RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 ZNF362Q5T0B9 420 aaPredicted RBP10.58□□□□□ -0.72
CLN6-223ENST00000637823 GPR139Q6DWJ6 353 aa10.58□□□□□ -0.72
CLN6-223ENST00000637823 BORAQ6PGQ7 559 aa10.58□□□□□ -0.72
CLN6-223ENST00000637823 INO80CQ6PI98 192 aaPredicted RBP10.58□□□□□ -0.72
CLN6-223ENST00000637823 ZNF773Q6PK81 442 aa10.58□□□□□ -0.72
CLN6-223ENST00000637823 TMPPEQ6ZT21 453 aa10.58□□□□□ -0.72
CLN6-223ENST00000637823 IGFN1Q86VF2 1251 aa10.58□□□□□ -0.72
CLN6-223ENST00000637823 SLC22A16Q86VW1 577 aa10.58□□□□□ -0.72
CLN6-223ENST00000637823 TMEM251Q8N6I4 163 aa10.58□□□□□ -0.72
CLN6-223ENST00000637823 FAM98AQ8NCA5 519 aaKnown RBP10.58□□□□□ -0.72
CLN6-223ENST00000637823 ZNF540Q8NDQ6 660 aa10.58□□□□□ -0.72
CLN6-223ENST00000637823 ADPRHL1Q8NDY3 354 aa10.58□□□□□ -0.72
CLN6-223ENST00000637823 ANKK1Q8NFD2 765 aa10.58□□□□□ -0.72
CLN6-223ENST00000637823 RFKQ969G6 155 aa10.58□□□□□ -0.72
CLN6-223ENST00000637823 MIB2Q96AX9 1013 aa10.58□□□□□ -0.72
CLN6-223ENST00000637823 DNAJA3Q96EY1 480 aa10.58□□□□□ -0.72
CLN6-223ENST00000637823 LRR1Q96L50 414 aa10.58□□□□□ -0.72
CLN6-223ENST00000637823 SFXN2Q96NB2 322 aa10.58□□□□□ -0.72
CLN6-223ENST00000637823 ZNF582Q96NG8 517 aaPredicted RBP10.58□□□□□ -0.72
CLN6-223ENST00000637823 DCBLD2Q96PD2 775 aa10.58□□□□□ -0.72
CLN6-223ENST00000637823 KATNB1Q9BVA0 655 aa10.58□□□□□ -0.72
CLN6-223ENST00000637823 TMEM185BQ9H7F4 350 aa10.58□□□□□ -0.72
CLN6-223ENST00000637823 CCNB1IP1Q9NPC3 277 aa10.58□□□□□ -0.72
CLN6-223ENST00000637823 INIPQ9NRY2 104 aa10.58□□□□□ -0.72
CLN6-223ENST00000637823 FKBP14Q9NWM8 211 aa10.58□□□□□ -0.72
CLN6-223ENST00000637823 DNAJC27Q9NZQ0 273 aa10.58□□□□□ -0.72
CLN6-223ENST00000637823 H2AFY2Q9P0M6 372 aaPredicted RBP10.58□□□□□ -0.72
CLN6-223ENST00000637823 B3GALT5Q9Y2C3 310 aa10.58□□□□□ -0.72
CLN6-223ENST00000637823 RPL36Q9Y3U8 105 aaKnown RBP10.58□□□□□ -0.72
CLN6-223ENST00000637823 DNAJC13O75165 2243 aa10.58□□□□□ -0.72
CLN6-223ENST00000637823 CEP295Q9C0D2 2601 aa10.57□□□□□ -0.72
CLN6-223ENST00000637823 ZNF407Q9C0G0 2248 aa10.57□□□□□ -0.72
CLN6-223ENST00000637823 A0A1W2PNR3 127 aa10.57□□□□□ -0.72
CLN6-223ENST00000637823 EFCAB10A6NFE3 127 aa10.57□□□□□ -0.72
CLN6-223ENST00000637823 FAM166BA8MTA8 275 aa10.57□□□□□ -0.72
CLN6-223ENST00000637823 PRR23D1E9PI22 279 aaPredicted RBP10.57□□□□□ -0.72
CLN6-223ENST00000637823 C11orf98E9PRG8 122 aa10.57□□□□□ -0.72
CLN6-223ENST00000637823 ACOT7O00154 380 aa10.57□□□□□ -0.72
CLN6-223ENST00000637823 EIF1BO60739 113 aaKnown RBP10.57□□□□□ -0.72
CLN6-223ENST00000637823 SLC2A10O95528 541 aa10.57□□□□□ -0.72
CLN6-223ENST00000637823 CLPTM1O96005 669 aa10.57□□□□□ -0.72
CLN6-223ENST00000637823 F13BP05160 661 aa10.57□□□□□ -0.72
CLN6-223ENST00000637823 SMIM18P0DKX4 95 aa10.57□□□□□ -0.72
CLN6-223ENST00000637823 PRR23D2P0DMB1 279 aaPredicted RBP10.57□□□□□ -0.72
CLN6-223ENST00000637823 HIST1H1CP16403 213 aaKnown RBP10.57□□□□□ -0.72
CLN6-223ENST00000637823 ZNF3P17036 446 aa10.57□□□□□ -0.72
CLN6-223ENST00000637823 PAICSP22234 425 aaKnown RBP10.57□□□□□ -0.72
CLN6-223ENST00000637823 AHCYP23526 432 aa10.57□□□□□ -0.72
CLN6-223ENST00000637823 ACVR2AP27037 513 aa10.57□□□□□ -0.72
CLN6-223ENST00000637823 SDHAP31040 664 aa10.57□□□□□ -0.72
CLN6-223ENST00000637823 RFC3P40938 356 aa10.57□□□□□ -0.72
CLN6-223ENST00000637823 MAGEA5P43359 124 aa10.57□□□□□ -0.72
CLN6-223ENST00000637823 DIO1P49895 249 aa10.57□□□□□ -0.72
CLN6-223ENST00000637823 CDH15P55291 814 aa10.57□□□□□ -0.72
CLN6-223ENST00000637823 GFRA1P56159 465 aa10.57□□□□□ -0.72
CLN6-223ENST00000637823 TMPRSS3P57727 454 aa10.57□□□□□ -0.72
CLN6-223ENST00000637823 CSNK2A1P68400 391 aaPredicted RBP10.57□□□□□ -0.72
CLN6-223ENST00000637823 SLC35A2P78381 396 aa10.57□□□□□ -0.72
CLN6-223ENST00000637823 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.57□□□□□ -0.72
CLN6-223ENST00000637823 PUDPQ08623 228 aa10.57□□□□□ -0.72
CLN6-223ENST00000637823 ITGADQ13349 1161 aa10.57□□□□□ -0.72
CLN6-223ENST00000637823 APOFQ13790 326 aa10.57□□□□□ -0.72
CLN6-223ENST00000637823 SLC10A1Q14973 349 aa10.57□□□□□ -0.72
CLN6-223ENST00000637823 AADACL4Q5VUY2 407 aa10.57□□□□□ -0.72
CLN6-223ENST00000637823 NXNL2Q5VZ03 156 aa10.57□□□□□ -0.72
CLN6-223ENST00000637823 CXXC5Q7LFL8 322 aaKnown RBP10.57□□□□□ -0.72
CLN6-223ENST00000637823 FAM122BQ7Z309 247 aa10.57□□□□□ -0.72
CLN6-223ENST00000637823 CPOQ8IVL8 374 aa10.57□□□□□ -0.72
CLN6-223ENST00000637823 GID4Q8IVV7 300 aa10.57□□□□□ -0.72
CLN6-223ENST00000637823 SLC39A7Q92504 469 aa10.57□□□□□ -0.72
CLN6-223ENST00000637823 GGHQ92820 318 aa10.57□□□□□ -0.72
CLN6-223ENST00000637823 PTP4A1Q93096 173 aa10.57□□□□□ -0.72
CLN6-223ENST00000637823 MYDGFQ969H8 173 aa10.57□□□□□ -0.72
CLN6-223ENST00000637823 RELTQ969Z4 430 aa10.57□□□□□ -0.72
CLN6-223ENST00000637823 KLHL15Q96M94 604 aa10.57□□□□□ -0.72
CLN6-223ENST00000637823 NAA11Q9BSU3 229 aaPredicted RBP10.57□□□□□ -0.72
CLN6-223ENST00000637823 TXNIPQ9H3M7 391 aa10.57□□□□□ -0.72
CLN6-223ENST00000637823 ACKR4Q9NPB9 350 aa10.57□□□□□ -0.72
CLN6-223ENST00000637823 FANCFQ9NPI8 374 aa10.57□□□□□ -0.72
CLN6-223ENST00000637823 BATF3Q9NR55 127 aa10.57□□□□□ -0.72
CLN6-223ENST00000637823 CNOT2Q9NZN8 540 aaKnown RBP10.57□□□□□ -0.72
CLN6-223ENST00000637823 GRHPRQ9UBQ7 328 aa10.57□□□□□ -0.72
CLN6-223ENST00000637823 SEC14L4Q9UDX3 406 aa10.57□□□□□ -0.72
CLN6-223ENST00000637823 ZNF346Q9UL40 294 aaKnown RBP10.57□□□□□ -0.72
CLN6-223ENST00000637823 GPR52Q9Y2T5 361 aa10.57□□□□□ -0.72
CLN6-223ENST00000637823 ADAM18Q9Y3Q7 739 aa10.57□□□□□ -0.72
CLN6-223ENST00000637823 ALPK2Q86TB3 2170 aa10.56□□□□□ -0.72
CLN6-223ENST00000637823 A0A0J9YW62 118 aa10.56□□□□□ -0.72
CLN6-223ENST00000637823 LOC102725191A0A1B0GVB3 256 aa10.56□□□□□ -0.72
CLN6-223ENST00000637823 A0A1W2PRG6 482 aa10.56□□□□□ -0.72
CLN6-223ENST00000637823 NPIPB13A6NJU9 1138 aa10.56□□□□□ -0.72
CLN6-223ENST00000637823 NPIPB4C9JG80 1138 aa10.56□□□□□ -0.72
CLN6-223ENST00000637823 MKRN2OSH3BPM6 223 aa10.56□□□□□ -0.72
CLN6-223ENST00000637823 PRODHO43272 600 aa10.56□□□□□ -0.72
CLN6-223ENST00000637823 SEC14L5O43304 696 aa10.56□□□□□ -0.72
CLN6-223ENST00000637823 DNPH1O43598 174 aa10.56□□□□□ -0.72
CLN6-223ENST00000637823 RGS10O43665 173 aa10.56□□□□□ -0.72
CLN6-223ENST00000637823 AKR7A3O95154 331 aa10.56□□□□□ -0.72
CLN6-223ENST00000637823 IGHMP01871 453 aa10.56□□□□□ -0.72
CLN6-223ENST00000637823 PIPP12273 146 aaPredicted RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms