RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 H3BSH0 61 aa10.15□□□□□ -0.78
COPA-201ENST00000241704 PLRG1O43660 514 aaKnown RBP10.15□□□□□ -0.78
COPA-201ENST00000241704 HTR3BO95264 441 aa10.15□□□□□ -0.78
COPA-201ENST00000241704 CD160O95971 181 aa10.15□□□□□ -0.78
COPA-201ENST00000241704 SLC6A1P30531 599 aa10.15□□□□□ -0.78
COPA-201ENST00000241704 RAB38P57729 211 aa10.15□□□□□ -0.78
COPA-201ENST00000241704 AGBL4Q5VU57 503 aa10.15□□□□□ -0.78
COPA-201ENST00000241704 TMEM88Q6PEY1 159 aa10.15□□□□□ -0.78
COPA-201ENST00000241704 PAQR6Q6TCH4 344 aa10.15□□□□□ -0.78
COPA-201ENST00000241704 B3GLCTQ6Y288 498 aa10.15□□□□□ -0.78
COPA-201ENST00000241704 FAM83HQ6ZRV2 1179 aaPredicted RBP10.15□□□□□ -0.78
COPA-201ENST00000241704 LINC00696Q6ZRV3 163 aa10.15□□□□□ -0.78
COPA-201ENST00000241704 CCDC71Q8IV32 467 aaPredicted RBP10.15□□□□□ -0.78
COPA-201ENST00000241704 GTPBP8Q8N3Z3 284 aaPredicted RBP10.15□□□□□ -0.78
COPA-201ENST00000241704 DDIT4LQ96D03 193 aa10.15□□□□□ -0.78
COPA-201ENST00000241704 NEURL3Q96EH8 262 aa10.15□□□□□ -0.78
COPA-201ENST00000241704 MRGPRX3Q96LB0 322 aa10.15□□□□□ -0.78
COPA-201ENST00000241704 CXorf58Q96LI9 332 aa10.15□□□□□ -0.78
COPA-201ENST00000241704 UTP23Q9BRU9 249 aaKnown RBP10.15□□□□□ -0.78
COPA-201ENST00000241704 SLC7A7Q9UM01 511 aa10.15□□□□□ -0.78
COPA-201ENST00000241704 BOKQ9UMX3 212 aaPredicted RBP10.15□□□□□ -0.78
COPA-201ENST00000241704 A0A1W2PRQ8 180 aa10.15□□□□□ -0.79
COPA-201ENST00000241704 NARSO43776 548 aaKnown RBP10.15□□□□□ -0.79
COPA-201ENST00000241704 MRPL3P09001 348 aaKnown RBP10.15□□□□□ -0.79
COPA-201ENST00000241704 OR3A2P47893 321 aa10.15□□□□□ -0.79
COPA-201ENST00000241704 VEGFCP49767 419 aa10.15□□□□□ -0.79
COPA-201ENST00000241704 CSRP3P50461 194 aa10.15□□□□□ -0.79
COPA-201ENST00000241704 MAT1AQ00266 395 aaKnown RBP10.15□□□□□ -0.79
COPA-201ENST00000241704 ECH1Q13011 328 aa10.15□□□□□ -0.79
COPA-201ENST00000241704 EXOSC7Q15024 291 aaKnown RBP10.15□□□□□ -0.79
COPA-201ENST00000241704 RNF212Q495C1 297 aa10.15□□□□□ -0.79
COPA-201ENST00000241704 BEST3Q8N1M1 668 aa10.15□□□□□ -0.79
COPA-201ENST00000241704 CCDC74AQ96AQ1 378 aa10.15□□□□□ -0.79
COPA-201ENST00000241704 RPP25Q9BUL9 199 aaKnown RBP10.15□□□□□ -0.79
COPA-201ENST00000241704 PIGMQ9H3S5 423 aa10.15□□□□□ -0.79
COPA-201ENST00000241704 RIF1Q5UIP0 2472 aaKnown RBP10.14□□□□□ -0.79
COPA-201ENST00000241704 IGLV3-16A0A075B6K0 115 aa10.14□□□□□ -0.79
COPA-201ENST00000241704 TSPAN11A1L157 253 aa10.14□□□□□ -0.79
COPA-201ENST00000241704 ATG12O94817 140 aa10.14□□□□□ -0.79
COPA-201ENST00000241704 UBL3O95164 117 aa10.14□□□□□ -0.79
COPA-201ENST00000241704 CBR1P16152 277 aa10.14□□□□□ -0.79
COPA-201ENST00000241704 POU4F2Q12837 409 aa10.14□□□□□ -0.79
COPA-201ENST00000241704 ATXN7L3Q14CW9 347 aaPredicted RBP10.14□□□□□ -0.79
COPA-201ENST00000241704 NKAPLQ5M9Q1 402 aa10.14□□□□□ -0.79
COPA-201ENST00000241704 PRAMEF17Q5VTA0 474 aa10.14□□□□□ -0.79
COPA-201ENST00000241704 PRAMEF8Q5VWM4 474 aa10.14□□□□□ -0.79
COPA-201ENST00000241704 PRAMEF7Q5VXH5 474 aa10.14□□□□□ -0.79
COPA-201ENST00000241704 WDR53Q7Z5U6 358 aaPredicted RBP10.14□□□□□ -0.79
COPA-201ENST00000241704 OR11H7Q8NGC8 314 aa10.14□□□□□ -0.79
COPA-201ENST00000241704 ACOT11Q8WXI4 607 aaPredicted RBP10.14□□□□□ -0.79
COPA-201ENST00000241704 OR5B2Q96R09 309 aa10.14□□□□□ -0.79
COPA-201ENST00000241704 ATF6BQ99941 703 aa10.14□□□□□ -0.79
COPA-201ENST00000241704 TRPV4Q9HBA0 871 aa10.14□□□□□ -0.79
COPA-201ENST00000241704 PRDM9Q9NQV7 894 aa10.14□□□□□ -0.79
COPA-201ENST00000241704 SLC23A2Q9UGH3 650 aa10.14□□□□□ -0.79
COPA-201ENST00000241704 PPT2Q9UMR5 302 aa10.14□□□□□ -0.79
COPA-201ENST00000241704 EP300Q09472 2414 aaPredicted RBP10.14□□□□□ -0.79
COPA-201ENST00000241704 DPM1O60762 260 aa10.14□□□□□ -0.79
COPA-201ENST00000241704 MTNR1BP49286 362 aa10.14□□□□□ -0.79
COPA-201ENST00000241704 ADAM8P78325 824 aa10.14□□□□□ -0.79
COPA-201ENST00000241704 GAS6Q14393 721 aa10.14□□□□□ -0.79
COPA-201ENST00000241704 TMEM215Q68D42 235 aa10.14□□□□□ -0.79
COPA-201ENST00000241704 C18orf63Q68DL7 685 aa10.14□□□□□ -0.79
COPA-201ENST00000241704 PAPD4Q6PIY7 484 aaKnown RBP10.14□□□□□ -0.79
COPA-201ENST00000241704 IFI44Q8TCB0 444 aa10.14□□□□□ -0.79
COPA-201ENST00000241704 SMAP2Q8WU79 429 aaPredicted RBP10.14□□□□□ -0.79
COPA-201ENST00000241704 THRSPQ92748 146 aa10.14□□□□□ -0.79
COPA-201ENST00000241704 LURAP1Q96LR2 239 aa10.14□□□□□ -0.79
COPA-201ENST00000241704 AMDHD1Q96NU7 426 aa10.14□□□□□ -0.79
COPA-201ENST00000241704 SEMA6CQ9H3T2 930 aa10.14□□□□□ -0.79
COPA-201ENST00000241704 GLIPR2Q9H4G4 154 aa10.14□□□□□ -0.79
COPA-201ENST00000241704 EVA1AQ9H8M9 152 aa10.14□□□□□ -0.79
COPA-201ENST00000241704 CNIH4Q9P003 139 aa10.14□□□□□ -0.79
COPA-201ENST00000241704 ATXN7L1Q9ULK2 861 aaPredicted RBP10.14□□□□□ -0.79
COPA-201ENST00000241704 PCDHGA9Q9Y5G4 932 aaKnown RBP10.14□□□□□ -0.79
COPA-201ENST00000241704 FAM186AA6NE01 2351 aa10.14□□□□□ -0.79
COPA-201ENST00000241704 AGAP14A8MT82 685 aa10.14□□□□□ -0.79
COPA-201ENST00000241704 M0R036 132 aa10.14□□□□□ -0.79
COPA-201ENST00000241704 POU2F2P09086 479 aa10.14□□□□□ -0.79
COPA-201ENST00000241704 H2BFMP0C1H6 154 aa10.14□□□□□ -0.79
COPA-201ENST00000241704 SMIM6P0DI80 62 aa10.14□□□□□ -0.79
COPA-201ENST00000241704 MAPK3P27361 379 aaPredicted RBP10.14□□□□□ -0.79
COPA-201ENST00000241704 CCL11P51671 97 aa10.14□□□□□ -0.79
COPA-201ENST00000241704 TLE3Q04726 772 aa10.14□□□□□ -0.79
COPA-201ENST00000241704 PDZK1IP1Q13113 114 aa10.14□□□□□ -0.79
COPA-201ENST00000241704 OCLNQ16625 522 aa10.14□□□□□ -0.79
COPA-201ENST00000241704 TMEM201Q5SNT2 666 aa10.14□□□□□ -0.79
COPA-201ENST00000241704 SLC48A1Q6P1K1 146 aa10.14□□□□□ -0.79
COPA-201ENST00000241704 TMEM239Q8WW34 195 aa10.14□□□□□ -0.79
COPA-201ENST00000241704 TEX101Q9BY14 249 aa10.14□□□□□ -0.79
COPA-201ENST00000241704 GPR52Q9Y2T5 361 aa10.14□□□□□ -0.79
COPA-201ENST00000241704 TMEM14AQ9Y6G1 99 aa10.14□□□□□ -0.79
COPA-201ENST00000241704 A0A0B4J293 547 aa10.14□□□□□ -0.79
COPA-201ENST00000241704 LRIT2A6NDA9 550 aa10.14□□□□□ -0.79
COPA-201ENST00000241704 TRIM77I1YAP6 450 aa10.14□□□□□ -0.79
COPA-201ENST00000241704 SULT2B1O00204 365 aa10.14□□□□□ -0.79
COPA-201ENST00000241704 TO15178 435 aa10.14□□□□□ -0.79
COPA-201ENST00000241704 S1PR1P21453 382 aa10.14□□□□□ -0.79
COPA-201ENST00000241704 ETV5P41161 510 aa10.14□□□□□ -0.79
COPA-201ENST00000241704 CDH26Q8IXH8 852 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms