RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 LRRC36Q1X8D7 754 aa13.13□□□□□ -0.31
CD48-203ENST00000613788 MS4A18Q3C1V0 323 aa13.13□□□□□ -0.31
CD48-203ENST00000613788 C1orf185Q5T7R7 199 aa13.13□□□□□ -0.31
CD48-203ENST00000613788 OGFRL1Q5TC84 451 aaPredicted RBP13.13□□□□□ -0.31
CD48-203ENST00000613788 LPCAT4Q643R3 524 aa13.13□□□□□ -0.31
CD48-203ENST00000613788 SMARCD3Q6STE5 483 aa13.13□□□□□ -0.31
CD48-203ENST00000613788 RPTNQ6XPR3 784 aa13.13□□□□□ -0.31
CD48-203ENST00000613788 CCDC103Q8IW40 242 aa13.13□□□□□ -0.31
CD48-203ENST00000613788 MCEMP1Q8IX19 187 aa13.13□□□□□ -0.31
CD48-203ENST00000613788 CLDN22Q8N7P3 220 aa13.13□□□□□ -0.31
CD48-203ENST00000613788 OXGR1Q96P68 337 aa13.13□□□□□ -0.31
CD48-203ENST00000613788 SF3B5Q9BWJ5 86 aaKnown RBP13.13□□□□□ -0.31
CD48-203ENST00000613788 TAS2R5Q9NYW4 299 aa13.13□□□□□ -0.31
CD48-203ENST00000613788 USE1Q9NZ43 259 aa13.13□□□□□ -0.31
CD48-203ENST00000613788 CLCF1Q9UBD9 225 aa13.13□□□□□ -0.31
CD48-203ENST00000613788 SEC14L4Q9UDX3 406 aa13.13□□□□□ -0.31
CD48-203ENST00000613788 ORC6Q9Y5N6 252 aa13.13□□□□□ -0.31
CD48-203ENST00000613788 KMT2BQ9UMN6 2715 aaPredicted RBP13.13□□□□□ -0.31
CD48-203ENST00000613788 TRAV27A0A087WT01 109 aa13.13□□□□□ -0.31
CD48-203ENST00000613788 SOCS2O14508 198 aa13.13□□□□□ -0.31
CD48-203ENST00000613788 RNF13O43567 381 aa13.13□□□□□ -0.31
CD48-203ENST00000613788 NDUFB2O95178 105 aa13.13□□□□□ -0.31
CD48-203ENST00000613788 HPRP00739 348 aa13.13□□□□□ -0.31
CD48-203ENST00000613788 ALPLP05186 524 aa13.13□□□□□ -0.31
CD48-203ENST00000613788 OSMP13725 252 aa13.13□□□□□ -0.31
CD48-203ENST00000613788 IGFBP5P24593 272 aa13.13□□□□□ -0.31
CD48-203ENST00000613788 PEX2P28328 305 aa13.13□□□□□ -0.31
CD48-203ENST00000613788 UQCRC1P31930 480 aa13.13□□□□□ -0.31
CD48-203ENST00000613788 AQP2P41181 271 aa13.13□□□□□ -0.31
CD48-203ENST00000613788 P2RY4P51582 365 aa13.13□□□□□ -0.31
CD48-203ENST00000613788 RPL18Q07020 188 aaKnown RBP13.13□□□□□ -0.31
CD48-203ENST00000613788 RASGEF1BQ0VAM2 473 aa13.13□□□□□ -0.31
CD48-203ENST00000613788 PDK3Q15120 406 aa13.13□□□□□ -0.31
CD48-203ENST00000613788 RFX4Q33E94 735 aa13.13□□□□□ -0.31
CD48-203ENST00000613788 ALG10Q5BKT4 473 aa13.13□□□□□ -0.31
CD48-203ENST00000613788 KLHL17Q6TDP4 642 aa13.13□□□□□ -0.31
CD48-203ENST00000613788 B3GNT6Q6ZMB0 384 aa13.13□□□□□ -0.31
CD48-203ENST00000613788 PXKQ7Z7A4 578 aa13.13□□□□□ -0.31
CD48-203ENST00000613788 GPAT4Q86UL3 456 aa13.13□□□□□ -0.31
CD48-203ENST00000613788 ATCAYQ86WG3 371 aa13.13□□□□□ -0.31
CD48-203ENST00000613788 PARP8Q8N3A8 854 aa13.13□□□□□ -0.31
CD48-203ENST00000613788 PACRGLQ8N7B6 248 aa13.13□□□□□ -0.31
CD48-203ENST00000613788 ANKK1Q8NFD2 765 aa13.13□□□□□ -0.31
CD48-203ENST00000613788 RNF128Q8TEB7 428 aa13.13□□□□□ -0.31
CD48-203ENST00000613788 TM9SF2Q99805 663 aa13.13□□□□□ -0.31
CD48-203ENST00000613788 SLC29A1Q99808 456 aa13.13□□□□□ -0.31
CD48-203ENST00000613788 RASSF4Q9H2L5 321 aa13.13□□□□□ -0.31
CD48-203ENST00000613788 VCXQ9H320 206 aa13.13□□□□□ -0.31
CD48-203ENST00000613788 VCX3BQ9H321 246 aa13.13□□□□□ -0.31
CD48-203ENST00000613788 FANCFQ9NPI8 374 aa13.13□□□□□ -0.31
CD48-203ENST00000613788 GLRX2Q9NS18 164 aa13.13□□□□□ -0.31
CD48-203ENST00000613788 IL20Q9NYY1 176 aa13.13□□□□□ -0.31
CD48-203ENST00000613788 KLHL9Q9P2J3 617 aa13.13□□□□□ -0.31
CD48-203ENST00000613788 NOX1Q9Y5S8 564 aa13.13□□□□□ -0.31
CD48-203ENST00000613788 TRGV8A0A0C4DH27 118 aa13.12□□□□□ -0.31
CD48-203ENST00000613788 A0A1W2PNV4 684 aa13.12□□□□□ -0.31
CD48-203ENST00000613788 ZNF814B7Z6K7 855 aa13.12□□□□□ -0.31
CD48-203ENST00000613788 C11orf98E9PRG8 122 aa13.12□□□□□ -0.31
CD48-203ENST00000613788 AQP8O94778 261 aa13.12□□□□□ -0.31
CD48-203ENST00000613788 TGM6O95932 706 aa13.12□□□□□ -0.31
CD48-203ENST00000613788 ZNF43P17038 809 aa13.12□□□□□ -0.31
CD48-203ENST00000613788 CDH2P19022 906 aaPredicted RBP13.12□□□□□ -0.31
CD48-203ENST00000613788 RPL4P36578 427 aaKnown RBP13.12□□□□□ -0.31
CD48-203ENST00000613788 RAD23AP54725 363 aa13.12□□□□□ -0.31
CD48-203ENST00000613788 FHL1Q13642 323 aa13.12□□□□□ -0.31
CD48-203ENST00000613788 C1DQ13901 141 aaKnown RBP13.12□□□□□ -0.31
CD48-203ENST00000613788 POU4F3Q15319 338 aa13.12□□□□□ -0.31
CD48-203ENST00000613788 FBXW10Q5XX13 1052 aa13.12□□□□□ -0.31
CD48-203ENST00000613788 ANKRD34AQ69YU3 496 aa13.12□□□□□ -0.31
CD48-203ENST00000613788 ABLIM2Q6H8Q1 611 aa13.12□□□□□ -0.31
CD48-203ENST00000613788 RTL6Q6ICC9 239 aa13.12□□□□□ -0.31
CD48-203ENST00000613788 OR2A2Q6IF42 318 aa13.12□□□□□ -0.31
CD48-203ENST00000613788 ZNF620Q6ZNG0 422 aa13.12□□□□□ -0.31
CD48-203ENST00000613788 UEVLDQ8IX04 471 aa13.12□□□□□ -0.31
CD48-203ENST00000613788 KDM8Q8N371 416 aa13.12□□□□□ -0.31
CD48-203ENST00000613788 OR52L1Q8NGH7 329 aa13.12□□□□□ -0.31
CD48-203ENST00000613788 MOSPD2Q8NHP6 518 aa13.12□□□□□ -0.31
CD48-203ENST00000613788 FANK1Q8TC84 345 aa13.12□□□□□ -0.31
CD48-203ENST00000613788 OR52D1Q9H346 318 aa13.12□□□□□ -0.31
CD48-203ENST00000613788 RNF122Q9H9V4 155 aa13.12□□□□□ -0.31
CD48-203ENST00000613788 MCCC2Q9HCC0 563 aa13.12□□□□□ -0.31
CD48-203ENST00000613788 GP6Q9HCN6 339 aa13.12□□□□□ -0.31
CD48-203ENST00000613788 INIPQ9NRY2 104 aa13.12□□□□□ -0.31
CD48-203ENST00000613788 KLHL13Q9P2N7 655 aa13.12□□□□□ -0.31
CD48-203ENST00000613788 REV1Q9UBZ9 1251 aa13.12□□□□□ -0.31
CD48-203ENST00000613788 TINAGQ9UJW2 476 aa13.12□□□□□ -0.31
CD48-203ENST00000613788 OSGIN2Q9Y236 505 aa13.12□□□□□ -0.31
CD48-203ENST00000613788 CDH10Q9Y6N8 788 aa13.12□□□□□ -0.31
CD48-203ENST00000613788 MPDZO75970 2070 aa13.11□□□□□ -0.31
CD48-203ENST00000613788 MBD3L4A6NDZ8 208 aaPredicted RBP13.11□□□□□ -0.31
CD48-203ENST00000613788 MBD3L3A6NE82 208 aaPredicted RBP13.11□□□□□ -0.31
CD48-203ENST00000613788 MBD3L5A6NJ08 208 aaPredicted RBP13.11□□□□□ -0.31
CD48-203ENST00000613788 H3BN98 237 aa13.11□□□□□ -0.31
CD48-203ENST00000613788 GPR171O14626 319 aa13.11□□□□□ -0.31
CD48-203ENST00000613788 RAMP1O60894 148 aa13.11□□□□□ -0.31
CD48-203ENST00000613788 C1QL1O75973 258 aa13.11□□□□□ -0.31
CD48-203ENST00000613788 PLGP00747 810 aaPredicted RBP13.11□□□□□ -0.31
CD48-203ENST00000613788 ZNF26P17031 533 aaPredicted RBP13.11□□□□□ -0.31
CD48-203ENST00000613788 KLK2P20151 261 aa13.11□□□□□ -0.31
CD48-203ENST00000613788 SLC6A6P31641 620 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms