RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 RFPL4AA6NLU0 287 aa13.57□□□□□ -0.24
CACNA1A-220ENST00000635988 PRRT4C9JH25 899 aa13.57□□□□□ -0.24
CACNA1A-220ENST00000635988 RFPL4AL1F8VTS6 287 aa13.57□□□□□ -0.24
CACNA1A-220ENST00000635988 ZFPL1O95159 310 aa13.57□□□□□ -0.24
CACNA1A-220ENST00000635988 ZNF888P0CJ79 500 aaPredicted RBP13.57□□□□□ -0.24
CACNA1A-220ENST00000635988 CSRP2Q16527 193 aa13.57□□□□□ -0.24
CACNA1A-220ENST00000635988 TRMT12Q53H54 448 aaKnown RBP13.57□□□□□ -0.24
CACNA1A-220ENST00000635988 FHL5Q5TD97 284 aa13.57□□□□□ -0.24
CACNA1A-220ENST00000635988 OR7E24Q6IFN5 339 aa13.57□□□□□ -0.24
CACNA1A-220ENST00000635988 C12orf40Q86WS4 652 aa13.57□□□□□ -0.24
CACNA1A-220ENST00000635988 KCT2Q8NC54 265 aa13.57□□□□□ -0.24
CACNA1A-220ENST00000635988 OR4C16Q8NGL9 310 aa13.57□□□□□ -0.24
CACNA1A-220ENST00000635988 ALX4Q9H161 411 aaPredicted RBP13.57□□□□□ -0.24
CACNA1A-220ENST00000635988 TMEM138Q9NPI0 162 aa13.57□□□□□ -0.24
CACNA1A-220ENST00000635988 KLF2Q9Y5W3 355 aaPredicted RBP13.57□□□□□ -0.24
CACNA1A-220ENST00000635988 NPIPA5A0A0B4J1W7 369 aa13.56□□□□□ -0.24
CACNA1A-220ENST00000635988 IGLON5A6NGN9 336 aa13.56□□□□□ -0.24
CACNA1A-220ENST00000635988 NPIPA7E9PJI5 369 aa13.56□□□□□ -0.24
CACNA1A-220ENST00000635988 BRINP1O60477 761 aa13.56□□□□□ -0.24
CACNA1A-220ENST00000635988 KCNJ13O60928 360 aa13.56□□□□□ -0.24
CACNA1A-220ENST00000635988 SPDEFO95238 335 aa13.56□□□□□ -0.24
CACNA1A-220ENST00000635988 FCER2P06734 321 aa13.56□□□□□ -0.24
CACNA1A-220ENST00000635988 NPIPA8P0DM63 369 aa13.56□□□□□ -0.24
CACNA1A-220ENST00000635988 PTHLHP12272 177 aa13.56□□□□□ -0.24
CACNA1A-220ENST00000635988 EPCAMP16422 314 aa13.56□□□□□ -0.24
CACNA1A-220ENST00000635988 AK4P27144 223 aaPredicted RBP13.56□□□□□ -0.24
CACNA1A-220ENST00000635988 ITPKBP27987 946 aa13.56□□□□□ -0.24
CACNA1A-220ENST00000635988 SHEQ5VZ18 495 aa13.56□□□□□ -0.24
CACNA1A-220ENST00000635988 DPY19L2P2Q6ZN68 376 aa13.56□□□□□ -0.24
CACNA1A-220ENST00000635988 C17orf107Q6ZR85 190 aa13.56□□□□□ -0.24
CACNA1A-220ENST00000635988 MUC20Q8N307 709 aaPredicted RBP13.56□□□□□ -0.24
CACNA1A-220ENST00000635988 CAMKVQ8NCB2 501 aa13.56□□□□□ -0.24
CACNA1A-220ENST00000635988 NT5CQ8TCD5 201 aa13.56□□□□□ -0.24
CACNA1A-220ENST00000635988 LRRC46Q96FV0 321 aa13.56□□□□□ -0.24
CACNA1A-220ENST00000635988 DMRTA2Q96SC8 542 aa13.56□□□□□ -0.24
CACNA1A-220ENST00000635988 FLRT3Q9NZU0 649 aa13.56□□□□□ -0.24
CACNA1A-220ENST00000635988 ENTPD2Q9Y5L3 495 aa13.56□□□□□ -0.24
CACNA1A-220ENST00000635988 PRRC2BQ5JSZ5 2229 aaKnown RBP13.56□□□□□ -0.24
CACNA1A-220ENST00000635988 SLC35G6P0C7Q6 338 aa13.56□□□□□ -0.24
CACNA1A-220ENST00000635988 PEBP1P30086 187 aaKnown RBP13.56□□□□□ -0.24
CACNA1A-220ENST00000635988 OC90Q02509 493 aaPredicted RBP13.56□□□□□ -0.24
CACNA1A-220ENST00000635988 LTBQ06643 244 aa13.56□□□□□ -0.24
CACNA1A-220ENST00000635988 ISXQ2M1V0 245 aa13.56□□□□□ -0.24
CACNA1A-220ENST00000635988 ALG10BQ5I7T1 473 aa13.56□□□□□ -0.24
CACNA1A-220ENST00000635988 PABPC1L2AQ5JQF8 200 aa13.56□□□□□ -0.24
CACNA1A-220ENST00000635988 ATRAIDQ6UW56 229 aa13.56□□□□□ -0.24
CACNA1A-220ENST00000635988 FAM220AQ7Z4H9 259 aa13.56□□□□□ -0.24
CACNA1A-220ENST00000635988 CCDC36Q8IYA8 594 aa13.56□□□□□ -0.24
CACNA1A-220ENST00000635988 CCDC107Q8WV48 283 aa13.56□□□□□ -0.24
CACNA1A-220ENST00000635988 RGP1Q92546 391 aaPredicted RBP13.56□□□□□ -0.24
CACNA1A-220ENST00000635988 CCDC86Q9H6F5 360 aaKnown RBP13.56□□□□□ -0.24
CACNA1A-220ENST00000635988 FBXO34Q9NWN3 711 aa13.56□□□□□ -0.24
CACNA1A-220ENST00000635988 HPF1Q9NWY4 346 aa13.56□□□□□ -0.24
CACNA1A-220ENST00000635988 SPHK1Q9NYA1 384 aa13.56□□□□□ -0.24
CACNA1A-220ENST00000635988 RASL12Q9NYN1 266 aa13.56□□□□□ -0.24
CACNA1A-220ENST00000635988 H3BUI4 141 aa13.55□□□□□ -0.24
CACNA1A-220ENST00000635988 B3GALT2O43825 422 aa13.55□□□□□ -0.24
CACNA1A-220ENST00000635988 RLN2P04090 185 aa13.55□□□□□ -0.24
CACNA1A-220ENST00000635988 AKAIN1P0CW23 69 aa13.55□□□□□ -0.24
CACNA1A-220ENST00000635988 SPI1P17947 270 aa13.55□□□□□ -0.24
CACNA1A-220ENST00000635988 NANOS3P60323 173 aaKnown RBP13.55□□□□□ -0.24
CACNA1A-220ENST00000635988 RPS15P62841 145 aaKnown RBP13.55□□□□□ -0.24
CACNA1A-220ENST00000635988 C2orf68Q2NKX9 166 aa13.55□□□□□ -0.24
CACNA1A-220ENST00000635988 PDSS1Q5T2R2 415 aa13.55□□□□□ -0.24
CACNA1A-220ENST00000635988 FIGNL1Q6PIW4 674 aa13.55□□□□□ -0.24
CACNA1A-220ENST00000635988 VN1R4Q7Z5H5 301 aa13.55□□□□□ -0.24
CACNA1A-220ENST00000635988 ZNF227Q86WZ6 799 aa13.55□□□□□ -0.24
CACNA1A-220ENST00000635988 OR4N5Q8IXE1 308 aa13.55□□□□□ -0.24
CACNA1A-220ENST00000635988 OR10K1Q8NGX5 313 aa13.55□□□□□ -0.24
CACNA1A-220ENST00000635988 LILRB1Q8NHL6 650 aaPredicted RBP13.55□□□□□ -0.24
CACNA1A-220ENST00000635988 SYNPO2LQ9H987 977 aa13.55□□□□□ -0.24
CACNA1A-220ENST00000635988 MKKSQ9NPJ1 570 aaPredicted RBP13.55□□□□□ -0.24
CACNA1A-220ENST00000635988 PHPT1Q9NRX4 125 aaPredicted RBP13.55□□□□□ -0.24
CACNA1A-220ENST00000635988 UPB1Q9UBR1 384 aa13.55□□□□□ -0.24
CACNA1A-220ENST00000635988 ATPIF1Q9UII2 106 aa13.55□□□□□ -0.24
CACNA1A-220ENST00000635988 KCNK6Q9Y257 313 aa13.55□□□□□ -0.24
CACNA1A-220ENST00000635988 SLC6A5Q9Y345 797 aa13.55□□□□□ -0.24
CACNA1A-220ENST00000635988 TEX46H3BTG2 121 aa13.55□□□□□ -0.24
CACNA1A-220ENST00000635988 ARPC3O15145 178 aa13.55□□□□□ -0.24
CACNA1A-220ENST00000635988 ZNF432O94892 652 aa13.55□□□□□ -0.24
CACNA1A-220ENST00000635988 PLATP00750 562 aa13.55□□□□□ -0.24
CACNA1A-220ENST00000635988 RPL4P36578 427 aaKnown RBP13.55□□□□□ -0.24
CACNA1A-220ENST00000635988 B2MP61769 119 aa13.55□□□□□ -0.24
CACNA1A-220ENST00000635988 SORDQ00796 357 aa13.55□□□□□ -0.24
CACNA1A-220ENST00000635988 DEFA5Q01523 94 aa13.55□□□□□ -0.24
CACNA1A-220ENST00000635988 SSBP1Q04837 148 aaKnown RBP13.55□□□□□ -0.24
CACNA1A-220ENST00000635988 FGL1Q08830 312 aa13.55□□□□□ -0.24
CACNA1A-220ENST00000635988 PAQR7Q86WK9 346 aa13.55□□□□□ -0.24
CACNA1A-220ENST00000635988 NPEPL1Q8NDH3 523 aa13.55□□□□□ -0.24
CACNA1A-220ENST00000635988 OR6K6Q8NGW6 343 aa13.55□□□□□ -0.24
CACNA1A-220ENST00000635988 ST8SIA2Q92186 375 aa13.55□□□□□ -0.24
CACNA1A-220ENST00000635988 NMNAT2Q9BZQ4 307 aa13.55□□□□□ -0.24
CACNA1A-220ENST00000635988 APMAPQ9HDC9 416 aa13.55□□□□□ -0.24
CACNA1A-220ENST00000635988 TAS2R3Q9NYW6 316 aa13.55□□□□□ -0.24
CACNA1A-220ENST00000635988 PURGQ9UJV8 347 aaKnown RBP13.55□□□□□ -0.24
CACNA1A-220ENST00000635988 HCFC2Q9Y5Z7 792 aa13.55□□□□□ -0.24
CACNA1A-220ENST00000635988 ABHD14A-ACY1A0A1B0GW23 586 aa13.54□□□□□ -0.24
CACNA1A-220ENST00000635988 URADA6NGE7 173 aa13.54□□□□□ -0.24
CACNA1A-220ENST00000635988 SIGLEC6O43699 453 aa13.54□□□□□ -0.24
CACNA1A-220ENST00000635988 GLCEO94923 617 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms