RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 HOXC5Q00444 222 aa13.78□□□□□ -0.2
ERCC1-201ENST00000013807 MFSD13AQ14CX5 517 aa13.78□□□□□ -0.2
ERCC1-201ENST00000013807 ZNF627Q7L945 461 aa13.78□□□□□ -0.2
ERCC1-201ENST00000013807 TMEM123Q8N131 208 aa13.78□□□□□ -0.2
ERCC1-201ENST00000013807 BHLHE22Q8NFJ8 381 aaPredicted RBP13.78□□□□□ -0.2
ERCC1-201ENST00000013807 IL17RDQ8NFM7 739 aa13.78□□□□□ -0.2
ERCC1-201ENST00000013807 TMEM158Q8WZ71 300 aa13.78□□□□□ -0.2
ERCC1-201ENST00000013807 SLC25A36Q96CQ1 311 aa13.78□□□□□ -0.2
ERCC1-201ENST00000013807 LRR1Q96L50 414 aa13.78□□□□□ -0.2
ERCC1-201ENST00000013807 KCNS3Q9BQ31 491 aa13.78□□□□□ -0.2
ERCC1-201ENST00000013807 SPATA5L1Q9BVQ7 753 aa13.78□□□□□ -0.2
ERCC1-201ENST00000013807 GPR35Q9HC97 309 aa13.78□□□□□ -0.2
ERCC1-201ENST00000013807 TCF7L2Q9NQB0 619 aa13.78□□□□□ -0.2
ERCC1-201ENST00000013807 VAPAQ9P0L0 249 aa13.78□□□□□ -0.2
ERCC1-201ENST00000013807 SLAMF8Q9P0V8 285 aa13.78□□□□□ -0.2
ERCC1-201ENST00000013807 SEC14L4Q9UDX3 406 aa13.78□□□□□ -0.2
ERCC1-201ENST00000013807 TRAV36DV7A0A075B6V5 113 aa13.77□□□□□ -0.21
ERCC1-201ENST00000013807 A0A087WUJ7 227 aa13.77□□□□□ -0.21
ERCC1-201ENST00000013807 A0A096LPE4 126 aa13.77□□□□□ -0.21
ERCC1-201ENST00000013807 A0A1W2PPZ6 126 aa13.77□□□□□ -0.21
ERCC1-201ENST00000013807 C5orf58C9J3I9 102 aa13.77□□□□□ -0.21
ERCC1-201ENST00000013807 MS4A18H0YCH9 400 aa13.77□□□□□ -0.21
ERCC1-201ENST00000013807 M0R082 166 aa13.77□□□□□ -0.21
ERCC1-201ENST00000013807 TRAF3IP2O43734 574 aaPredicted RBP13.77□□□□□ -0.21
ERCC1-201ENST00000013807 OR4A8P0C604 315 aa13.77□□□□□ -0.21
ERCC1-201ENST00000013807 GTF2E2P29084 291 aaKnown RBP13.77□□□□□ -0.21
ERCC1-201ENST00000013807 CALCRP30988 508 aa13.77□□□□□ -0.21
ERCC1-201ENST00000013807 ARR3P36575 388 aa13.77□□□□□ -0.21
ERCC1-201ENST00000013807 ARF1P84077 181 aaKnown RBP13.77□□□□□ -0.21
ERCC1-201ENST00000013807 CDK6Q00534 326 aa13.77□□□□□ -0.21
ERCC1-201ENST00000013807 POU3F1Q03052 451 aaPredicted RBP13.77□□□□□ -0.21
ERCC1-201ENST00000013807 HGFACQ04756 655 aa13.77□□□□□ -0.21
ERCC1-201ENST00000013807 ADRM1Q16186 407 aa13.77□□□□□ -0.21
ERCC1-201ENST00000013807 MS4A18Q3C1V0 323 aa13.77□□□□□ -0.21
ERCC1-201ENST00000013807 ALG10BQ5I7T1 473 aa13.77□□□□□ -0.21
ERCC1-201ENST00000013807 COMTD1Q86VU5 262 aa13.77□□□□□ -0.21
ERCC1-201ENST00000013807 C10orf111Q8N326 155 aa13.77□□□□□ -0.21
ERCC1-201ENST00000013807 SCAIQ8N9R8 606 aa13.77□□□□□ -0.21
ERCC1-201ENST00000013807 ZNF540Q8NDQ6 660 aa13.77□□□□□ -0.21
ERCC1-201ENST00000013807 PIK3C3Q8NEB9 887 aa13.77□□□□□ -0.21
ERCC1-201ENST00000013807 ZNF417Q8TAU3 575 aa13.77□□□□□ -0.21
ERCC1-201ENST00000013807 SLC47A1Q96FL8 570 aa13.77□□□□□ -0.21
ERCC1-201ENST00000013807 OR2M2Q96R28 347 aa13.77□□□□□ -0.21
ERCC1-201ENST00000013807 ZNF587Q96SQ5 575 aaPredicted RBP13.77□□□□□ -0.21
ERCC1-201ENST00000013807 DOK1Q99704 481 aa13.77□□□□□ -0.21
ERCC1-201ENST00000013807 PIMREGQ9BSJ6 248 aa13.77□□□□□ -0.21
ERCC1-201ENST00000013807 CCDC28BQ9BUN5 200 aa13.77□□□□□ -0.21
ERCC1-201ENST00000013807 PRR14Q9BWN1 585 aa13.77□□□□□ -0.21
ERCC1-201ENST00000013807 RPS6KB2Q9UBS0 482 aa13.77□□□□□ -0.21
ERCC1-201ENST00000013807 TESQ9UGI8 421 aaKnown RBP13.77□□□□□ -0.21
ERCC1-201ENST00000013807 CORINQ9Y5Q5 1042 aa13.77□□□□□ -0.21
ERCC1-201ENST00000013807 RNF212BA8MTL3 300 aa13.76□□□□□ -0.21
ERCC1-201ENST00000013807 ZNF99A8MXY4 864 aaPredicted RBP13.76□□□□□ -0.21
ERCC1-201ENST00000013807 POLR3GO15318 223 aaPredicted RBP13.76□□□□□ -0.21
ERCC1-201ENST00000013807 TPST1O60507 370 aa13.76□□□□□ -0.21
ERCC1-201ENST00000013807 LMX1BO60663 402 aa13.76□□□□□ -0.21
ERCC1-201ENST00000013807 GIFP27352 417 aa13.76□□□□□ -0.21
ERCC1-201ENST00000013807 GRPRP30550 384 aa13.76□□□□□ -0.21
ERCC1-201ENST00000013807 IDH3AP50213 366 aa13.76□□□□□ -0.21
ERCC1-201ENST00000013807 IDH3GP51553 393 aaPredicted RBP13.76□□□□□ -0.21
ERCC1-201ENST00000013807 STX1BP61266 288 aa13.76□□□□□ -0.21
ERCC1-201ENST00000013807 PAGE3Q5JUK9 113 aa13.76□□□□□ -0.21
ERCC1-201ENST00000013807 GCNT6Q5T4J0 391 aa13.76□□□□□ -0.21
ERCC1-201ENST00000013807 SWT1Q5T5J6 900 aaKnown RBP13.76□□□□□ -0.21
ERCC1-201ENST00000013807 KRT73Q86Y46 540 aa13.76□□□□□ -0.21
ERCC1-201ENST00000013807 PHC2Q8IXK0 858 aa13.76□□□□□ -0.21
ERCC1-201ENST00000013807 GPR137CQ8N3F9 429 aa13.76□□□□□ -0.21
ERCC1-201ENST00000013807 NFKBIDQ8NI38 313 aa13.76□□□□□ -0.21
ERCC1-201ENST00000013807 STON2Q8WXE9 905 aa13.76□□□□□ -0.21
ERCC1-201ENST00000013807 SPDL1Q96EA4 605 aa13.76□□□□□ -0.21
ERCC1-201ENST00000013807 ZNF837Q96EG3 531 aaPredicted RBP13.76□□□□□ -0.21
ERCC1-201ENST00000013807 ZNF75AQ96N20 296 aa13.76□□□□□ -0.21
ERCC1-201ENST00000013807 FOXN4Q96NZ1 517 aa13.76□□□□□ -0.21
ERCC1-201ENST00000013807 BEX2Q9BXY8 128 aa13.76□□□□□ -0.21
ERCC1-201ENST00000013807 SEC61A2Q9H9S3 476 aa13.76□□□□□ -0.21
ERCC1-201ENST00000013807 CRLF2Q9HC73 371 aa13.76□□□□□ -0.21
ERCC1-201ENST00000013807 B3GNT2Q9NY97 397 aa13.76□□□□□ -0.21
ERCC1-201ENST00000013807 KLHL14Q9P2G3 628 aa13.76□□□□□ -0.21
ERCC1-201ENST00000013807 CORO2BQ9UQ03 480 aa13.76□□□□□ -0.21
ERCC1-201ENST00000013807 A0A0B4J2E0 115 aa13.75□□□□□ -0.21
ERCC1-201ENST00000013807 A0A1B0GX12 115 aa13.75□□□□□ -0.21
ERCC1-201ENST00000013807 TMEM129A0AVI4 362 aa13.75□□□□□ -0.21
ERCC1-201ENST00000013807 ZNF503-AS2A6NEH8 195 aa13.75□□□□□ -0.21
ERCC1-201ENST00000013807 PRORSD1PA6NEY8 169 aa13.75□□□□□ -0.21
ERCC1-201ENST00000013807 VSTM5A8MXK1 200 aa13.75□□□□□ -0.21
ERCC1-201ENST00000013807 AKAP8O43823 692 aaKnown RBP13.75□□□□□ -0.21
ERCC1-201ENST00000013807 TPST2O60704 377 aa13.75□□□□□ -0.21
ERCC1-201ENST00000013807 ERLIN1O75477 346 aa13.75□□□□□ -0.21
ERCC1-201ENST00000013807 ATP4BP51164 291 aa13.75□□□□□ -0.21
ERCC1-201ENST00000013807 TUBA1BP68363 451 aa13.75□□□□□ -0.21
ERCC1-201ENST00000013807 TUBA4AP68366 448 aa13.75□□□□□ -0.21
ERCC1-201ENST00000013807 C1DQ13901 141 aaKnown RBP13.75□□□□□ -0.21
ERCC1-201ENST00000013807 CEACAM16Q2WEN9 425 aa13.75□□□□□ -0.21
ERCC1-201ENST00000013807 GLIPR1L2Q4G1C9 344 aa13.75□□□□□ -0.21
ERCC1-201ENST00000013807 AGBL2Q5U5Z8 902 aa13.75□□□□□ -0.21
ERCC1-201ENST00000013807 DLEU7Q6UYE1 221 aa13.75□□□□□ -0.21
ERCC1-201ENST00000013807 LINC00114Q6XXX2 140 aa13.75□□□□□ -0.21
ERCC1-201ENST00000013807 TUBA1AQ71U36 451 aa13.75□□□□□ -0.21
ERCC1-201ENST00000013807 MYPOPQ86VE0 399 aaPredicted RBP13.75□□□□□ -0.21
ERCC1-201ENST00000013807 C20orf196Q8IYI0 205 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms