RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 TMEFF2Q9UIK5 374 aaPredicted RBP24.28■■□□□ 1.48
CHMP4B-201ENST00000217402 POFUT2Q9Y2G5 429 aa24.28■■□□□ 1.48
CHMP4B-201ENST00000217402 CDH10Q9Y6N8 788 aa24.28■■□□□ 1.48
CHMP4B-201ENST00000217402 CASQ2O14958 399 aaPredicted RBP24.27■■□□□ 1.48
CHMP4B-201ENST00000217402 NDUFB2O95178 105 aa24.27■■□□□ 1.48
CHMP4B-201ENST00000217402 VAMP5O95183 116 aa24.27■■□□□ 1.48
CHMP4B-201ENST00000217402 ALPLP05186 524 aa24.27■■□□□ 1.48
CHMP4B-201ENST00000217402 GLI4P10075 376 aa24.27■■□□□ 1.48
CHMP4B-201ENST00000217402 RPL4P36578 427 aaKnown RBP24.27■■□□□ 1.48
CHMP4B-201ENST00000217402 PRPS1P60891 318 aa24.27■■□□□ 1.48
CHMP4B-201ENST00000217402 COX10Q12887 443 aa24.27■■□□□ 1.48
CHMP4B-201ENST00000217402 C1DQ13901 141 aaKnown RBP24.27■■□□□ 1.48
CHMP4B-201ENST00000217402 TAF11Q15544 211 aa24.27■■□□□ 1.48
CHMP4B-201ENST00000217402 ANKDD1AQ495B1 522 aa24.27■■□□□ 1.48
CHMP4B-201ENST00000217402 THSD4Q6ZMP0 1018 aa24.27■■□□□ 1.48
CHMP4B-201ENST00000217402 UEVLDQ8IX04 471 aa24.27■■□□□ 1.48
CHMP4B-201ENST00000217402 MARVELD2Q8N4S9 558 aa24.27■■□□□ 1.48
CHMP4B-201ENST00000217402 SAMD8Q96LT4 415 aa24.27■■□□□ 1.48
CHMP4B-201ENST00000217402 OXGR1Q96P68 337 aa24.27■■□□□ 1.48
CHMP4B-201ENST00000217402 PLA2G12AQ9BZM1 189 aa24.27■■□□□ 1.48
CHMP4B-201ENST00000217402 REV1Q9UBZ9 1251 aa24.27■■□□□ 1.48
CHMP4B-201ENST00000217402 ING1Q9UK53 422 aaPredicted RBP24.27■■□□□ 1.48
CHMP4B-201ENST00000217402 ZNF462Q96JM2 2506 aa24.27■■□□□ 1.48
CHMP4B-201ENST00000217402 MCIDASD6RGH6 385 aa24.26■■□□□ 1.47
CHMP4B-201ENST00000217402 H3BN98 237 aa24.26■■□□□ 1.47
CHMP4B-201ENST00000217402 TOXO94900 526 aa24.26■■□□□ 1.47
CHMP4B-201ENST00000217402 ZNF43P17038 809 aa24.26■■□□□ 1.47
CHMP4B-201ENST00000217402 ALDH3A2P51648 485 aa24.26■■□□□ 1.47
CHMP4B-201ENST00000217402 PER3P56645 1201 aa24.26■■□□□ 1.47
CHMP4B-201ENST00000217402 PMPCAQ10713 525 aa24.26■■□□□ 1.47
CHMP4B-201ENST00000217402 ZP4Q12836 540 aa24.26■■□□□ 1.47
CHMP4B-201ENST00000217402 SLC36A3Q495N2 470 aa24.26■■□□□ 1.47
CHMP4B-201ENST00000217402 OGFRL1Q5TC84 451 aaPredicted RBP24.26■■□□□ 1.47
CHMP4B-201ENST00000217402 GTF2IRD2BQ6EKJ0 949 aa24.26■■□□□ 1.47
CHMP4B-201ENST00000217402 GTF2IRD2Q86UP8 949 aa24.26■■□□□ 1.47
CHMP4B-201ENST00000217402 DNAJC9Q8WXX5 260 aa24.26■■□□□ 1.47
CHMP4B-201ENST00000217402 INTS12Q96CB8 462 aaKnown RBP24.26■■□□□ 1.47
CHMP4B-201ENST00000217402 SF3B5Q9BWJ5 86 aaKnown RBP24.26■■□□□ 1.47
CHMP4B-201ENST00000217402 INIPQ9NRY2 104 aa24.26■■□□□ 1.47
CHMP4B-201ENST00000217402 MEMO1Q9Y316 297 aa24.26■■□□□ 1.47
CHMP4B-201ENST00000217402 POLEQ07864 2286 aa24.26■■□□□ 1.47
CHMP4B-201ENST00000217402 E9PLN8 166 aa24.25■■□□□ 1.47
CHMP4B-201ENST00000217402 RCBTB2O95199 551 aa24.25■■□□□ 1.47
CHMP4B-201ENST00000217402 TP53P04637 393 aaPredicted RBP24.25■■□□□ 1.47
CHMP4B-201ENST00000217402 POU1F1P28069 291 aa24.25■■□□□ 1.47
CHMP4B-201ENST00000217402 CLEC12AQ5QGZ9 265 aa24.25■■□□□ 1.47
CHMP4B-201ENST00000217402 EEF1A1P5Q5VTE0 462 aa24.25■■□□□ 1.47
CHMP4B-201ENST00000217402 PXKQ7Z7A4 578 aa24.25■■□□□ 1.47
CHMP4B-201ENST00000217402 TUSC5Q8IXB3 177 aa24.25■■□□□ 1.47
CHMP4B-201ENST00000217402 GALNT4Q8N4A0 578 aa24.25■■□□□ 1.47
CHMP4B-201ENST00000217402 ANKK1Q8NFD2 765 aa24.25■■□□□ 1.47
CHMP4B-201ENST00000217402 NRG4Q8WWG1 115 aa24.25■■□□□ 1.47
CHMP4B-201ENST00000217402 VKORC1Q9BQB6 163 aa24.25■■□□□ 1.47
CHMP4B-201ENST00000217402 TBC1D23Q9NUY8 699 aa24.25■■□□□ 1.47
CHMP4B-201ENST00000217402 USE1Q9NZ43 259 aa24.25■■□□□ 1.47
CHMP4B-201ENST00000217402 NOX1Q9Y5S8 564 aa24.25■■□□□ 1.47
CHMP4B-201ENST00000217402 CCL21O00585 134 aa24.24■■□□□ 1.47
CHMP4B-201ENST00000217402 OSMP13725 252 aa24.24■■□□□ 1.47
CHMP4B-201ENST00000217402 SLC16A1P53985 500 aa24.24■■□□□ 1.47
CHMP4B-201ENST00000217402 POU4F3Q15319 338 aa24.24■■□□□ 1.47
CHMP4B-201ENST00000217402 RFX4Q33E94 735 aa24.24■■□□□ 1.47
CHMP4B-201ENST00000217402 OR2A2Q6IF42 318 aa24.24■■□□□ 1.47
CHMP4B-201ENST00000217402 FJX1Q86VR8 437 aa24.24■■□□□ 1.47
CHMP4B-201ENST00000217402 LRRC75AQ8NAA5 344 aa24.24■■□□□ 1.47
CHMP4B-201ENST00000217402 OR8D4Q8NGM9 314 aa24.24■■□□□ 1.47
CHMP4B-201ENST00000217402 NDEL1Q9GZM8 345 aa24.24■■□□□ 1.47
CHMP4B-201ENST00000217402 IL2RAP01589 272 aa24.24■■□□□ 1.47
CHMP4B-201ENST00000217402 CTXN1P60606 82 aa24.24■■□□□ 1.47
CHMP4B-201ENST00000217402 TOP3AQ13472 1001 aaPredicted RBP24.24■■□□□ 1.47
CHMP4B-201ENST00000217402 OR52L1Q8NGH7 329 aa24.24■■□□□ 1.47
CHMP4B-201ENST00000217402 GMPPAQ96IJ6 420 aaPredicted RBP24.24■■□□□ 1.47
CHMP4B-201ENST00000217402 ZNF385AQ96PM9 386 aaKnown RBP24.24■■□□□ 1.47
CHMP4B-201ENST00000217402 DMRTA2Q96SC8 542 aa24.24■■□□□ 1.47
CHMP4B-201ENST00000217402 KATNB1Q9BVA0 655 aa24.24■■□□□ 1.47
CHMP4B-201ENST00000217402 FANCFQ9NPI8 374 aa24.24■■□□□ 1.47
CHMP4B-201ENST00000217402 MED29Q9NX70 200 aa24.24■■□□□ 1.47
CHMP4B-201ENST00000217402 IL20Q9NYY1 176 aa24.24■■□□□ 1.47
CHMP4B-201ENST00000217402 EMC3Q9P0I2 261 aa24.24■■□□□ 1.47
CHMP4B-201ENST00000217402 ORC6Q9Y5N6 252 aa24.24■■□□□ 1.47
CHMP4B-201ENST00000217402 FLVCR1Q9Y5Y0 555 aa24.24■■□□□ 1.47
CHMP4B-201ENST00000217402 IGKV3D-15A0A087WSY6 115 aa24.23■■□□□ 1.47
CHMP4B-201ENST00000217402 PYCARD-AS1I3L0S3 204 aa24.23■■□□□ 1.47
CHMP4B-201ENST00000217402 TRAF3IP2O43734 574 aaPredicted RBP24.23■■□□□ 1.47
CHMP4B-201ENST00000217402 IFNGR1P15260 489 aa24.23■■□□□ 1.47
CHMP4B-201ENST00000217402 SLC6A6P31641 620 aa24.23■■□□□ 1.47
CHMP4B-201ENST00000217402 TIMP3P35625 211 aa24.23■■□□□ 1.47
CHMP4B-201ENST00000217402 ERVK-25P63136 954 aa24.23■■□□□ 1.47
CHMP4B-201ENST00000217402 SIRPAP78324 504 aa24.23■■□□□ 1.47
CHMP4B-201ENST00000217402 FOXF2Q12947 444 aa24.23■■□□□ 1.47
CHMP4B-201ENST00000217402 PDK3Q15120 406 aa24.23■■□□□ 1.47
CHMP4B-201ENST00000217402 RPL13AP3Q6NVV1 102 aa24.23■■□□□ 1.47
CHMP4B-201ENST00000217402 CREB3L2Q70SY1 520 aa24.23■■□□□ 1.47
CHMP4B-201ENST00000217402 PARP8Q8N3A8 854 aa24.23■■□□□ 1.47
CHMP4B-201ENST00000217402 CLDN22Q8N7P3 220 aa24.23■■□□□ 1.47
CHMP4B-201ENST00000217402 NAXEQ8NCW5 288 aa24.23■■□□□ 1.47
CHMP4B-201ENST00000217402 TEX47Q8TBZ9 253 aa24.23■■□□□ 1.47
CHMP4B-201ENST00000217402 IFT27Q9BW83 186 aa24.23■■□□□ 1.47
CHMP4B-201ENST00000217402 POLDIP3Q9BY77 421 aaKnown RBP24.23■■□□□ 1.47
CHMP4B-201ENST00000217402 BCO1Q9HAY6 547 aa24.23■■□□□ 1.47
CHMP4B-201ENST00000217402 ADAM18Q9Y3Q7 739 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms