RNA–Protein interactions for RNA: ENST00000622972.3

LINC00963-215, long intergenic non-protein coding RNA 963, human

TSL 5

Gene LINC00963, Length 444 nt, Biotype lincRNA, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00963-215	ENST00000622972	NPIPB7	O75200	414 aa		5.21	□□□□□ -1.58
LINC00963-215	ENST00000622972	PRKD3	O94806	890 aa		5.21	□□□□□ -1.58
LINC00963-215	ENST00000622972	DIRAS1	O95057	198 aa		5.21	□□□□□ -1.58
LINC00963-215	ENST00000622972	SERPINA1	P01009	418 aa		5.21	□□□□□ -1.58
LINC00963-215	ENST00000622972	MT-ND1	P03886	318 aa		5.21	□□□□□ -1.58
LINC00963-215	ENST00000622972	CD8B	P10966	210 aa		5.21	□□□□□ -1.58
LINC00963-215	ENST00000622972	IL7R	P16871	459 aa		5.21	□□□□□ -1.58
LINC00963-215	ENST00000622972	ZNF17	P17021	662 aa		5.21	□□□□□ -1.58
LINC00963-215	ENST00000622972	TACR3	P29371	465 aa		5.21	□□□□□ -1.58
LINC00963-215	ENST00000622972	YAP1	P46937	504 aa	Known RBP	5.21	□□□□□ -1.58
LINC00963-215	ENST00000622972	IDH2	P48735	452 aa	Known RBP	5.21	□□□□□ -1.58
LINC00963-215	ENST00000622972	ANXA11	P50995	505 aa	Known RBP	5.21	□□□□□ -1.58
LINC00963-215	ENST00000622972	P2RY4	P51582	365 aa		5.21	□□□□□ -1.58
LINC00963-215	ENST00000622972	CDH12	P55289	794 aa		5.21	□□□□□ -1.58
LINC00963-215	ENST00000622972	SUMO3	P55854	103 aa	Predicted RBP	5.21	□□□□□ -1.58
LINC00963-215	ENST00000622972	CARD18	P57730	90 aa		5.21	□□□□□ -1.58
LINC00963-215	ENST00000622972	HPCA	P84074	193 aa		5.21	□□□□□ -1.58
LINC00963-215	ENST00000622972	BEX5	Q5H9J7	111 aa		5.21	□□□□□ -1.58
LINC00963-215	ENST00000622972	GLYAT	Q6IB77	296 aa		5.21	□□□□□ -1.58
LINC00963-215	ENST00000622972	LCN8	Q6JVE9	175 aa		5.21	□□□□□ -1.58
LINC00963-215	ENST00000622972	ERICH5	Q6P6B1	374 aa		5.21	□□□□□ -1.58
LINC00963-215	ENST00000622972	CYP2R1	Q6VVX0	501 aa		5.21	□□□□□ -1.58
LINC00963-215	ENST00000622972	ESPNL	Q6ZVH7	1005 aa		5.21	□□□□□ -1.58
LINC00963-215	ENST00000622972	YTHDF3	Q7Z739	585 aa	Known RBP	5.21	□□□□□ -1.58
LINC00963-215	ENST00000622972	PATL1	Q86TB9	770 aa	Known RBP	5.21	□□□□□ -1.58
LINC00963-215	ENST00000622972	CARM1	Q86X55	608 aa		5.21	□□□□□ -1.58
LINC00963-215	ENST00000622972	MEX3D	Q86XN8	651 aa	Known RBP	5.21	□□□□□ -1.58
LINC00963-215	ENST00000622972	MISP	Q8IVT2	679 aa		5.21	□□□□□ -1.58
LINC00963-215	ENST00000622972	CMIP	Q8IY22	773 aa		5.21	□□□□□ -1.58
LINC00963-215	ENST00000622972	PEX5L	Q8IYB4	626 aa		5.21	□□□□□ -1.58
LINC00963-215	ENST00000622972	LILRA2	Q8N149	483 aa		5.21	□□□□□ -1.58
LINC00963-215	ENST00000622972	TOR1AIP2	Q8NFQ8	470 aa		5.21	□□□□□ -1.58
LINC00963-215	ENST00000622972	OR6K3	Q8NGY3	331 aa		5.21	□□□□□ -1.58
LINC00963-215	ENST00000622972	OR2V1	Q8NHB1	315 aa		5.21	□□□□□ -1.58
LINC00963-215	ENST00000622972	TMEM171	Q8WVE6	324 aa		5.21	□□□□□ -1.58
LINC00963-215	ENST00000622972	OIT3	Q8WWZ8	545 aa		5.21	□□□□□ -1.58
LINC00963-215	ENST00000622972	ROBO4	Q8WZ75	1007 aa		5.21	□□□□□ -1.58
LINC00963-215	ENST00000622972	PMM1	Q92871	262 aa		5.21	□□□□□ -1.58
LINC00963-215	ENST00000622972	OSTF1	Q92882	214 aa		5.21	□□□□□ -1.58
LINC00963-215	ENST00000622972	ZBTB8A	Q96BR9	441 aa		5.21	□□□□□ -1.58
LINC00963-215	ENST00000622972	CCDC124	Q96CT7	223 aa	Known RBP	5.21	□□□□□ -1.58
LINC00963-215	ENST00000622972	GMPPA	Q96IJ6	420 aa	Predicted RBP	5.21	□□□□□ -1.58
LINC00963-215	ENST00000622972	KLHL15	Q96M94	604 aa		5.21	□□□□□ -1.58
LINC00963-215	ENST00000622972	KCTD14	Q9BQ13	255 aa	Predicted RBP	5.21	□□□□□ -1.58
LINC00963-215	ENST00000622972	TACO1	Q9BSH4	297 aa	Known RBP	5.21	□□□□□ -1.58
LINC00963-215	ENST00000622972	THTPA	Q9BU02	230 aa		5.21	□□□□□ -1.58
LINC00963-215	ENST00000622972	BDH2	Q9BUT1	245 aa		5.21	□□□□□ -1.58
LINC00963-215	ENST00000622972	ZNF426	Q9BUY5	554 aa		5.21	□□□□□ -1.58
LINC00963-215	ENST00000622972	C1orf21	Q9H246	121 aa		5.21	□□□□□ -1.58
LINC00963-215	ENST00000622972	LRMDA	Q9H2I8	198 aa		5.21	□□□□□ -1.58
LINC00963-215	ENST00000622972	TIGAR	Q9NQ88	270 aa		5.21	□□□□□ -1.58
LINC00963-215	ENST00000622972	DCAF13	Q9NV06	445 aa	Known RBP	5.21	□□□□□ -1.58
LINC00963-215	ENST00000622972	THUMPD1	Q9NXG2	353 aa	Known RBP	5.21	□□□□□ -1.58
LINC00963-215	ENST00000622972	CALML5	Q9NZT1	146 aa		5.21	□□□□□ -1.58
LINC00963-215	ENST00000622972	SLC35A3	Q9Y2D2	325 aa		5.21	□□□□□ -1.58
LINC00963-215	ENST00000622972	HIVEP1	P15822	2718 aa		5.21	□□□□□ -1.58
LINC00963-215	ENST00000622972	TMED7-TICAM2	A0A0A6YYA0	188 aa		5.2	□□□□□ -1.58
LINC00963-215	ENST00000622972	IGHV3-15	A0A0B4J1V0	119 aa		5.2	□□□□□ -1.58
LINC00963-215	ENST00000622972	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	5.2	□□□□□ -1.58
LINC00963-215	ENST00000622972	SLC22A31	A6NKX4	558 aa		5.2	□□□□□ -1.58
LINC00963-215	ENST00000622972	CPSF4L	A6NMK7	179 aa	Known RBP	5.2	□□□□□ -1.58
LINC00963-215	ENST00000622972	GJE1	A6NN92	205 aa		5.2	□□□□□ -1.58
LINC00963-215	ENST00000622972	DEFB108A	A8MXU0	73 aa		5.2	□□□□□ -1.58
LINC00963-215	ENST00000622972	ANKRD65	E5RJM6	399 aa		5.2	□□□□□ -1.58
LINC00963-215	ENST00000622972	FTCDNL1	E5RQL4	147 aa		5.2	□□□□□ -1.58
LINC00963-215	ENST00000622972		H7C1Q1	480 aa		5.2	□□□□□ -1.58
LINC00963-215	ENST00000622972	SMAD9	O15198	467 aa	Known RBP	5.2	□□□□□ -1.58
LINC00963-215	ENST00000622972	CLOCK	O15516	846 aa		5.2	□□□□□ -1.58
LINC00963-215	ENST00000622972	SOX30	O94993	753 aa		5.2	□□□□□ -1.58
LINC00963-215	ENST00000622972	CGA	P01215	116 aa		5.2	□□□□□ -1.58
LINC00963-215	ENST00000622972	PPP3CB	P16298	524 aa		5.2	□□□□□ -1.58
LINC00963-215	ENST00000622972	ZNF26	P17031	533 aa	Predicted RBP	5.2	□□□□□ -1.58
LINC00963-215	ENST00000622972	FUT1	P19526	365 aa		5.2	□□□□□ -1.58
LINC00963-215	ENST00000622972	CCNA2	P20248	432 aa		5.2	□□□□□ -1.58
LINC00963-215	ENST00000622972	IL32	P24001	234 aa		5.2	□□□□□ -1.58
LINC00963-215	ENST00000622972	PCSK6	P29122	969 aa		5.2	□□□□□ -1.58
LINC00963-215	ENST00000622972	SLC7A1	P30825	629 aa		5.2	□□□□□ -1.58
LINC00963-215	ENST00000622972	CCKAR	P32238	428 aa		5.2	□□□□□ -1.58
LINC00963-215	ENST00000622972	EIF1	P41567	113 aa	Known RBP	5.2	□□□□□ -1.58
LINC00963-215	ENST00000622972	UGT2B15	P54855	530 aa		5.2	□□□□□ -1.58
LINC00963-215	ENST00000622972	NR1H2	P55055	460 aa		5.2	□□□□□ -1.58
LINC00963-215	ENST00000622972	RGS8	P57771	180 aa	Predicted RBP	5.2	□□□□□ -1.58
LINC00963-215	ENST00000622972	SELENOW	P63302	87 aa		5.2	□□□□□ -1.58
LINC00963-215	ENST00000622972	MXRA7	P84157	204 aa		5.2	□□□□□ -1.58
LINC00963-215	ENST00000622972	PPP2R2B	Q00005	443 aa		5.2	□□□□□ -1.58
LINC00963-215	ENST00000622972	MERTK	Q12866	999 aa		5.2	□□□□□ -1.58
LINC00963-215	ENST00000622972	PIN1	Q13526	163 aa	Predicted RBP	5.2	□□□□□ -1.58
LINC00963-215	ENST00000622972	FHL1	Q13642	323 aa		5.2	□□□□□ -1.58
LINC00963-215	ENST00000622972	CBFB	Q13951	182 aa		5.2	□□□□□ -1.58
LINC00963-215	ENST00000622972	CCNI	Q14094	377 aa		5.2	□□□□□ -1.58
LINC00963-215	ENST00000622972	LARS2	Q15031	903 aa	Known RBP	5.2	□□□□□ -1.58
LINC00963-215	ENST00000622972	SEC23B	Q15437	767 aa		5.2	□□□□□ -1.58
LINC00963-215	ENST00000622972	GUSBP1	Q15486	140 aa		5.2	□□□□□ -1.58
LINC00963-215	ENST00000622972	OR1Q1	Q15612	314 aa		5.2	□□□□□ -1.58
LINC00963-215	ENST00000622972	KRTAP21-3	Q3LHN1	58 aa		5.2	□□□□□ -1.58
LINC00963-215	ENST00000622972	TMEM176B	Q3YBM2	270 aa	Predicted RBP	5.2	□□□□□ -1.58
LINC00963-215	ENST00000622972	ENTPD8	Q5MY95	495 aa		5.2	□□□□□ -1.58
LINC00963-215	ENST00000622972	SAMD4B	Q5PRF9	694 aa	Known RBP	5.2	□□□□□ -1.58
LINC00963-215	ENST00000622972	C16orf89	Q6UX73	402 aa		5.2	□□□□□ -1.58
LINC00963-215	ENST00000622972	NHLRC1	Q6VVB1	395 aa		5.2	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms