RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Olfr1428Q0VDY1 314 aa10.67□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Zfp987Q32P14 633 aa10.67□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Gm10750Q3V0I0 133 aa10.67□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Ttf1Q62187 859 aa10.67□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Olfr1463Q7TQR3 310 aa10.67□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Olfr1349Q7TQV1 317 aa10.67□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Olfr843Q7TRG4 313 aa10.67□□□□□ -0.7
Col9a1-202ENSMUST00000088349 IfnkQ7TSL0 199 aa10.67□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Slitrk2Q810C0 846 aa10.67□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Ap5m1Q8BJ63 490 aa10.67□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Rfc3Q8R323 356 aaKnown RBP10.67□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Ndc1Q8VCB1 673 aaKnown RBP10.67□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Olfr781Q8VFZ8 311 aa10.67□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Zfp810Q99K45 461 aa10.67□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Cmpk1Q9DBP5 196 aa10.67□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Brix1Q9DCA5 353 aaKnown RBP10.67□□□□□ -0.7
Col9a1-202ENSMUST00000088349 DptQ9QZZ6 201 aa10.67□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Nup210Q9QY81 1886 aaKnown RBP10.67□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Gm8251F6VUT6 1994 aa10.67□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Gm21854A0A087WNM4 232 aa10.67□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Gm13090A2A899 111 aa10.67□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Tmed7D3YZZ5 224 aa10.67□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Olfr420E9Q4G0 321 aa10.67□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Vmn2r69G3XA45 850 aa10.67□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Gm21812J3QN84 227 aa10.67□□□□□ -0.7
Col9a1-202ENSMUST00000088349 P01809 118 aa10.67□□□□□ -0.7
Col9a1-202ENSMUST00000088349 C4bpaP08607 469 aa10.67□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Zfp13P10754 512 aa10.67□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Ppp2cbP62715 309 aa10.67□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Ppp2caP63330 309 aa10.67□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Rit1P70426 219 aa10.67□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Khdc4Q3TCX3 612 aa10.67□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Adam12Q61824 903 aa10.67□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Nudt15Q8BG93 170 aa10.67□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Kbtbd11Q8BNW9 633 aa10.67□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Fem1abQ8C0T1 654 aa10.67□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Nsun3Q8CCT7 348 aa10.67□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Mboat2Q8R3I2 519 aa10.67□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Olfr518Q8VEW1 333 aa10.67□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Wdr45Q91VM3 360 aa10.67□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Taar1Q923Y8 332 aa10.67□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Trappc2Q9CQP2 140 aa10.67□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Slc46a3Q9DC26 460 aa10.67□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Keg1Q9DCY0 295 aa10.67□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Uchl1Q9R0P9 223 aa10.67□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Gm5799E9Q2M1 201 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 1700080E11RikE9Q9G1 206 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Zfp870J3QMA4 560 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Ms4a18J3QN01 344 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Fpr-s1O08790 351 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Eef1a1P10126 462 aaKnown RBP10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Cd48P18181 240 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Gsx2P31316 305 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Clec10aP49300 304 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Snai2P97469 269 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Q5SPV6 233 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Cyb5d2Q5SSH8 263 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Eif1aQ60872 144 aaKnown RBP10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Dio1Q61153 257 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Tspan9Q8BJU2 239 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Gm9938Q8C3P5 112 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Fam221aQ8C790 301 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Gfm1Q8K0D5 751 aaKnown RBP10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 HinfpQ8K1K9 503 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Lyrm4Q8K215 91 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 RfesdQ8K2P6 157 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Olfr769Q8K501 312 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Olfr1261Q8VFB0 306 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Mrgpra5Q91ZC7 304 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Mrm1Q99J25 320 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Cnot9Q9JKY0 299 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Olfr1493-ps1A0A140LHU2 316 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Gm45736A0A1B0GS18 427 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Zfp345A2AQA1 561 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Morn1A2RTS7 477 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Lao1B1ARV3 523 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Gm5286E0CXI6 357 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Zfp605E9QAH2 694 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Fcgr3P08508 261 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 PrkcaP20444 672 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 GhrhrP32082 423 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 FstP47931 344 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 AcadlP51174 430 aaKnown RBP10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Ube2mP61082 183 aaKnown RBP10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Actr1aP61164 376 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Tgif1P70284 272 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Csf2raQ00941 388 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Agbl4Q09LZ8 540 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 1700066B19RikQ3TS39 127 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Gal3st4Q3V1B8 480 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Trp53i11Q4QQM4 189 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Ppp5cQ60676 499 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Nup62Q63850 526 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 NovQ64299 354 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Slc6a5Q761V0 799 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Eci3Q78JN3 317 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Crls1Q80ZM8 303 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Peli1Q8C669 418 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Gpr18Q8K1Z6 331 aa10.66□□□□□ -0.7
Col9a1-202ENSMUST00000088349 Rab38Q8QZZ8 211 aa10.66□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 25.7 ms