC13-201ENST00000243056 SHDQ96IW2 340 aa18.2■□□□□ 0.5
HOXC13-201ENST00000243056 FRG2BQ96QU4 278 aa18.2■□□□□ 0.5
HOXC13-201ENST00000243056 TOLLIPQ9H0E2 274 aa18.2■□□□□ 0.5
HOXC13-201ENST00000243056 TCEAL2Q9H3H9 227 aaPredicted RBP18.2■□□□□ 0.5
HOXC13-201ENST00000243056 SLC32A1Q9H598 525 aa18.2■□□□□ 0.5
HOXC13-201ENST00000243056 IGHV1OR15-9A0A0B4J2B8 117 aa18.19■□□□□ 0.5
HOXC13-201ENST00000243056 UBE2QL1A1L167 161 aa18.19■□□□□ 0.5
HOXC13-201ENST00000243056 OR52A4PA6NMU1 304 aa18.19■□□□□ 0.5
HOXC13-201ENST00000243056 NDUFB6O95139 128 aa18.19■□□□□ 0.5
HOXC13-201ENST00000243056 FARS2O95363 451 aaKnown RBP18.19■□□□□ 0.5
HOXC13-201ENST00000243056 IGHA1P01876 353 aa18.19■□□□□ 0.5
HOXC13-201ENST00000243056 ARAFP10398 606 aa18.19■□□□□ 0.5
HOXC13-201ENST00000243056 HNRNPA2B1P22626 353 aaKnown RBP18.19■□□□□ 0.5
HOXC13-201ENST00000243056 PAX6P26367 422 aa18.19■□□□□ 0.5
HOXC13-201ENST00000243056 C21orf58P58505 322 aa18.19■□□□□ 0.5
HOXC13-201ENST00000243056 ZNF630Q2M218 657 aaPredicted RBP18.19■□□□□ 0.5
HOXC13-201ENST00000243056 PRAMEF14Q5SWL7 426 aa18.19■□□□□ 0.5
HOXC13-201ENST00000243056 ADNP2Q6IQ32 1131 aa18.19■□□□□ 0.5
HOXC13-201ENST00000243056 CEACAM19Q7Z692 300 aa18.19■□□□□ 0.5
HOXC13-201ENST00000243056 ZNF546Q86UE3 836 aa18.19■□□□□ 0.5
HOXC13-201ENST00000243056 CPNE2Q96FN4 548 aaPredicted RBP18.19■□□□□ 0.5
HOXC13-201ENST00000243056 MED8Q96G25 268 aa18.19■□□□□ 0.5
HOXC13-201ENST00000243056 ZNF471Q9BX82 626 aaPredicted RBP18.19■□□□□ 0.5
HOXC13-201ENST00000243056 TGIF2Q9GZN2 237 aa18.19■□□□□ 0.5
HOXC13-201ENST00000243056 PPP4R1LQ9P1A2 415 aa18.19■□□□□ 0.5
HOXC13-201ENST00000243056 GPR34Q9UPC5 381 aa18.19■□□□□ 0.5
HOXC13-201ENST00000243056 ANGPT4Q9Y264 503 aa18.19■□□□□ 0.5
HOXC13-201ENST00000243056 TECTAO75443 2155 aa18.19■□□□□ 0.5
HOXC13-201ENST00000243056 CACNB4O00305 520 aaPredicted RBP18.19■□□□□ 0.5
HOXC13-201ENST00000243056 FMO6PO60774 539 aa18.19■□□□□ 0.5
HOXC13-201ENST00000243056 EML2O95834 649 aa18.19■□□□□ 0.5
HOXC13-201ENST00000243056 C6orf47O95873 294 aa18.19■□□□□ 0.5
HOXC13-201ENST00000243056 ADH7P40394 386 aa18.19■□□□□ 0.5
HOXC13-201ENST00000243056 F2RL1P55085 397 aa18.19■□□□□ 0.5
HOXC13-201ENST00000243056 RPE65Q16518 533 aa18.19■□□□□ 0.5
HOXC13-201ENST00000243056 BEX5Q5H9J7 111 aa18.19■□□□□ 0.5
HOXC13-201ENST00000243056 ANXA8L1Q5VT79 327 aa18.19■□□□□ 0.5
HOXC13-201ENST00000243056 OLFML2AQ68BL7 652 aa18.19■□□□□ 0.5
HOXC13-201ENST00000243056 Q6ZSR6 202 aa18.19■□□□□ 0.5
HOXC13-201ENST00000243056 SLC36A1Q7Z2H8 476 aa18.19■□□□□ 0.5
HOXC13-201ENST00000243056 TGIF2LXQ8IUE1 241 aa18.19■□□□□ 0.5
HOXC13-201ENST00000243056 SLC22A18ASQ8N1D0 253 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms