RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Gsx2P31316 305 aa9.49□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Cd63P41731 238 aa9.49□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Limk1P53668 647 aa9.49□□□□□ -0.89
Ubr1-201ENSMUST00000028728 VaspP70460 375 aaKnown RBP9.49□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Elavl4Q61701 385 aaKnown RBP9.49□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Ip6k1Q6PD10 433 aa9.49□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Kcnip4Q6PHZ8 250 aa9.49□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Trim46Q7TNM2 759 aa9.49□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Pcyt1bQ811Q9 369 aa9.49□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Timm29Q8BGX2 266 aa9.49□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Nupl2Q8CIC2 420 aaKnown RBP9.49□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Q9DAR0 182 aa9.49□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Fzd9Q9R216 592 aa9.49□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Gm13420A0A140LJJ2 248 aa9.49□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Ptx3P48759 381 aa9.49□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Nxt2Q3UNA4 142 aa9.49□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Timm8a2Q4FZG7 97 aa9.49□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Elavl3Q60900 367 aaKnown RBP9.49□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Olfr1134Q7TR43 312 aa9.49□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Olfr524Q7TRU0 318 aa9.49□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Poglut1Q8BYB9 392 aaKnown RBP9.49□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Tmprss11gQ8BZ10 417 aa9.49□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Ska3Q8C263 411 aa9.49□□□□□ -0.89
Ubr1-201ENSMUST00000028728 A930004D18RikQ8C8W7 157 aa9.49□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Neil1Q8K4Q6 389 aa9.49□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Elf5Q8VDK3 253 aa9.49□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Hrasls5Q9CPX5 270 aa9.49□□□□□ -0.89
Ubr1-201ENSMUST00000028728 SlirpQ9D8T7 112 aaKnown RBP9.49□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Mfsd1Q9DC37 464 aa9.49□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Sp6Q9ESX2 376 aa9.49□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Rabl2E9Q9D5 223 aa9.49□□□□□ -0.89
Ubr1-201ENSMUST00000028728 NgpO08692 167 aa9.49□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Rasd2P63032 266 aa9.49□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Doc2bP70169 412 aa9.49□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Npy1rQ04573 382 aa9.49□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Sox9Q04887 507 aa9.49□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Tstd2Q3U269 495 aa9.49□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Spata6Q3U6K5 488 aa9.49□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Ccdc106Q3ULM0 279 aa9.49□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Olfr151Q60893 309 aa9.49□□□□□ -0.89
Ubr1-201ENSMUST00000028728 OmgQ63912 440 aa9.49□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Pgr15lQ80T54 456 aa9.49□□□□□ -0.89
Ubr1-201ENSMUST00000028728 9130023H24RikQ8BG98 337 aa9.49□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Olfr350Q8VFP8 312 aa9.49□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Ppa1Q9D819 289 aa9.49□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Znfx1Q8R151 1909 aaKnown RBP9.49□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Ccdc9bA3KGF9 545 aa9.49□□□□□ -0.89
Ubr1-201ENSMUST00000028728 BC049352E9Q2Z6 85 aa9.49□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Zfp708F8VPP0 541 aa9.49□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Gm21812J3QN84 227 aa9.49□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Hoxa9P09631 271 aa9.49□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Wnt6P22727 364 aa9.49□□□□□ -0.89
Ubr1-201ENSMUST00000028728 St6gal1Q64685 403 aa9.49□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Gtdc1Q8BW56 445 aa9.49□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Olfr1020Q8VFK7 317 aa9.49□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Olfr1263Q8VG63 306 aa9.49□□□□□ -0.89
Ubr1-201ENSMUST00000028728 AldobQ91Y97 364 aa9.49□□□□□ -0.89
Ubr1-201ENSMUST00000028728 SmoxQ99K82 555 aa9.49□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Sgo1Q9CXH7 517 aa9.49□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Efcab10Q9D581 132 aa9.49□□□□□ -0.89
Ubr1-201ENSMUST00000028728 PbkQ9JJ78 330 aa9.49□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Zfp982A2A8Q4 368 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Gm3543D3Z235 184 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 SpxD3Z752 116 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Gm21767J3QPV5 180 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Pitx1P70314 315 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Klri2Q5DT36 248 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Rcc2Q8BK67 520 aaKnown RBP9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Gm10330Q8BKS1 112 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Timd2Q8R183 305 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Il34Q8R1R4 235 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Smarcd2Q99JR8 531 aaKnown RBP9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Gdpd3Q99LY2 330 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Mageh1Q9NWG9 218 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Ccdc88aQ5SNZ0 1873 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 8030474K03RikE9Q4Y8 554 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Gstp3F6RWR5 210 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 DxoO70348 397 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Tk1P04184 233 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Slc11a1P41251 548 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Fezf1Q0VDQ9 475 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 CstbQ62426 98 aaKnown RBP9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Olfr290Q7TS13 315 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Fbxl14Q8BID8 400 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Rhbdd3Q8BP97 385 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Slc25a21Q8BZ09 298 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Olfr1312Q8VF10 317 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 PxnQ8VI36 591 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Etfrf1Q91V16 86 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Ceacam2Q925P2 520 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Zmat5Q9CQR5 170 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Lat2Q9JHL0 203 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Pex14Q9R0A0 376 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Gm17655A0A1B0GT13 591 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Cela3aA2A9U8 283 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Olfr1218L7MU54 311 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 GbaP17439 515 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Acvr1P37172 509 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Igfbp2P47877 305 aa9.48□□□□□ -0.89
Ubr1-201ENSMUST00000028728 Olfr1428Q0VDY1 314 aa9.48□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 64.6 ms