RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 C3orf36Q3SXR2 165 aa16.07■□□□□ 0.16
CLN6-220ENST00000637450 ANKK1Q8NFD2 765 aa16.07■□□□□ 0.16
CLN6-220ENST00000637450 MAL2Q969L2 176 aa16.07■□□□□ 0.16
CLN6-220ENST00000637450 KTI12Q96EK9 354 aaPredicted RBP16.07■□□□□ 0.16
CLN6-220ENST00000637450 KCNS3Q9BQ31 491 aa16.07■□□□□ 0.16
CLN6-220ENST00000637450 REPIN1Q9BWE0 567 aaKnown RBP16.07■□□□□ 0.16
CLN6-220ENST00000637450 RSPO3Q9BXY4 272 aaPredicted RBP16.07■□□□□ 0.16
CLN6-220ENST00000637450 NELFAQ9H3P2 528 aa16.07■□□□□ 0.16
CLN6-220ENST00000637450 RAD21L1Q9H4I0 556 aa16.07■□□□□ 0.16
CLN6-220ENST00000637450 CA10Q9NS85 328 aa16.07■□□□□ 0.16
CLN6-220ENST00000637450 A0A096LPE4 126 aa16.06■□□□□ 0.16
CLN6-220ENST00000637450 A0A1W2PPZ6 126 aa16.06■□□□□ 0.16
CLN6-220ENST00000637450 RPL36A-HNRNPH2H7BZ11 118 aa16.06■□□□□ 0.16
CLN6-220ENST00000637450 ZNF500O60304 480 aaPredicted RBP16.06■□□□□ 0.16
CLN6-220ENST00000637450 FZD7O75084 574 aa16.06■□□□□ 0.16
CLN6-220ENST00000637450 IGLV1-44P01699 117 aa16.06■□□□□ 0.16
CLN6-220ENST00000637450 ZNF43P17038 809 aa16.06■□□□□ 0.16
CLN6-220ENST00000637450 HOXB9P17482 250 aaPredicted RBP16.06■□□□□ 0.16
CLN6-220ENST00000637450 PDLIM4P50479 330 aa16.06■□□□□ 0.16
CLN6-220ENST00000637450 SNRPD2P62316 118 aaKnown RBP16.06■□□□□ 0.16
CLN6-220ENST00000637450 ROR2Q01974 943 aaKnown RBP16.06■□□□□ 0.16
CLN6-220ENST00000637450 NAAAQ02083 359 aa16.06■□□□□ 0.16
CLN6-220ENST00000637450 FADDQ13158 208 aa16.06■□□□□ 0.16
CLN6-220ENST00000637450 SLC2A7Q6PXP3 512 aa16.06■□□□□ 0.16
CLN6-220ENST00000637450 EPGNQ6UW88 154 aa16.06■□□□□ 0.16
CLN6-220ENST00000637450 C6orf89Q6UWU4 347 aa16.06■□□□□ 0.16
CLN6-220ENST00000637450 FAM169BQ8N8A8 192 aa16.06■□□□□ 0.16
CLN6-220ENST00000637450 BBS10Q8TAM1 723 aa16.06■□□□□ 0.16
CLN6-220ENST00000637450 TMEM158Q8WZ71 300 aa16.06■□□□□ 0.16
CLN6-220ENST00000637450 TLCD1Q96CP7 247 aa16.06■□□□□ 0.16
CLN6-220ENST00000637450 OXGR1Q96P68 337 aa16.06■□□□□ 0.16
CLN6-220ENST00000637450 SORCS2Q96PQ0 1159 aa16.06■□□□□ 0.16
CLN6-220ENST00000637450 BEX2Q9BXY8 128 aa16.06■□□□□ 0.16
CLN6-220ENST00000637450 C12orf10Q9HB07 376 aa16.06■□□□□ 0.16
CLN6-220ENST00000637450 MOV10Q9HCE1 1003 aaKnown RBP16.06■□□□□ 0.16
CLN6-220ENST00000637450 B3GAT1Q9P2W7 334 aa16.06■□□□□ 0.16
CLN6-220ENST00000637450 RCE1Q9Y256 329 aa16.06■□□□□ 0.16
CLN6-220ENST00000637450 FKBP7Q9Y680 259 aa16.06■□□□□ 0.16
CLN6-220ENST00000637450 ARFGEF3Q5TH69 2177 aa16.05■□□□□ 0.16
CLN6-220ENST00000637450 B9A039 149 aa16.05■□□□□ 0.16
CLN6-220ENST00000637450 NDUFS8O00217 210 aa16.05■□□□□ 0.16
CLN6-220ENST00000637450 CECR9P0C854 216 aa16.05■□□□□ 0.16
CLN6-220ENST00000637450 ETS2P15036 469 aa16.05■□□□□ 0.16
CLN6-220ENST00000637450 MRPL19P49406 292 aaKnown RBP16.05■□□□□ 0.16
CLN6-220ENST00000637450 SH3BGRP55822 239 aaPredicted RBP16.05■□□□□ 0.16
CLN6-220ENST00000637450 CLDN17P56750 224 aa16.05■□□□□ 0.16
CLN6-220ENST00000637450 TUBA1BP68363 451 aa16.05■□□□□ 0.16
CLN6-220ENST00000637450 TUBA4AP68366 448 aa16.05■□□□□ 0.16
CLN6-220ENST00000637450 ADIPOQQ15848 244 aa16.05■□□□□ 0.16
CLN6-220ENST00000637450 TUBA1AQ71U36 451 aa16.05■□□□□ 0.16
CLN6-220ENST00000637450 PHC2Q8IXK0 858 aa16.05■□□□□ 0.16
CLN6-220ENST00000637450 LSMEM1Q8N8F7 131 aa16.05■□□□□ 0.16
CLN6-220ENST00000637450 TAAR8Q969N4 342 aa16.05■□□□□ 0.16
CLN6-220ENST00000637450 RPS6KB2Q9UBS0 482 aa16.05■□□□□ 0.16
CLN6-220ENST00000637450 SEC14L4Q9UDX3 406 aa16.05■□□□□ 0.16
CLN6-220ENST00000637450 USH1CQ9Y6N9 552 aa16.05■□□□□ 0.16
CLN6-220ENST00000637450 C5orf58C9J3I9 102 aa16.04■□□□□ 0.16
CLN6-220ENST00000637450 OR2T1O43869 369 aa16.04■□□□□ 0.16
CLN6-220ENST00000637450 SLC43A1O75387 559 aa16.04■□□□□ 0.16
CLN6-220ENST00000637450 PDE5AO76074 875 aa16.04■□□□□ 0.16
CLN6-220ENST00000637450 IGKV3-15P01624 115 aa16.04■□□□□ 0.16
CLN6-220ENST00000637450 OR4A8P0C604 315 aa16.04■□□□□ 0.16
CLN6-220ENST00000637450 CBR1P16152 277 aa16.04■□□□□ 0.16
CLN6-220ENST00000637450 ZNF16P17020 682 aaPredicted RBP16.04■□□□□ 0.16
CLN6-220ENST00000637450 GTF2E2P29084 291 aaKnown RBP16.04■□□□□ 0.16
CLN6-220ENST00000637450 CALCRP30988 508 aa16.04■□□□□ 0.16
CLN6-220ENST00000637450 PRKAR1BP31321 381 aa16.04■□□□□ 0.16
CLN6-220ENST00000637450 NR4A2P43354 598 aa16.04■□□□□ 0.16
CLN6-220ENST00000637450 GZMKP49863 264 aa16.04■□□□□ 0.16
CLN6-220ENST00000637450 ARF1P84077 181 aaKnown RBP16.04■□□□□ 0.16
CLN6-220ENST00000637450 EFNB3Q15768 340 aa16.04■□□□□ 0.16
CLN6-220ENST00000637450 C5orf46Q6UWT4 87 aa16.04■□□□□ 0.16
CLN6-220ENST00000637450 OR4F15Q8NGB8 312 aa16.04■□□□□ 0.16
CLN6-220ENST00000637450 VRK1Q99986 396 aaPredicted RBP16.04■□□□□ 0.16
CLN6-220ENST00000637450 PIMREGQ9BSJ6 248 aa16.04■□□□□ 0.16
CLN6-220ENST00000637450 PLK3Q9H4B4 646 aa16.04■□□□□ 0.16
CLN6-220ENST00000637450 SEC61A2Q9H9S3 476 aa16.04■□□□□ 0.16
CLN6-220ENST00000637450 TMBIM4Q9HC24 238 aa16.04■□□□□ 0.16
CLN6-220ENST00000637450 GPR35Q9HC97 309 aa16.04■□□□□ 0.16
CLN6-220ENST00000637450 SLC25A37Q9NYZ2 338 aa16.04■□□□□ 0.16
CLN6-220ENST00000637450 LPAR3Q9UBY5 353 aa16.04■□□□□ 0.16
CLN6-220ENST00000637450 LOC102725191A0A1B0GVB3 256 aa16.03■□□□□ 0.16
CLN6-220ENST00000637450 A0A1B0GWA3 101 aa16.03■□□□□ 0.16
CLN6-220ENST00000637450 AIM2O14862 343 aa16.03■□□□□ 0.16
CLN6-220ENST00000637450 LMX1BO60663 402 aa16.03■□□□□ 0.16
CLN6-220ENST00000637450 HTR2AP28223 471 aa16.03■□□□□ 0.16
CLN6-220ENST00000637450 HGFACQ04756 655 aa16.03■□□□□ 0.16
CLN6-220ENST00000637450 C1DQ13901 141 aaKnown RBP16.03■□□□□ 0.16
CLN6-220ENST00000637450 LRIF1Q5T3J3 769 aa16.03■□□□□ 0.16
CLN6-220ENST00000637450 FAM69AQ5T7M9 428 aa16.03■□□□□ 0.16
CLN6-220ENST00000637450 H1FNTQ75WM6 255 aaPredicted RBP16.03■□□□□ 0.16
CLN6-220ENST00000637450 SLC46A3Q7Z3Q1 461 aa16.03■□□□□ 0.16
CLN6-220ENST00000637450 NET1Q7Z628 596 aaPredicted RBP16.03■□□□□ 0.16
CLN6-220ENST00000637450 FUNDC1Q8IVP5 155 aa16.03■□□□□ 0.16
CLN6-220ENST00000637450 MSRB3Q8IXL7 192 aa16.03■□□□□ 0.16
CLN6-220ENST00000637450 GOLGA6L1Q8N7Z2 621 aa16.03■□□□□ 0.16
CLN6-220ENST00000637450 ANKS4BQ8N8V4 417 aa16.03■□□□□ 0.16
CLN6-220ENST00000637450 NUP37Q8NFH4 326 aa16.03■□□□□ 0.16
CLN6-220ENST00000637450 SLC38A4Q969I6 547 aa16.03■□□□□ 0.16
CLN6-220ENST00000637450 FOXN4Q96NZ1 517 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms