RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 PRICKLE2Q7Z3G6 844 aa11.33□□□□□ -0.6
SYNGAP1-207ENST00000628646 LYSMD2Q8IV50 215 aa11.33□□□□□ -0.6
SYNGAP1-207ENST00000628646 UBE2J2Q8N2K1 259 aa11.33□□□□□ -0.6
SYNGAP1-207ENST00000628646 KCTD7Q96MP8 289 aa11.33□□□□□ -0.6
SYNGAP1-207ENST00000628646 ABCB10Q9NRK6 738 aa11.33□□□□□ -0.6
SYNGAP1-207ENST00000628646 MED17Q9NVC6 651 aa11.33□□□□□ -0.6
SYNGAP1-207ENST00000628646 TESQ9UGI8 421 aaKnown RBP11.33□□□□□ -0.6
SYNGAP1-207ENST00000628646 CLEC2DQ9UHP7 191 aa11.33□□□□□ -0.6
SYNGAP1-207ENST00000628646 WIF1Q9Y5W5 379 aa11.33□□□□□ -0.6
SYNGAP1-207ENST00000628646 GJE1A6NN92 205 aa11.32□□□□□ -0.6
SYNGAP1-207ENST00000628646 EIF4E2O60573 245 aaKnown RBP11.32□□□□□ -0.6
SYNGAP1-207ENST00000628646 GPX5O75715 221 aa11.32□□□□□ -0.6
SYNGAP1-207ENST00000628646 MYL9P24844 172 aa11.32□□□□□ -0.6
SYNGAP1-207ENST00000628646 MSX1P28360 303 aa11.32□□□□□ -0.6
SYNGAP1-207ENST00000628646 DUSP8Q13202 625 aa11.32□□□□□ -0.6
SYNGAP1-207ENST00000628646 CRTC2Q53ET0 693 aaPredicted RBP11.32□□□□□ -0.6
SYNGAP1-207ENST00000628646 SLC25A30Q5SVS4 291 aa11.32□□□□□ -0.6
SYNGAP1-207ENST00000628646 PLEKHG7Q6ZR37 379 aa11.32□□□□□ -0.6
SYNGAP1-207ENST00000628646 MDGA2Q7Z553 956 aa11.32□□□□□ -0.6
SYNGAP1-207ENST00000628646 OAFQ86UD1 273 aa11.32□□□□□ -0.6
SYNGAP1-207ENST00000628646 MEX3DQ86XN8 651 aaKnown RBP11.32□□□□□ -0.6
SYNGAP1-207ENST00000628646 KIF18BQ86Y91 864 aa11.32□□□□□ -0.6
SYNGAP1-207ENST00000628646 NRMQ8IXM6 262 aa11.32□□□□□ -0.6
SYNGAP1-207ENST00000628646 C19orf18Q8NEA5 215 aa11.32□□□□□ -0.6
SYNGAP1-207ENST00000628646 DAPL1A0PJW8 107 aa11.32□□□□□ -0.6
SYNGAP1-207ENST00000628646 NPIPA2E9PIF3 369 aa11.32□□□□□ -0.6
SYNGAP1-207ENST00000628646 NPIPA3F8WFD2 350 aa11.32□□□□□ -0.6
SYNGAP1-207ENST00000628646 CASKO14936 926 aa11.32□□□□□ -0.6
SYNGAP1-207ENST00000628646 DXOO77932 396 aaKnown RBP11.32□□□□□ -0.6
SYNGAP1-207ENST00000628646 MTNR1AP48039 350 aa11.32□□□□□ -0.6
SYNGAP1-207ENST00000628646 CTBP2P56545 445 aa11.32□□□□□ -0.6
SYNGAP1-207ENST00000628646 DND1Q8IYX4 353 aaKnown RBP11.32□□□□□ -0.6
SYNGAP1-207ENST00000628646 POC5Q8NA72 575 aa11.32□□□□□ -0.6
SYNGAP1-207ENST00000628646 OR5W2Q8NH69 310 aa11.32□□□□□ -0.6
SYNGAP1-207ENST00000628646 RNFT2Q96EX2 444 aa11.32□□□□□ -0.6
SYNGAP1-207ENST00000628646 IMMP1LQ96LU5 166 aa11.32□□□□□ -0.6
SYNGAP1-207ENST00000628646 PIGQQ9BRB3 760 aa11.32□□□□□ -0.6
SYNGAP1-207ENST00000628646 INIPQ9NRY2 104 aa11.32□□□□□ -0.6
SYNGAP1-207ENST00000628646 CDH10Q9Y6N8 788 aa11.32□□□□□ -0.6
SYNGAP1-207ENST00000628646 RNF13O43567 381 aa11.32□□□□□ -0.6
SYNGAP1-207ENST00000628646 HLA-DPB1P04440 258 aa11.32□□□□□ -0.6
SYNGAP1-207ENST00000628646 GPR4P46093 362 aa11.32□□□□□ -0.6
SYNGAP1-207ENST00000628646 GCGRP47871 477 aa11.32□□□□□ -0.6
SYNGAP1-207ENST00000628646 MFAP5Q13361 173 aa11.32□□□□□ -0.6
SYNGAP1-207ENST00000628646 LSRQ86X29 649 aaPredicted RBP11.32□□□□□ -0.6
SYNGAP1-207ENST00000628646 PROKR2Q8NFJ6 384 aa11.32□□□□□ -0.6
SYNGAP1-207ENST00000628646 FANK1Q8TC84 345 aa11.32□□□□□ -0.6
SYNGAP1-207ENST00000628646 A0A1B0GWA3 101 aa11.32□□□□□ -0.6
SYNGAP1-207ENST00000628646 NTN1O95631 604 aa11.32□□□□□ -0.6
SYNGAP1-207ENST00000628646 IGKV3-11P04433 115 aa11.32□□□□□ -0.6
SYNGAP1-207ENST00000628646 PNMTP11086 282 aa11.32□□□□□ -0.6
SYNGAP1-207ENST00000628646 SLC9A3P48764 834 aa11.32□□□□□ -0.6
SYNGAP1-207ENST00000628646 SOX8P57073 446 aa11.32□□□□□ -0.6
SYNGAP1-207ENST00000628646 ZNF45Q02386 682 aa11.32□□□□□ -0.6
SYNGAP1-207ENST00000628646 OR7A5Q15622 319 aa11.32□□□□□ -0.6
SYNGAP1-207ENST00000628646 CMIPQ8IY22 773 aa11.32□□□□□ -0.6
SYNGAP1-207ENST00000628646 CTHRC1Q96CG8 243 aa11.32□□□□□ -0.6
SYNGAP1-207ENST00000628646 SGTBQ96EQ0 304 aa11.32□□□□□ -0.6
SYNGAP1-207ENST00000628646 FAM46AQ96IP4 442 aaKnown RBP11.32□□□□□ -0.6
SYNGAP1-207ENST00000628646 WDR77Q9BQA1 342 aaPredicted RBP11.32□□□□□ -0.6
SYNGAP1-207ENST00000628646 BARHL1Q9BZE3 327 aa11.32□□□□□ -0.6
SYNGAP1-207ENST00000628646 SAP130Q9H0E3 1048 aa11.32□□□□□ -0.6
SYNGAP1-207ENST00000628646 ZFP64Q9NPA5 681 aa11.32□□□□□ -0.6
SYNGAP1-207ENST00000628646 UPK1BO75841 260 aa11.31□□□□□ -0.6
SYNGAP1-207ENST00000628646 TBXA2RP21731 343 aa11.31□□□□□ -0.6
SYNGAP1-207ENST00000628646 CDK5Q00535 292 aa11.31□□□□□ -0.6
SYNGAP1-207ENST00000628646 MGAT2Q10469 447 aa11.31□□□□□ -0.6
SYNGAP1-207ENST00000628646 RAB40BQ12829 278 aa11.31□□□□□ -0.6
SYNGAP1-207ENST00000628646 MAPK14Q16539 360 aa11.31□□□□□ -0.6
SYNGAP1-207ENST00000628646 OCLNQ16625 522 aa11.31□□□□□ -0.6
SYNGAP1-207ENST00000628646 C1orf94Q6P1W5 598 aa11.31□□□□□ -0.6
SYNGAP1-207ENST00000628646 CISD2Q8N5K1 135 aaKnown RBP11.31□□□□□ -0.6
SYNGAP1-207ENST00000628646 TMEM239Q8WW34 195 aa11.31□□□□□ -0.6
SYNGAP1-207ENST00000628646 OR51V1Q9H2C8 321 aa11.31□□□□□ -0.6
SYNGAP1-207ENST00000628646 POLE4Q9NR33 117 aa11.31□□□□□ -0.6
SYNGAP1-207ENST00000628646 NTNG1Q9Y2I2 539 aa11.31□□□□□ -0.6
SYNGAP1-207ENST00000628646 UGT2A1Q9Y4X1 527 aa11.31□□□□□ -0.6
SYNGAP1-207ENST00000628646 KIAA0513O60268 411 aa11.31□□□□□ -0.6
SYNGAP1-207ENST00000628646 CBR3O75828 277 aa11.31□□□□□ -0.6
SYNGAP1-207ENST00000628646 THY1P04216 161 aa11.31□□□□□ -0.6
SYNGAP1-207ENST00000628646 SCG5P05408 212 aa11.31□□□□□ -0.6
SYNGAP1-207ENST00000628646 SDC2P34741 201 aa11.31□□□□□ -0.6
SYNGAP1-207ENST00000628646 HTR3AP46098 478 aa11.31□□□□□ -0.6
SYNGAP1-207ENST00000628646 WIPI1Q5MNZ9 446 aaPredicted RBP11.31□□□□□ -0.6
SYNGAP1-207ENST00000628646 ZNF585AQ6P3V2 769 aa11.31□□□□□ -0.6
SYNGAP1-207ENST00000628646 JAZF1Q86VZ6 243 aa11.31□□□□□ -0.6
SYNGAP1-207ENST00000628646 ANKK1Q8NFD2 765 aa11.31□□□□□ -0.6
SYNGAP1-207ENST00000628646 ABHD17AQ96GS6 310 aa11.31□□□□□ -0.6
SYNGAP1-207ENST00000628646 SLITRK2Q9H156 845 aa11.31□□□□□ -0.6
SYNGAP1-207ENST00000628646 TMED7-TICAM2A0A0A6YYA0 188 aa11.31□□□□□ -0.6
SYNGAP1-207ENST00000628646 FAM25AB3EWG3 89 aa11.31□□□□□ -0.6
SYNGAP1-207ENST00000628646 FAM25CB3EWG5 89 aa11.31□□□□□ -0.6
SYNGAP1-207ENST00000628646 FAM25GB3EWG6 89 aa11.31□□□□□ -0.6
SYNGAP1-207ENST00000628646 SHISA8B8ZZ34 492 aa11.31□□□□□ -0.6
SYNGAP1-207ENST00000628646 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.31□□□□□ -0.6
SYNGAP1-207ENST00000628646 PRKYO43930 277 aa11.31□□□□□ -0.6
SYNGAP1-207ENST00000628646 EIF1P41567 113 aaKnown RBP11.31□□□□□ -0.6
SYNGAP1-207ENST00000628646 CRYBB2P43320 205 aa11.31□□□□□ -0.6
SYNGAP1-207ENST00000628646 TAS2R43P59537 309 aa11.31□□□□□ -0.6
SYNGAP1-207ENST00000628646 TRIQKQ629K1 86 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms