RNA–Protein interactions for RNA: ENST00000618934.1

PCDHGB3-202, Transcript of protocadherin gamma subfamily B, 3, humanhuman

APPRIS P1 BASIC

Gene PCDHGB3, Length 2,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-202ENST00000618934 KIAA0895LQ68EN5 471 aa17.57■□□□□ 0.4
PCDHGB3-202ENST00000618934 MED25Q71SY5 747 aa17.57■□□□□ 0.4
PCDHGB3-202ENST00000618934 SLC25A38Q96DW6 304 aa17.57■□□□□ 0.4
PCDHGB3-202ENST00000618934 NUBP2Q9Y5Y2 271 aa17.57■□□□□ 0.4
PCDHGB3-202ENST00000618934 GATBO75879 557 aaKnown RBP17.56■□□□□ 0.4
PCDHGB3-202ENST00000618934 CAPZA2P47755 286 aa17.56■□□□□ 0.4
PCDHGB3-202ENST00000618934 RPS15P62841 145 aaKnown RBP17.56■□□□□ 0.4
PCDHGB3-202ENST00000618934 EGR4Q05215 589 aa17.56■□□□□ 0.4
PCDHGB3-202ENST00000618934 DEFB119Q8N690 84 aa17.56■□□□□ 0.4
PCDHGB3-202ENST00000618934 C10orf53Q8N6V4 93 aa17.56■□□□□ 0.4
PCDHGB3-202ENST00000618934 FLVCR2Q9UPI3 526 aa17.56■□□□□ 0.4
PCDHGB3-202ENST00000618934 RP1P56715 2156 aa17.56■□□□□ 0.4
PCDHGB3-202ENST00000618934 A8MUA0 341 aa17.56■□□□□ 0.4
PCDHGB3-202ENST00000618934 H3BSH0 61 aa17.56■□□□□ 0.4
PCDHGB3-202ENST00000618934 TNFRSF10AO00220 468 aa17.56■□□□□ 0.4
PCDHGB3-202ENST00000618934 GMDSO60547 372 aa17.56■□□□□ 0.4
PCDHGB3-202ENST00000618934 PPM1BO75688 479 aa17.56■□□□□ 0.4
PCDHGB3-202ENST00000618934 GLCEO94923 617 aa17.56■□□□□ 0.4
PCDHGB3-202ENST00000618934 OR8G3PP0DMU2 310 aa17.56■□□□□ 0.4
PCDHGB3-202ENST00000618934 STOMP27105 288 aa17.56■□□□□ 0.4
PCDHGB3-202ENST00000618934 GDNFP39905 211 aa17.56■□□□□ 0.4
PCDHGB3-202ENST00000618934 RPS27P42677 84 aaKnown RBP17.56■□□□□ 0.4
PCDHGB3-202ENST00000618934 CCINQ13939 588 aa17.56■□□□□ 0.4
PCDHGB3-202ENST00000618934 GSG1Q2KHT4 349 aa17.56■□□□□ 0.4
PCDHGB3-202ENST00000618934 OTPQ5XKR4 325 aa17.56■□□□□ 0.4
PCDHGB3-202ENST00000618934 FCRLAQ7L513 359 aa17.56■□□□□ 0.4
PCDHGB3-202ENST00000618934 FAM122BQ7Z309 247 aa17.56■□□□□ 0.4
PCDHGB3-202ENST00000618934 HYLS1Q96M11 299 aa17.56■□□□□ 0.4
PCDHGB3-202ENST00000618934 LRFN5Q96NI6 719 aa17.56■□□□□ 0.4
PCDHGB3-202ENST00000618934 RTN4RQ9BZR6 473 aa17.56■□□□□ 0.4
PCDHGB3-202ENST00000618934 SPRTNQ9H040 489 aaPredicted RBP17.56■□□□□ 0.4
PCDHGB3-202ENST00000618934 SRA1Q9HD15 236 aaKnown RBP17.56■□□□□ 0.4
PCDHGB3-202ENST00000618934 TMEM72A0PK05 275 aa17.55■□□□□ 0.4
PCDHGB3-202ENST00000618934 ELOA3DA6NLF2 546 aaPredicted RBP17.55■□□□□ 0.4
PCDHGB3-202ENST00000618934 ZNF879B4DU55 563 aa17.55■□□□□ 0.4
PCDHGB3-202ENST00000618934 WISP1O95388 367 aa17.55■□□□□ 0.4
PCDHGB3-202ENST00000618934 GFERP55789 205 aa17.55■□□□□ 0.4
PCDHGB3-202ENST00000618934 ELOA3BQ3SY89 546 aa17.55■□□□□ 0.4
PCDHGB3-202ENST00000618934 FNDC7Q5VTL7 733 aa17.55■□□□□ 0.4
PCDHGB3-202ENST00000618934 ATG4DQ86TL0 474 aaPredicted RBP17.55■□□□□ 0.4
PCDHGB3-202ENST00000618934 CMIPQ8IY22 773 aa17.55■□□□□ 0.4
PCDHGB3-202ENST00000618934 EXD3Q8N9H8 876 aa17.55■□□□□ 0.4
PCDHGB3-202ENST00000618934 LRRC75AQ8NAA5 344 aa17.55■□□□□ 0.4
PCDHGB3-202ENST00000618934 ELOA3Q8NG57 546 aa17.55■□□□□ 0.4
PCDHGB3-202ENST00000618934 RPS4Y2Q8TD47 263 aa17.55■□□□□ 0.4
PCDHGB3-202ENST00000618934 MAP6Q96JE9 813 aa17.55■□□□□ 0.4
PCDHGB3-202ENST00000618934 TRAF4Q9BUZ4 470 aaPredicted RBP17.55■□□□□ 0.4
PCDHGB3-202ENST00000618934 IRF2BPLQ9H1B7 796 aa17.55■□□□□ 0.4
PCDHGB3-202ENST00000618934 GPR27Q9NS67 375 aa17.55■□□□□ 0.4
PCDHGB3-202ENST00000618934 MGAT4AQ9UM21 535 aa17.55■□□□□ 0.4
PCDHGB3-202ENST00000618934 MRPS33Q9Y291 106 aaKnown RBP17.55■□□□□ 0.4
PCDHGB3-202ENST00000618934 TVP23AA6NH52 213 aa17.55■□□□□ 0.4
PCDHGB3-202ENST00000618934 IFITM5A6NNB3 132 aa17.55■□□□□ 0.4
PCDHGB3-202ENST00000618934 CLDN4O14493 209 aa17.55■□□□□ 0.4
PCDHGB3-202ENST00000618934 GPANK1O95872 356 aa17.55■□□□□ 0.4
PCDHGB3-202ENST00000618934 HPXP02790 462 aa17.55■□□□□ 0.4
PCDHGB3-202ENST00000618934 DPP4P27487 766 aa17.55■□□□□ 0.4
PCDHGB3-202ENST00000618934 GABRA4P48169 554 aa17.55■□□□□ 0.4
PCDHGB3-202ENST00000618934 GNG2P59768 71 aa17.55■□□□□ 0.4
PCDHGB3-202ENST00000618934 SNTB2Q13425 540 aaKnown RBP17.55■□□□□ 0.4
PCDHGB3-202ENST00000618934 ZNF74Q16587 644 aa17.55■□□□□ 0.4
PCDHGB3-202ENST00000618934 SFRP4Q6FHJ7 346 aaPredicted RBP17.55■□□□□ 0.4
PCDHGB3-202ENST00000618934 PHOSPHO1Q8TCT1 267 aa17.55■□□□□ 0.4
PCDHGB3-202ENST00000618934 SMIM4Q8WVI0 70 aa17.55■□□□□ 0.4
PCDHGB3-202ENST00000618934 CITED4Q96RK1 184 aa17.55■□□□□ 0.4
PCDHGB3-202ENST00000618934 NKIRAS2Q9NYR9 191 aa17.55■□□□□ 0.4
PCDHGB3-202ENST00000618934 TEKT2Q9UIF3 430 aa17.55■□□□□ 0.4
PCDHGB3-202ENST00000618934 TMA7Q9Y2S6 64 aaKnown RBP17.55■□□□□ 0.4
PCDHGB3-202ENST00000618934 ZNF281Q9Y2X9 895 aa17.55■□□□□ 0.4
PCDHGB3-202ENST00000618934 ZNF593O00488 134 aaPredicted RBP17.54■□□□□ 0.4
PCDHGB3-202ENST00000618934 SRPX2O60687 465 aaPredicted RBP17.54■□□□□ 0.4
PCDHGB3-202ENST00000618934 NSA2O95478 260 aaKnown RBP17.54■□□□□ 0.4
PCDHGB3-202ENST00000618934 H2AFB2P0C5Z0 115 aa17.54■□□□□ 0.4
PCDHGB3-202ENST00000618934 CTXN1P60606 82 aa17.54■□□□□ 0.4
PCDHGB3-202ENST00000618934 PITPNAQ00169 270 aa17.54■□□□□ 0.4
PCDHGB3-202ENST00000618934 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.54■□□□□ 0.4
PCDHGB3-202ENST00000618934 UBE2NLQ5JXB2 153 aa17.54■□□□□ 0.4
PCDHGB3-202ENST00000618934 SLC35D3Q5M8T2 416 aa17.54■□□□□ 0.4
PCDHGB3-202ENST00000618934 HACD4Q5VWC8 232 aa17.54■□□□□ 0.4
PCDHGB3-202ENST00000618934 LINGO2Q7L985 606 aa17.54■□□□□ 0.4
PCDHGB3-202ENST00000618934 PRR22Q8IZ63 422 aa17.54■□□□□ 0.4
PCDHGB3-202ENST00000618934 LSM14AQ8ND56 463 aaKnown RBP17.54■□□□□ 0.4
PCDHGB3-202ENST00000618934 OR52I2Q8NH67 350 aa17.54■□□□□ 0.4
PCDHGB3-202ENST00000618934 GIMAP1Q8WWP7 306 aa17.54■□□□□ 0.4
PCDHGB3-202ENST00000618934 ELF4Q99607 663 aaPredicted RBP17.54■□□□□ 0.4
PCDHGB3-202ENST00000618934 MFRPQ9BY79 579 aa17.54■□□□□ 0.4
PCDHGB3-202ENST00000618934 MRM2Q9UI43 246 aaKnown RBP17.54■□□□□ 0.4
PCDHGB3-202ENST00000618934 IGHV5-51A0A0C4DH38 117 aa17.53■□□□□ 0.4
PCDHGB3-202ENST00000618934 CHURC1-FNTBB4DL54 471 aa17.53■□□□□ 0.4
PCDHGB3-202ENST00000618934 CD1AP06126 327 aa17.53■□□□□ 0.4
PCDHGB3-202ENST00000618934 FNTBP49356 437 aa17.53■□□□□ 0.4
PCDHGB3-202ENST00000618934 PSMD4P55036 377 aaKnown RBP17.53■□□□□ 0.4
PCDHGB3-202ENST00000618934 SKP2Q13309 424 aa17.53■□□□□ 0.4
PCDHGB3-202ENST00000618934 CREB3L2Q70SY1 520 aa17.53■□□□□ 0.4
PCDHGB3-202ENST00000618934 FAM71CQ8NEG0 241 aa17.53■□□□□ 0.4
PCDHGB3-202ENST00000618934 ADAMTS14Q8WXS8 1223 aa17.53■□□□□ 0.4
PCDHGB3-202ENST00000618934 KTI12Q96EK9 354 aaPredicted RBP17.53■□□□□ 0.4
PCDHGB3-202ENST00000618934 NXF5Q9H1B4 397 aaKnown RBP17.53■□□□□ 0.4
PCDHGB3-202ENST00000618934 RXFP3Q9NSD7 469 aa17.53■□□□□ 0.4
PCDHGB3-202ENST00000618934 MSRAQ9UJ68 235 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms