RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 NKX6-2Q9C056 277 aaPredicted RBP13.64□□□□□ -0.23
SPTLC2-201ENST00000216484 SPHK1Q9NYA1 384 aa13.64□□□□□ -0.23
SPTLC2-201ENST00000216484 BMP1P13497 986 aa13.64□□□□□ -0.23
SPTLC2-201ENST00000216484 GMPRP36959 345 aa13.64□□□□□ -0.23
SPTLC2-201ENST00000216484 IGDCC3Q8IVU1 814 aa13.64□□□□□ -0.23
SPTLC2-201ENST00000216484 ZC3HAV1LQ96H79 300 aaKnown RBP13.64□□□□□ -0.23
SPTLC2-201ENST00000216484 ARHGDIGQ99819 225 aa13.64□□□□□ -0.23
SPTLC2-201ENST00000216484 INSL5Q9Y5Q6 135 aa13.64□□□□□ -0.23
SPTLC2-201ENST00000216484 ABCA1O95477 2261 aa13.64□□□□□ -0.23
SPTLC2-201ENST00000216484 UBR1Q8IWV7 1749 aa13.64□□□□□ -0.23
SPTLC2-201ENST00000216484 PMS2P1A4D2B8 440 aa13.63□□□□□ -0.23
SPTLC2-201ENST00000216484 GABRA5P31644 462 aa13.63□□□□□ -0.23
SPTLC2-201ENST00000216484 OR4D1Q15615 310 aa13.63□□□□□ -0.23
SPTLC2-201ENST00000216484 ACKR1Q16570 336 aa13.63□□□□□ -0.23
SPTLC2-201ENST00000216484 CD300LGQ6UXG3 332 aa13.63□□□□□ -0.23
SPTLC2-201ENST00000216484 SLC16A14Q7RTX9 510 aa13.63□□□□□ -0.23
SPTLC2-201ENST00000216484 OR10G3Q8NGC4 313 aa13.63□□□□□ -0.23
SPTLC2-201ENST00000216484 ITPKCQ96DU7 683 aa13.63□□□□□ -0.23
SPTLC2-201ENST00000216484 ADOQ96SZ5 270 aa13.63□□□□□ -0.23
SPTLC2-201ENST00000216484 GON7Q9BXV9 100 aa13.63□□□□□ -0.23
SPTLC2-201ENST00000216484 GABRPO00591 440 aa13.63□□□□□ -0.23
SPTLC2-201ENST00000216484 NPY1RP25929 384 aa13.63□□□□□ -0.23
SPTLC2-201ENST00000216484 OR2M3Q8NG83 312 aa13.63□□□□□ -0.23
SPTLC2-201ENST00000216484 SLC35B2Q8TB61 432 aa13.63□□□□□ -0.23
SPTLC2-201ENST00000216484 KAZALD1Q96I82 304 aa13.63□□□□□ -0.23
SPTLC2-201ENST00000216484 NXF2Q9GZY0 626 aaKnown RBP13.63□□□□□ -0.23
SPTLC2-201ENST00000216484 ANKMY1Q9P2S6 941 aa13.63□□□□□ -0.23
SPTLC2-201ENST00000216484 COL5A2P05997 1499 aaPredicted RBP13.63□□□□□ -0.23
SPTLC2-201ENST00000216484 KIAA1217Q5T5P2 1943 aa13.63□□□□□ -0.23
SPTLC2-201ENST00000216484 SPINT2O43291 252 aa13.63□□□□□ -0.23
SPTLC2-201ENST00000216484 PSMB2P49721 201 aa13.63□□□□□ -0.23
SPTLC2-201ENST00000216484 ZNF90Q03938 601 aa13.63□□□□□ -0.23
SPTLC2-201ENST00000216484 ELAVL3Q14576 367 aaKnown RBP13.63□□□□□ -0.23
SPTLC2-201ENST00000216484 GDPGP1Q6ZNW5 385 aa13.63□□□□□ -0.23
SPTLC2-201ENST00000216484 BORCS6Q96GS4 357 aa13.63□□□□□ -0.23
SPTLC2-201ENST00000216484 AMBRA1Q9C0C7 1298 aa13.63□□□□□ -0.23
SPTLC2-201ENST00000216484 SEMA4GQ9NTN9 838 aa13.63□□□□□ -0.23
SPTLC2-201ENST00000216484 SLC22A7Q9Y694 548 aa13.63□□□□□ -0.23
SPTLC2-201ENST00000216484 EIF3FO00303 357 aaPredicted RBP13.63□□□□□ -0.23
SPTLC2-201ENST00000216484 BLVRBP30043 206 aaPredicted RBP13.63□□□□□ -0.23
SPTLC2-201ENST00000216484 OR2B8PP59922 312 aa13.63□□□□□ -0.23
SPTLC2-201ENST00000216484 TMEM268Q5VZI3 342 aa13.63□□□□□ -0.23
SPTLC2-201ENST00000216484 SEC22CQ9BRL7 303 aa13.63□□□□□ -0.23
SPTLC2-201ENST00000216484 INTS6Q9UL03 887 aaKnown RBP13.63□□□□□ -0.23
SPTLC2-201ENST00000216484 CDC14CA4D256 554 aa13.63□□□□□ -0.23
SPTLC2-201ENST00000216484 I6L893 689 aaPredicted RBP13.63□□□□□ -0.23
SPTLC2-201ENST00000216484 FRS3O43559 492 aa13.63□□□□□ -0.23
SPTLC2-201ENST00000216484 NME2P1O60361 137 aa13.63□□□□□ -0.23
SPTLC2-201ENST00000216484 RFC3P40938 356 aa13.63□□□□□ -0.23
SPTLC2-201ENST00000216484 H3F3CQ6NXT2 135 aa13.63□□□□□ -0.23
SPTLC2-201ENST00000216484 SLC35F3Q8IY50 421 aa13.63□□□□□ -0.23
SPTLC2-201ENST00000216484 MMP21Q8N119 569 aa13.63□□□□□ -0.23
SPTLC2-201ENST00000216484 OR5D18Q8NGL1 313 aa13.63□□□□□ -0.23
SPTLC2-201ENST00000216484 HLA-CQ95604 372 aa13.63□□□□□ -0.23
SPTLC2-201ENST00000216484 ULBP2Q9BZM5 246 aa13.63□□□□□ -0.23
SPTLC2-201ENST00000216484 ITGAMP11215 1152 aa13.63□□□□□ -0.23
SPTLC2-201ENST00000216484 IRF2BP1Q8IU81 584 aa13.63□□□□□ -0.23
SPTLC2-201ENST00000216484 GSTO2Q9H4Y5 243 aa13.63□□□□□ -0.23
SPTLC2-201ENST00000216484 TMEM212A6NML5 194 aa13.63□□□□□ -0.23
SPTLC2-201ENST00000216484 MRPL33O75394 65 aaKnown RBP13.63□□□□□ -0.23
SPTLC2-201ENST00000216484 GUK1Q16774 197 aa13.63□□□□□ -0.23
SPTLC2-201ENST00000216484 OR56B1Q8NGI3 324 aa13.63□□□□□ -0.23
SPTLC2-201ENST00000216484 MARC2Q969Z3 335 aa13.63□□□□□ -0.23
SPTLC2-201ENST00000216484 NKX6-3A6NJ46 265 aa13.62□□□□□ -0.23
SPTLC2-201ENST00000216484 ZNF587BE7ETH6 402 aa13.62□□□□□ -0.23
SPTLC2-201ENST00000216484 RAB40BQ12829 278 aa13.62□□□□□ -0.23
SPTLC2-201ENST00000216484 PIWIL3Q7Z3Z3 882 aaKnown RBP13.62□□□□□ -0.23
SPTLC2-201ENST00000216484 ZNF516Q92618 1163 aa13.62□□□□□ -0.23
SPTLC2-201ENST00000216484 LHX6Q9UPM6 363 aa13.62□□□□□ -0.23
SPTLC2-201ENST00000216484 SSSCA1O60232 199 aa13.62□□□□□ -0.23
SPTLC2-201ENST00000216484 NR0B2Q15466 257 aa13.62□□□□□ -0.23
SPTLC2-201ENST00000216484 EMC9Q9Y3B6 208 aa13.62□□□□□ -0.23
SPTLC2-201ENST00000216484 COCHO43405 550 aa13.62□□□□□ -0.23
SPTLC2-201ENST00000216484 MPC1LP0DKB6 136 aa13.62□□□□□ -0.23
SPTLC2-201ENST00000216484 TIPARPQ7Z3E1 657 aaKnown RBP13.62□□□□□ -0.23
SPTLC2-201ENST00000216484 UTP4Q969X6 686 aaKnown RBP13.62□□□□□ -0.23
SPTLC2-201ENST00000216484 APIPQ96GX9 242 aa13.62□□□□□ -0.23
SPTLC2-201ENST00000216484 HELTA6NFD8 242 aa13.62□□□□□ -0.23
SPTLC2-201ENST00000216484 ADAM23O75077 832 aa13.62□□□□□ -0.23
SPTLC2-201ENST00000216484 ZNF623O75123 536 aa13.62□□□□□ -0.23
SPTLC2-201ENST00000216484 GRPP07492 148 aa13.62□□□□□ -0.23
SPTLC2-201ENST00000216484 CFHP08603 1231 aa13.62□□□□□ -0.23
SPTLC2-201ENST00000216484 GNB2P62879 340 aa13.62□□□□□ -0.23
SPTLC2-201ENST00000216484 STEAP1BQ6NZ63 245 aa13.62□□□□□ -0.23
SPTLC2-201ENST00000216484 TANKQ92844 425 aa13.62□□□□□ -0.23
SPTLC2-201ENST00000216484 IKZF5Q9H5V7 419 aa13.62□□□□□ -0.23
SPTLC2-201ENST00000216484 DIP2BQ9P265 1576 aa13.62□□□□□ -0.23
SPTLC2-201ENST00000216484 SOWAHBA6NEL2 793 aa13.62□□□□□ -0.23
SPTLC2-201ENST00000216484 KIAA1324LA8MWY0 1029 aaPredicted RBP13.62□□□□□ -0.23
SPTLC2-201ENST00000216484 F10P00742 488 aa13.62□□□□□ -0.23
SPTLC2-201ENST00000216484 LAMP1P11279 417 aa13.62□□□□□ -0.23
SPTLC2-201ENST00000216484 LMAN2Q12907 356 aa13.62□□□□□ -0.23
SPTLC2-201ENST00000216484 PRR27Q6MZM9 219 aa13.62□□□□□ -0.23
SPTLC2-201ENST00000216484 Q6ZTK2 550 aa13.62□□□□□ -0.23
SPTLC2-201ENST00000216484 SLCO2A1Q92959 643 aa13.62□□□□□ -0.23
SPTLC2-201ENST00000216484 VAMP8Q9BV40 100 aa13.62□□□□□ -0.23
SPTLC2-201ENST00000216484 PDZK1IP1Q13113 114 aa13.62□□□□□ -0.23
SPTLC2-201ENST00000216484 BCL7AQ4VC05 210 aa13.62□□□□□ -0.23
SPTLC2-201ENST00000216484 UNC50Q53HI1 259 aa13.62□□□□□ -0.23
SPTLC2-201ENST00000216484 MEPCEQ7L2J0 689 aaKnown RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms