RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 GTF2H4Q92759 462 aa14.67□□□□□ -0.06
SMN2-216ENST00000638794 KTI12Q96EK9 354 aaPredicted RBP14.67□□□□□ -0.06
SMN2-216ENST00000638794 ZNF317Q96PQ6 595 aaPredicted RBP14.67□□□□□ -0.06
SMN2-216ENST00000638794 BEX2Q9BXY8 128 aa14.67□□□□□ -0.06
SMN2-216ENST00000638794 LINC00470Q9BZP3 86 aa14.67□□□□□ -0.06
SMN2-216ENST00000638794 PAIP1Q9H074 479 aaKnown RBP14.67□□□□□ -0.06
SMN2-216ENST00000638794 SEC61A2Q9H9S3 476 aa14.67□□□□□ -0.06
SMN2-216ENST00000638794 A4GALTQ9NPC4 353 aa14.67□□□□□ -0.06
SMN2-216ENST00000638794 TMEM160Q9NX00 188 aa14.67□□□□□ -0.06
SMN2-216ENST00000638794 NKIRAS1Q9NYS0 192 aa14.67□□□□□ -0.06
SMN2-216ENST00000638794 CRNNQ9UBG3 495 aaPredicted RBP14.67□□□□□ -0.06
SMN2-216ENST00000638794 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.66□□□□□ -0.06
SMN2-216ENST00000638794 VWC2LB2RUY7 222 aa14.66□□□□□ -0.06
SMN2-216ENST00000638794 CLIC1O00299 241 aa14.66□□□□□ -0.06
SMN2-216ENST00000638794 ZNF432O94892 652 aa14.66□□□□□ -0.06
SMN2-216ENST00000638794 CECR9P0C854 216 aa14.66□□□□□ -0.06
SMN2-216ENST00000638794 BMP2P12643 396 aa14.66□□□□□ -0.06
SMN2-216ENST00000638794 ZNF43P17038 809 aa14.66□□□□□ -0.06
SMN2-216ENST00000638794 HOXB9P17482 250 aaPredicted RBP14.66□□□□□ -0.06
SMN2-216ENST00000638794 PAX7P23759 505 aa14.66□□□□□ -0.06
SMN2-216ENST00000638794 GTF2E2P29084 291 aaKnown RBP14.66□□□□□ -0.06
SMN2-216ENST00000638794 PDLIM4P50479 330 aa14.66□□□□□ -0.06
SMN2-216ENST00000638794 CLDN17P56750 224 aa14.66□□□□□ -0.06
SMN2-216ENST00000638794 LSM11P83369 360 aaKnown RBP eCLIP14.66□□□□□ -0.06
SMN2-216ENST00000638794 ROR2Q01974 943 aaKnown RBP14.66□□□□□ -0.06
SMN2-216ENST00000638794 NAAAQ02083 359 aa14.66□□□□□ -0.06
SMN2-216ENST00000638794 FADDQ13158 208 aa14.66□□□□□ -0.06
SMN2-216ENST00000638794 GGTLC2Q14390 218 aa14.66□□□□□ -0.06
SMN2-216ENST00000638794 ANKRD16Q6P6B7 361 aa14.66□□□□□ -0.06
SMN2-216ENST00000638794 SLC2A7Q6PXP3 512 aa14.66□□□□□ -0.06
SMN2-216ENST00000638794 ANKS4BQ8N8V4 417 aa14.66□□□□□ -0.06
SMN2-216ENST00000638794 BBS10Q8TAM1 723 aa14.66□□□□□ -0.06
SMN2-216ENST00000638794 MAGEE2Q8TD90 523 aaPredicted RBP14.66□□□□□ -0.06
SMN2-216ENST00000638794 TMEM158Q8WZ71 300 aa14.66□□□□□ -0.06
SMN2-216ENST00000638794 SLC35B4Q969S0 331 aa14.66□□□□□ -0.06
SMN2-216ENST00000638794 RSPO3Q9BXY4 272 aaPredicted RBP14.66□□□□□ -0.06
SMN2-216ENST00000638794 B3GAT1Q9P2W7 334 aa14.66□□□□□ -0.06
SMN2-216ENST00000638794 RCE1Q9Y256 329 aa14.66□□□□□ -0.06
SMN2-216ENST00000638794 NDUFS8O00217 210 aa14.65□□□□□ -0.06
SMN2-216ENST00000638794 PHF1O43189 567 aaPredicted RBP14.65□□□□□ -0.06
SMN2-216ENST00000638794 FZD7O75084 574 aa14.65□□□□□ -0.06
SMN2-216ENST00000638794 IGLV1-44P01699 117 aa14.65□□□□□ -0.06
SMN2-216ENST00000638794 OR4A8P0C604 315 aa14.65□□□□□ -0.06
SMN2-216ENST00000638794 CALCRP30988 508 aa14.65□□□□□ -0.06
SMN2-216ENST00000638794 SH3BGRP55822 239 aaPredicted RBP14.65□□□□□ -0.06
SMN2-216ENST00000638794 ADIPOQQ15848 244 aa14.65□□□□□ -0.06
SMN2-216ENST00000638794 C3orf36Q3SXR2 165 aa14.65□□□□□ -0.06
SMN2-216ENST00000638794 VHLLQ6RSH7 139 aa14.65□□□□□ -0.06
SMN2-216ENST00000638794 C6orf89Q6UWU4 347 aa14.65□□□□□ -0.06
SMN2-216ENST00000638794 SLC46A3Q7Z3Q1 461 aa14.65□□□□□ -0.06
SMN2-216ENST00000638794 MYPOPQ86VE0 399 aaPredicted RBP14.65□□□□□ -0.06
SMN2-216ENST00000638794 VRK1Q99986 396 aaPredicted RBP14.65□□□□□ -0.06
SMN2-216ENST00000638794 PIMREGQ9BSJ6 248 aa14.65□□□□□ -0.06
SMN2-216ENST00000638794 RAD21L1Q9H4I0 556 aa14.65□□□□□ -0.06
SMN2-216ENST00000638794 B9A039 149 aa14.64□□□□□ -0.07
SMN2-216ENST00000638794 C5orf58C9J3I9 102 aa14.64□□□□□ -0.07
SMN2-216ENST00000638794 RPL36A-HNRNPH2H7BZ11 118 aa14.64□□□□□ -0.07
SMN2-216ENST00000638794 M0R082 166 aa14.64□□□□□ -0.07
SMN2-216ENST00000638794 PDE5AO76074 875 aa14.64□□□□□ -0.07
SMN2-216ENST00000638794 IGKV3-15P01624 115 aa14.64□□□□□ -0.07
SMN2-216ENST00000638794 CELA3BP08861 270 aa14.64□□□□□ -0.07
SMN2-216ENST00000638794 HTR2AP28223 471 aa14.64□□□□□ -0.07
SMN2-216ENST00000638794 NR4A2P43354 598 aa14.64□□□□□ -0.07
SMN2-216ENST00000638794 GZMKP49863 264 aa14.64□□□□□ -0.07
SMN2-216ENST00000638794 ARF1P84077 181 aaKnown RBP14.64□□□□□ -0.07
SMN2-216ENST00000638794 EFNB3Q15768 340 aa14.64□□□□□ -0.07
SMN2-216ENST00000638794 CARTPTQ16568 116 aa14.64□□□□□ -0.07
SMN2-216ENST00000638794 COMTD1Q86VU5 262 aa14.64□□□□□ -0.07
SMN2-216ENST00000638794 ARIH2OSQ8N7S6 290 aa14.64□□□□□ -0.07
SMN2-216ENST00000638794 ZNF417Q8TAU3 575 aa14.64□□□□□ -0.07
SMN2-216ENST00000638794 TAAR8Q969N4 342 aa14.64□□□□□ -0.07
SMN2-216ENST00000638794 TLCD1Q96CP7 247 aa14.64□□□□□ -0.07
SMN2-216ENST00000638794 OXGR1Q96P68 337 aa14.64□□□□□ -0.07
SMN2-216ENST00000638794 ZNF587Q96SQ5 575 aaPredicted RBP14.64□□□□□ -0.07
SMN2-216ENST00000638794 PRR14Q9BWN1 585 aa14.64□□□□□ -0.07
SMN2-216ENST00000638794 SHARPINQ9H0F6 387 aa14.64□□□□□ -0.07
SMN2-216ENST00000638794 PLK3Q9H4B4 646 aa14.64□□□□□ -0.07
SMN2-216ENST00000638794 C12orf10Q9HB07 376 aa14.64□□□□□ -0.07
SMN2-216ENST00000638794 SLC25A37Q9NYZ2 338 aa14.64□□□□□ -0.07
SMN2-216ENST00000638794 RPS6KB2Q9UBS0 482 aa14.64□□□□□ -0.07
SMN2-216ENST00000638794 LPAR3Q9UBY5 353 aa14.64□□□□□ -0.07
SMN2-216ENST00000638794 USH1CQ9Y6N9 552 aa14.64□□□□□ -0.07
SMN2-216ENST00000638794 IGKV1D-42A0A075B6H8 117 aa14.63□□□□□ -0.07
SMN2-216ENST00000638794 IGHV4-61A0A0C4DH41 118 aa14.63□□□□□ -0.07
SMN2-216ENST00000638794 A0A1B0GWA3 101 aa14.63□□□□□ -0.07
SMN2-216ENST00000638794 LOC390937A0A1W2PQ73 354 aa14.63□□□□□ -0.07
SMN2-216ENST00000638794 ZNF503-AS2A6NEH8 195 aa14.63□□□□□ -0.07
SMN2-216ENST00000638794 AIM2O14862 343 aa14.63□□□□□ -0.07
SMN2-216ENST00000638794 ZNF500O60304 480 aaPredicted RBP14.63□□□□□ -0.07
SMN2-216ENST00000638794 LMX1BO60663 402 aa14.63□□□□□ -0.07
SMN2-216ENST00000638794 SLC43A1O75387 559 aa14.63□□□□□ -0.07
SMN2-216ENST00000638794 HOXB1P14653 301 aaPredicted RBP14.63□□□□□ -0.07
SMN2-216ENST00000638794 ETS2P15036 469 aa14.63□□□□□ -0.07
SMN2-216ENST00000638794 IGFBP5P24593 272 aa14.63□□□□□ -0.07
SMN2-216ENST00000638794 GRPRP30550 384 aa14.63□□□□□ -0.07
SMN2-216ENST00000638794 PRKAR1BP31321 381 aa14.63□□□□□ -0.07
SMN2-216ENST00000638794 FAM69AQ5T7M9 428 aa14.63□□□□□ -0.07
SMN2-216ENST00000638794 EPGNQ6UW88 154 aa14.63□□□□□ -0.07
SMN2-216ENST00000638794 MSRB3Q8IXL7 192 aa14.63□□□□□ -0.07
SMN2-216ENST00000638794 C10orf111Q8N326 155 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms