RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 KIAA1024LP59773 190 aa17.15■□□□□ 0.34
SCARB2-213ENST00000638680 KIR2DS5Q14953 304 aa17.15■□□□□ 0.34
SCARB2-213ENST00000638680 SFRP5Q5T4F7 317 aa17.15■□□□□ 0.34
SCARB2-213ENST00000638680 FAM213BQ8TBF2 198 aa17.15■□□□□ 0.34
SCARB2-213ENST00000638680 LINC01599Q8WXQ3 324 aa17.15■□□□□ 0.34
SCARB2-213ENST00000638680 MED30Q96HR3 178 aa17.15■□□□□ 0.34
SCARB2-213ENST00000638680 SPATA6Q9NWH7 488 aaPredicted RBP17.15■□□□□ 0.34
SCARB2-213ENST00000638680 A3GALT2U3KPV4 340 aa17.15■□□□□ 0.34
SCARB2-213ENST00000638680 MSTNO14793 375 aa17.15■□□□□ 0.34
SCARB2-213ENST00000638680 ZNF264O43296 627 aa17.15■□□□□ 0.34
SCARB2-213ENST00000638680 SUSD5O60279 629 aa17.15■□□□□ 0.34
SCARB2-213ENST00000638680 KCNK2O95069 426 aa17.15■□□□□ 0.34
SCARB2-213ENST00000638680 PAPLNO95428 1278 aa17.15■□□□□ 0.34
SCARB2-213ENST00000638680 SCGB1D1O95968 90 aa17.15■□□□□ 0.34
SCARB2-213ENST00000638680 FAM111BQ6SJ93 734 aa17.15■□□□□ 0.34
SCARB2-213ENST00000638680 PGAP1Q75T13 922 aa17.15■□□□□ 0.34
SCARB2-213ENST00000638680 OLIG3Q7RTU3 272 aa17.15■□□□□ 0.34
SCARB2-213ENST00000638680 OR2A12Q8NGT7 310 aa17.15■□□□□ 0.34
SCARB2-213ENST00000638680 RNF141Q8WVD5 230 aa17.15■□□□□ 0.34
SCARB2-213ENST00000638680 TMEM38AQ9H6F2 299 aa17.15■□□□□ 0.34
SCARB2-213ENST00000638680 SNRPGP62308 76 aaKnown RBP17.15■□□□□ 0.34
SCARB2-213ENST00000638680 OXA1LQ15070 435 aa17.15■□□□□ 0.34
SCARB2-213ENST00000638680 SLC39A11Q8N1S5 342 aa17.15■□□□□ 0.34
SCARB2-213ENST00000638680 NANOGP1Q8N7R0 232 aa17.15■□□□□ 0.34
SCARB2-213ENST00000638680 STEAP1Q9UHE8 339 aa17.15■□□□□ 0.34
SCARB2-213ENST00000638680 H0YGG7 62 aa17.15■□□□□ 0.34
SCARB2-213ENST00000638680 MAT1AQ00266 395 aaKnown RBP17.15■□□□□ 0.34
SCARB2-213ENST00000638680 PRSS45Q7RTY3 260 aa17.15■□□□□ 0.34
SCARB2-213ENST00000638680 SLC51BQ86UW2 128 aa17.15■□□□□ 0.34
SCARB2-213ENST00000638680 OR6T1Q8NGN1 323 aa17.15■□□□□ 0.34
SCARB2-213ENST00000638680 C22orf15Q8WYQ4 148 aa17.15■□□□□ 0.34
SCARB2-213ENST00000638680 GLIPR2Q9H4G4 154 aa17.15■□□□□ 0.34
SCARB2-213ENST00000638680 WDR76Q9H967 626 aa17.15■□□□□ 0.34
SCARB2-213ENST00000638680 RNF186Q9NXI6 227 aa17.15■□□□□ 0.34
SCARB2-213ENST00000638680 HAO2Q9NYQ3 351 aa17.15■□□□□ 0.34
SCARB2-213ENST00000638680 RGPD2P0DJD1 1756 aa17.15■□□□□ 0.34
SCARB2-213ENST00000638680 TRBV11-1A0A0K0K1C0 115 aa17.15■□□□□ 0.34
SCARB2-213ENST00000638680 ANKRD34BA5PLL1 514 aa17.15■□□□□ 0.34
SCARB2-213ENST00000638680 ATP6V1G2-DDX39BF2Z307 99 aa17.15■□□□□ 0.34
SCARB2-213ENST00000638680 ZNF740Q8NDX6 193 aa17.15■□□□□ 0.34
SCARB2-213ENST00000638680 SLC25A46Q96AG3 418 aa17.15■□□□□ 0.34
SCARB2-213ENST00000638680 RBMXL1Q96E39 390 aaKnown RBP17.15■□□□□ 0.34
SCARB2-213ENST00000638680 TMEM59Q9BXS4 323 aa17.15■□□□□ 0.34
SCARB2-213ENST00000638680 BLACEA4D250 179 aa17.14■□□□□ 0.33
SCARB2-213ENST00000638680 ADAM12O43184 909 aa17.14■□□□□ 0.33
SCARB2-213ENST00000638680 FOSL1P15407 271 aa17.14■□□□□ 0.33
SCARB2-213ENST00000638680 GPX2P18283 190 aa17.14■□□□□ 0.33
SCARB2-213ENST00000638680 TACR3P29371 465 aa17.14■□□□□ 0.33
SCARB2-213ENST00000638680 ZFP82Q8N141 532 aa17.14■□□□□ 0.33
SCARB2-213ENST00000638680 MED16Q9Y2X0 877 aa17.14■□□□□ 0.33
SCARB2-213ENST00000638680 PLGLAQ15195 96 aa17.14■□□□□ 0.33
SCARB2-213ENST00000638680 HMGN3Q15651 99 aa17.14■□□□□ 0.33
SCARB2-213ENST00000638680 TMUB2Q71RG4 321 aa17.14■□□□□ 0.33
SCARB2-213ENST00000638680 NLRP8Q86W28 1048 aa17.14■□□□□ 0.33
SCARB2-213ENST00000638680 OR9K2Q8NGE7 335 aa17.14■□□□□ 0.33
SCARB2-213ENST00000638680 SGK3Q96BR1 496 aa17.14■□□□□ 0.33
SCARB2-213ENST00000638680 MPPED1O15442 326 aa17.14■□□□□ 0.33
SCARB2-213ENST00000638680 FPR3P25089 353 aa17.14■□□□□ 0.33
SCARB2-213ENST00000638680 MKXQ8IYA7 352 aa17.14■□□□□ 0.33
SCARB2-213ENST00000638680 OR52N1Q8NH53 320 aa17.14■□□□□ 0.33
SCARB2-213ENST00000638680 TAAR8Q969N4 342 aa17.14■□□□□ 0.33
SCARB2-213ENST00000638680 AMDHD1Q96NU7 426 aa17.14■□□□□ 0.33
SCARB2-213ENST00000638680 FYTTD1Q96QD9 318 aaKnown RBP17.14■□□□□ 0.33
SCARB2-213ENST00000638680 MS4A8Q9BY19 250 aa17.14■□□□□ 0.33
SCARB2-213ENST00000638680 HCSTQ9UBK5 93 aa17.14■□□□□ 0.33
SCARB2-213ENST00000638680 TK1P04183 234 aa17.14■□□□□ 0.33
SCARB2-213ENST00000638680 ATP1B1P05026 303 aa17.14■□□□□ 0.33
SCARB2-213ENST00000638680 ZNF750Q32MQ0 723 aa17.14■□□□□ 0.33
SCARB2-213ENST00000638680 CD276Q5ZPR3 534 aa17.14■□□□□ 0.33
SCARB2-213ENST00000638680 ANKRD19PQ9H560 264 aa17.14■□□□□ 0.33
SCARB2-213ENST00000638680 MDFIC2A0A1B0GVS7 189 aa17.13■□□□□ 0.33
SCARB2-213ENST00000638680 CD53P19397 219 aa17.13■□□□□ 0.33
SCARB2-213ENST00000638680 PFN3P60673 137 aa17.13■□□□□ 0.33
SCARB2-213ENST00000638680 MRPS34P82930 218 aaKnown RBP17.13■□□□□ 0.33
SCARB2-213ENST00000638680 XKR7Q5GH72 579 aa17.13■□□□□ 0.33
SCARB2-213ENST00000638680 LDLRAD1Q5T700 205 aa17.13■□□□□ 0.33
SCARB2-213ENST00000638680 HEPHL1Q6MZM0 1159 aa17.13■□□□□ 0.33
SCARB2-213ENST00000638680 ETV7Q9Y603 341 aa17.13■□□□□ 0.33
SCARB2-213ENST00000638680 TRAPPC2LH3BP13 241 aa17.13■□□□□ 0.33
SCARB2-213ENST00000638680 BET1O15155 118 aa17.13■□□□□ 0.33
SCARB2-213ENST00000638680 REEP5Q00765 189 aa17.13■□□□□ 0.33
SCARB2-213ENST00000638680 ALKBH1Q13686 389 aaKnown RBP17.13■□□□□ 0.33
SCARB2-213ENST00000638680 CHTF18Q8WVB6 975 aa17.13■□□□□ 0.33
SCARB2-213ENST00000638680 OCSTAMPQ9BR26 566 aa17.13■□□□□ 0.33
SCARB2-213ENST00000638680 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.13■□□□□ 0.33
SCARB2-213ENST00000638680 MRPS28Q9Y2Q9 187 aaKnown RBP17.13■□□□□ 0.33
SCARB2-213ENST00000638680 ANKRD12Q6UB98 2062 aa17.13■□□□□ 0.33
SCARB2-213ENST00000638680 RAB38P57729 211 aa17.13■□□□□ 0.33
SCARB2-213ENST00000638680 ACSM1Q08AH1 577 aa17.13■□□□□ 0.33
SCARB2-213ENST00000638680 ZMAT1Q5H9K5 638 aa17.13■□□□□ 0.33
SCARB2-213ENST00000638680 CST9LP1Q5W188 147 aa17.13■□□□□ 0.33
SCARB2-213ENST00000638680 FAM3CQ92520 227 aa17.13■□□□□ 0.33
SCARB2-213ENST00000638680 RNF32Q9H0A6 362 aa17.13■□□□□ 0.33
SCARB2-213ENST00000638680 CITO14578 2027 aa17.13■□□□□ 0.33
SCARB2-213ENST00000638680 LALBAP00709 142 aa17.13■□□□□ 0.33
SCARB2-213ENST00000638680 PMP2P02689 132 aa17.13■□□□□ 0.33
SCARB2-213ENST00000638680 SRMP19623 302 aa17.13■□□□□ 0.33
SCARB2-213ENST00000638680 KDM8Q8N371 416 aa17.13■□□□□ 0.33
SCARB2-213ENST00000638680 SLC30A7Q8NEW0 376 aa17.13■□□□□ 0.33
SCARB2-213ENST00000638680 CPNE4Q96A23 557 aaPredicted RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms