RNA–Protein interactions for RNA: ENST00000639439.1

PTPRVP-204, Transcript of protein tyrosine phosphatase, receptor type V, pseudogene, humanhuman

TSL 1 (best)

Gene PTPRVP, Length 821 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRVP-204ENST00000639439 RBBP4Q09028 425 aa13.61□□□□□ -0.23
PTPRVP-204ENST00000639439 RUNDC3AQ59EK9 446 aa13.61□□□□□ -0.23
PTPRVP-204ENST00000639439 ALG10BQ5I7T1 473 aa13.61□□□□□ -0.23
PTPRVP-204ENST00000639439 C11orf71Q6IPW1 123 aa13.61□□□□□ -0.23
PTPRVP-204ENST00000639439 LSRQ86X29 649 aaPredicted RBP13.61□□□□□ -0.23
PTPRVP-204ENST00000639439 C10orf111Q8N326 155 aa13.61□□□□□ -0.23
PTPRVP-204ENST00000639439 DPP10Q8N608 796 aa13.61□□□□□ -0.23
PTPRVP-204ENST00000639439 C11orf65Q8NCR3 313 aa13.61□□□□□ -0.23
PTPRVP-204ENST00000639439 ANKK1Q8NFD2 765 aa13.61□□□□□ -0.23
PTPRVP-204ENST00000639439 OR6S1Q8NH40 331 aa13.61□□□□□ -0.23
PTPRVP-204ENST00000639439 MAGEE2Q8TD90 523 aaPredicted RBP13.61□□□□□ -0.23
PTPRVP-204ENST00000639439 TSPEARQ8WU66 669 aa13.61□□□□□ -0.23
PTPRVP-204ENST00000639439 OXGR1Q96P68 337 aa13.61□□□□□ -0.23
PTPRVP-204ENST00000639439 EPYCQ99645 322 aa13.61□□□□□ -0.23
PTPRVP-204ENST00000639439 CPPED1Q9BRF8 314 aaPredicted RBP13.61□□□□□ -0.23
PTPRVP-204ENST00000639439 CACNG6Q9BXT2 260 aa13.61□□□□□ -0.23
PTPRVP-204ENST00000639439 REG4Q9BYZ8 158 aa13.61□□□□□ -0.23
PTPRVP-204ENST00000639439 IKZF5Q9H5V7 419 aa13.61□□□□□ -0.23
PTPRVP-204ENST00000639439 ATP23Q9Y6H3 246 aa13.61□□□□□ -0.23
PTPRVP-204ENST00000639439 LOC102725191A0A1B0GVB3 256 aa13.6□□□□□ -0.23
PTPRVP-204ENST00000639439 RNF223E7ERA6 249 aa13.6□□□□□ -0.23
PTPRVP-204ENST00000639439 ANGPT2O15123 496 aa13.6□□□□□ -0.23
PTPRVP-204ENST00000639439 AKAP8O43823 692 aaKnown RBP13.6□□□□□ -0.23
PTPRVP-204ENST00000639439 TPST1O60507 370 aa13.6□□□□□ -0.23
PTPRVP-204ENST00000639439 LGI1O95970 557 aa13.6□□□□□ -0.23
PTPRVP-204ENST00000639439 UBE2NP61088 152 aaKnown RBP13.6□□□□□ -0.23
PTPRVP-204ENST00000639439 SLC25A3Q00325 362 aa13.6□□□□□ -0.23
PTPRVP-204ENST00000639439 C1DQ13901 141 aaKnown RBP13.6□□□□□ -0.23
PTPRVP-204ENST00000639439 ADRM1Q16186 407 aa13.6□□□□□ -0.23
PTPRVP-204ENST00000639439 TBRG1Q3YBR2 411 aa13.6□□□□□ -0.23
PTPRVP-204ENST00000639439 HIKESHIQ53FT3 197 aa13.6□□□□□ -0.23
PTPRVP-204ENST00000639439 HMBOX1Q6NT76 420 aa13.6□□□□□ -0.23
PTPRVP-204ENST00000639439 DNM1P46Q6ZS02 220 aa13.6□□□□□ -0.23
PTPRVP-204ENST00000639439 H1FNTQ75WM6 255 aaPredicted RBP13.6□□□□□ -0.23
PTPRVP-204ENST00000639439 DHDDSQ86SQ9 333 aa13.6□□□□□ -0.23
PTPRVP-204ENST00000639439 RANBP3LQ86VV4 465 aaPredicted RBP13.6□□□□□ -0.23
PTPRVP-204ENST00000639439 ARMC8Q8IUR7 673 aa13.6□□□□□ -0.23
PTPRVP-204ENST00000639439 ADPRHL1Q8NDY3 354 aa13.6□□□□□ -0.23
PTPRVP-204ENST00000639439 OR1K1Q8NGR3 316 aa13.6□□□□□ -0.23
PTPRVP-204ENST00000639439 TAAR8Q969N4 342 aa13.6□□□□□ -0.23
PTPRVP-204ENST00000639439 ALKBH3Q96Q83 286 aaPredicted RBP13.6□□□□□ -0.23
PTPRVP-204ENST00000639439 RSPO3Q9BXY4 272 aaPredicted RBP13.6□□□□□ -0.23
PTPRVP-204ENST00000639439 CORINQ9Y5Q5 1042 aa13.6□□□□□ -0.23
PTPRVP-204ENST00000639439 HEATR1Q9H583 2144 aaKnown RBP13.6□□□□□ -0.23
PTPRVP-204ENST00000639439 A0A087WUJ7 227 aa13.59□□□□□ -0.23
PTPRVP-204ENST00000639439 ARPC4-TTLL3A0A0A6YYG9 625 aa13.59□□□□□ -0.23
PTPRVP-204ENST00000639439 RPL36A-HNRNPH2H7BZ11 118 aa13.59□□□□□ -0.23
PTPRVP-204ENST00000639439 M0R082 166 aa13.59□□□□□ -0.23
PTPRVP-204ENST00000639439 EDF1O60869 148 aaKnown RBP13.59□□□□□ -0.23
PTPRVP-204ENST00000639439 NDUFS7O75251 213 aa13.59□□□□□ -0.23
PTPRVP-204ENST00000639439 SLC43A1O75387 559 aa13.59□□□□□ -0.23
PTPRVP-204ENST00000639439 PCSK6P29122 969 aa13.59□□□□□ -0.23
PTPRVP-204ENST00000639439 AQP1P29972 269 aa13.59□□□□□ -0.23
PTPRVP-204ENST00000639439 APOBEC3AP31941 199 aaPredicted RBP13.59□□□□□ -0.23
PTPRVP-204ENST00000639439 NUDT6P53370 316 aa13.59□□□□□ -0.23
PTPRVP-204ENST00000639439 CLDN17P56750 224 aa13.59□□□□□ -0.23
PTPRVP-204ENST00000639439 DSCR9P59020 149 aa13.59□□□□□ -0.23
PTPRVP-204ENST00000639439 CHRNB3Q05901 458 aa13.59□□□□□ -0.23
PTPRVP-204ENST00000639439 RAB35Q15286 201 aa13.59□□□□□ -0.23
PTPRVP-204ENST00000639439 CYP51A1Q16850 503 aa13.59□□□□□ -0.23
PTPRVP-204ENST00000639439 C3orf36Q3SXR2 165 aa13.59□□□□□ -0.23
PTPRVP-204ENST00000639439 GLIPR1L2Q4G1C9 344 aa13.59□□□□□ -0.23
PTPRVP-204ENST00000639439 SWT1Q5T5J6 900 aaKnown RBP13.59□□□□□ -0.23
PTPRVP-204ENST00000639439 METTL21CQ5VZV1 264 aa13.59□□□□□ -0.23
PTPRVP-204ENST00000639439 ANKRD16Q6P6B7 361 aa13.59□□□□□ -0.23
PTPRVP-204ENST00000639439 B3GLCTQ6Y288 498 aa13.59□□□□□ -0.23
PTPRVP-204ENST00000639439 COMTD1Q86VU5 262 aa13.59□□□□□ -0.23
PTPRVP-204ENST00000639439 SLC30A8Q8IWU4 369 aa13.59□□□□□ -0.23
PTPRVP-204ENST00000639439 KDM8Q8N371 416 aa13.59□□□□□ -0.23
PTPRVP-204ENST00000639439 ZNF417Q8TAU3 575 aa13.59□□□□□ -0.23
PTPRVP-204ENST00000639439 BCL2L2Q92843 193 aaPredicted RBP13.59□□□□□ -0.23
PTPRVP-204ENST00000639439 ANKRD27Q96NW4 1050 aa13.59□□□□□ -0.23
PTPRVP-204ENST00000639439 ZNF587Q96SQ5 575 aaPredicted RBP13.59□□□□□ -0.23
PTPRVP-204ENST00000639439 CGREF1Q99674 301 aa13.59□□□□□ -0.23
PTPRVP-204ENST00000639439 KCNS3Q9BQ31 491 aa13.59□□□□□ -0.23
PTPRVP-204ENST00000639439 RHNO1Q9BSD3 238 aa13.59□□□□□ -0.23
PTPRVP-204ENST00000639439 ZNF385DQ9H6B1 395 aa13.59□□□□□ -0.23
PTPRVP-204ENST00000639439 KLHL14Q9P2G3 628 aa13.59□□□□□ -0.23
PTPRVP-204ENST00000639439 B3GAT1Q9P2W7 334 aa13.59□□□□□ -0.23
PTPRVP-204ENST00000639439 GDF2Q9UK05 429 aaPredicted RBP13.59□□□□□ -0.23
PTPRVP-204ENST00000639439 ALPK2Q86TB3 2170 aa13.58□□□□□ -0.24
PTPRVP-204ENST00000639439 IGKV1D-42A0A075B6H8 117 aa13.58□□□□□ -0.24
PTPRVP-204ENST00000639439 A0A0B4J2E0 115 aa13.58□□□□□ -0.24
PTPRVP-204ENST00000639439 A0A1B0GX12 115 aa13.58□□□□□ -0.24
PTPRVP-204ENST00000639439 H7C417 338 aa13.58□□□□□ -0.24
PTPRVP-204ENST00000639439 SSX4O60224 188 aa13.58□□□□□ -0.24
PTPRVP-204ENST00000639439 FMO6PO60774 539 aa13.58□□□□□ -0.24
PTPRVP-204ENST00000639439 UPK3AO75631 287 aa13.58□□□□□ -0.24
PTPRVP-204ENST00000639439 ZNF432O94892 652 aa13.58□□□□□ -0.24
PTPRVP-204ENST00000639439 MFN2O95140 757 aa13.58□□□□□ -0.24
PTPRVP-204ENST00000639439 H2AFXP16104 143 aaPredicted RBP13.58□□□□□ -0.24
PTPRVP-204ENST00000639439 PTNP21246 168 aa13.58□□□□□ -0.24
PTPRVP-204ENST00000639439 GRPRP30550 384 aa13.58□□□□□ -0.24
PTPRVP-204ENST00000639439 PCBP3P57721 371 aaKnown RBP13.58□□□□□ -0.24
PTPRVP-204ENST00000639439 ROR2Q01974 943 aaKnown RBP13.58□□□□□ -0.24
PTPRVP-204ENST00000639439 OR1Q1Q15612 314 aa13.58□□□□□ -0.24
PTPRVP-204ENST00000639439 FAM169BQ8N8A8 192 aa13.58□□□□□ -0.24
PTPRVP-204ENST00000639439 SCAIQ8N9R8 606 aa13.58□□□□□ -0.24
PTPRVP-204ENST00000639439 PIK3C3Q8NEB9 887 aa13.58□□□□□ -0.24
PTPRVP-204ENST00000639439 RNF217Q8TC41 542 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms