RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 GABRPO00591 440 aa12.93□□□□□ -0.34
RTFDC1-201ENST00000023939 OGG1O15527 345 aa12.93□□□□□ -0.34
RTFDC1-201ENST00000023939 TRIM3O75382 744 aaPredicted RBP12.93□□□□□ -0.34
RTFDC1-201ENST00000023939 ITGA10O75578 1167 aa12.93□□□□□ -0.34
RTFDC1-201ENST00000023939 RGS9O75916 674 aaPredicted RBP12.93□□□□□ -0.34
RTFDC1-201ENST00000023939 RENP00797 406 aa12.93□□□□□ -0.34
RTFDC1-201ENST00000023939 F8A1P23610 371 aa12.93□□□□□ -0.34
RTFDC1-201ENST00000023939 OR12D2P58182 307 aa12.93□□□□□ -0.34
RTFDC1-201ENST00000023939 RUNX1T1Q06455 604 aa12.93□□□□□ -0.34
RTFDC1-201ENST00000023939 PLPPR5Q32ZL2 321 aa12.93□□□□□ -0.34
RTFDC1-201ENST00000023939 EEF1A1P5Q5VTE0 462 aa12.93□□□□□ -0.34
RTFDC1-201ENST00000023939 BICRALQ6AI39 1079 aa12.93□□□□□ -0.34
RTFDC1-201ENST00000023939 OR5M10Q6IEU7 315 aa12.93□□□□□ -0.34
RTFDC1-201ENST00000023939 ARSKQ6UWY0 536 aa12.93□□□□□ -0.34
RTFDC1-201ENST00000023939 TMEM91Q6ZNR0 172 aa12.93□□□□□ -0.34
RTFDC1-201ENST00000023939 SSX6Q7RTT6 188 aa12.93□□□□□ -0.34
RTFDC1-201ENST00000023939 SLC16A9Q7RTY1 509 aa12.93□□□□□ -0.34
RTFDC1-201ENST00000023939 OR2M3Q8NG83 312 aa12.93□□□□□ -0.34
RTFDC1-201ENST00000023939 OR51L1Q8NGJ5 315 aa12.93□□□□□ -0.34
RTFDC1-201ENST00000023939 ZNF519Q8TB69 540 aa12.93□□□□□ -0.34
RTFDC1-201ENST00000023939 CHPT1Q8WUD6 406 aa12.93□□□□□ -0.34
RTFDC1-201ENST00000023939 WDFY2Q96P53 400 aa12.93□□□□□ -0.34
RTFDC1-201ENST00000023939 MNTQ99583 582 aa12.93□□□□□ -0.34
RTFDC1-201ENST00000023939 TMED9Q9BVK6 235 aa12.93□□□□□ -0.34
RTFDC1-201ENST00000023939 OR11A1Q9GZK7 315 aa12.93□□□□□ -0.34
RTFDC1-201ENST00000023939 KCNN2Q9H2S1 579 aa12.93□□□□□ -0.34
RTFDC1-201ENST00000023939 TXNIPQ9H3M7 391 aa12.93□□□□□ -0.34
RTFDC1-201ENST00000023939 SMURF1Q9HCE7 757 aa12.93□□□□□ -0.34
RTFDC1-201ENST00000023939 RPRD1BQ9NQG5 326 aaKnown RBP12.93□□□□□ -0.34
RTFDC1-201ENST00000023939 PCDHGA1Q9Y5H4 931 aa12.93□□□□□ -0.34
RTFDC1-201ENST00000023939 HRH3Q9Y5N1 445 aa12.93□□□□□ -0.34
RTFDC1-201ENST00000023939 KMT2EQ8IZD2 1858 aa12.93□□□□□ -0.34
RTFDC1-201ENST00000023939 MPDZO75970 2070 aa12.93□□□□□ -0.34
RTFDC1-201ENST00000023939 NSG1A0A0A6YYJ2 146 aa12.92□□□□□ -0.34
RTFDC1-201ENST00000023939 C2orf72A6NCS6 295 aa12.92□□□□□ -0.34
RTFDC1-201ENST00000023939 E9PI62 339 aa12.92□□□□□ -0.34
RTFDC1-201ENST00000023939 J3QLW9 94 aa12.92□□□□□ -0.34
RTFDC1-201ENST00000023939 LRRTM2O43300 516 aa12.92□□□□□ -0.34
RTFDC1-201ENST00000023939 ZNF19P17023 458 aa12.92□□□□□ -0.34
RTFDC1-201ENST00000023939 SDC2P34741 201 aa12.92□□□□□ -0.34
RTFDC1-201ENST00000023939 CENPAP49450 140 aa12.92□□□□□ -0.34
RTFDC1-201ENST00000023939 ZNF41P51814 821 aaPredicted RBP12.92□□□□□ -0.34
RTFDC1-201ENST00000023939 RPL27P61353 136 aaKnown RBP12.92□□□□□ -0.34
RTFDC1-201ENST00000023939 FOXF1Q12946 379 aa12.92□□□□□ -0.34
RTFDC1-201ENST00000023939 EIF3IQ13347 325 aaKnown RBP12.92□□□□□ -0.34
RTFDC1-201ENST00000023939 SF3A2Q15428 464 aaKnown RBP12.92□□□□□ -0.34
RTFDC1-201ENST00000023939 CCDC58Q4VC31 144 aa12.92□□□□□ -0.34
RTFDC1-201ENST00000023939 PPP1R32Q7Z5V6 425 aa12.92□□□□□ -0.34
RTFDC1-201ENST00000023939 SLC25A36Q96CQ1 311 aa12.92□□□□□ -0.34
RTFDC1-201ENST00000023939 DDIT4LQ96D03 193 aa12.92□□□□□ -0.34
RTFDC1-201ENST00000023939 MARCH7Q9H992 704 aa12.92□□□□□ -0.34
RTFDC1-201ENST00000023939 SH2D2AQ9NP31 389 aa12.92□□□□□ -0.34
RTFDC1-201ENST00000023939 FANCFQ9NPI8 374 aa12.92□□□□□ -0.34
RTFDC1-201ENST00000023939 NCDNQ9UBB6 729 aa12.92□□□□□ -0.34
RTFDC1-201ENST00000023939 ST6GALNAC2Q9UJ37 374 aa12.92□□□□□ -0.34
RTFDC1-201ENST00000023939 TCFL5Q9UL49 500 aa12.92□□□□□ -0.34
RTFDC1-201ENST00000023939 SELENOFO60613 162 aa12.91□□□□□ -0.34
RTFDC1-201ENST00000023939 SC5DO75845 299 aa12.91□□□□□ -0.34
RTFDC1-201ENST00000023939 ICAM2P13598 275 aa12.91□□□□□ -0.34
RTFDC1-201ENST00000023939 FKBP2P26885 142 aaKnown RBP12.91□□□□□ -0.34
RTFDC1-201ENST00000023939 NAA10P41227 235 aaPredicted RBP12.91□□□□□ -0.34
RTFDC1-201ENST00000023939 GBX2P52951 348 aaPredicted RBP12.91□□□□□ -0.34
RTFDC1-201ENST00000023939 MLF1P58340 268 aa12.91□□□□□ -0.34
RTFDC1-201ENST00000023939 ACKR1Q16570 336 aa12.91□□□□□ -0.34
RTFDC1-201ENST00000023939 RGS21Q2M5E4 152 aa12.91□□□□□ -0.34
RTFDC1-201ENST00000023939 ZNF684Q5T5D7 378 aa12.91□□□□□ -0.34
RTFDC1-201ENST00000023939 TIPARPQ7Z3E1 657 aaKnown RBP12.91□□□□□ -0.34
RTFDC1-201ENST00000023939 KCTD20Q7Z5Y7 419 aa12.91□□□□□ -0.34
RTFDC1-201ENST00000023939 MARCH9Q86YJ5 346 aa12.91□□□□□ -0.34
RTFDC1-201ENST00000023939 TIGD4Q8IY51 512 aa12.91□□□□□ -0.34
RTFDC1-201ENST00000023939 MS4A15Q8N5U1 240 aa12.91□□□□□ -0.34
RTFDC1-201ENST00000023939 OR6K6Q8NGW6 343 aa12.91□□□□□ -0.34
RTFDC1-201ENST00000023939 ZNF417Q8TAU3 575 aa12.91□□□□□ -0.34
RTFDC1-201ENST00000023939 POC1BQ8TC44 478 aa12.91□□□□□ -0.34
RTFDC1-201ENST00000023939 RPS4Y2Q8TD47 263 aa12.91□□□□□ -0.34
RTFDC1-201ENST00000023939 HAVCR2Q8TDQ0 301 aa12.91□□□□□ -0.34
RTFDC1-201ENST00000023939 AP3S1Q92572 193 aa12.91□□□□□ -0.34
RTFDC1-201ENST00000023939 PELI1Q96FA3 418 aa12.91□□□□□ -0.34
RTFDC1-201ENST00000023939 PGLYRP3Q96LB9 341 aa12.91□□□□□ -0.34
RTFDC1-201ENST00000023939 DCLRE1CQ96SD1 692 aaKnown RBP12.91□□□□□ -0.34
RTFDC1-201ENST00000023939 ZNF587Q96SQ5 575 aaPredicted RBP12.91□□□□□ -0.34
RTFDC1-201ENST00000023939 HDHD5Q9BXW7 423 aa12.91□□□□□ -0.34
RTFDC1-201ENST00000023939 FAM117AQ9C073 453 aa12.91□□□□□ -0.34
RTFDC1-201ENST00000023939 TMEM9BQ9NQ34 198 aa12.91□□□□□ -0.34
RTFDC1-201ENST00000023939 QPCTLQ9NXS2 382 aa12.91□□□□□ -0.34
RTFDC1-201ENST00000023939 VSX1Q9NZR4 365 aaPredicted RBP12.91□□□□□ -0.34
RTFDC1-201ENST00000023939 PLEKHB1Q9UF11 243 aaPredicted RBP12.91□□□□□ -0.34
RTFDC1-201ENST00000023939 UGT2A1Q9Y4X1 527 aa12.91□□□□□ -0.34
RTFDC1-201ENST00000023939 FKBP7Q9Y680 259 aa12.91□□□□□ -0.34
RTFDC1-201ENST00000023939 CCDC187A0A096LP49 1063 aa12.91□□□□□ -0.34
RTFDC1-201ENST00000023939 C4orf47A7E2U8 309 aa12.91□□□□□ -0.34
RTFDC1-201ENST00000023939 CTDSP2O14595 271 aa12.91□□□□□ -0.34
RTFDC1-201ENST00000023939 XKRYO14609 159 aa12.91□□□□□ -0.34
RTFDC1-201ENST00000023939 SNX4O95219 450 aa12.91□□□□□ -0.34
RTFDC1-201ENST00000023939 OR6A2O95222 327 aa12.91□□□□□ -0.34
RTFDC1-201ENST00000023939 CELA2AP08217 269 aa12.91□□□□□ -0.34
RTFDC1-201ENST00000023939 JMJD7P0C870 316 aa12.91□□□□□ -0.34
RTFDC1-201ENST00000023939 ADH6P28332 368 aa12.91□□□□□ -0.34
RTFDC1-201ENST00000023939 PYCR1P32322 319 aa12.91□□□□□ -0.34
RTFDC1-201ENST00000023939 EIF1P41567 113 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms