RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 C4orf47A7E2U8 309 aa15.71■□□□□ 0.11
NEK3-206ENST00000611833 SCDO00767 359 aa15.71■□□□□ 0.11
NEK3-206ENST00000611833 RPP14O95059 124 aaKnown RBP15.71■□□□□ 0.11
NEK3-206ENST00000611833 ZNF24P17028 368 aa15.71■□□□□ 0.11
NEK3-206ENST00000611833 NANOS3P60323 173 aaKnown RBP15.71■□□□□ 0.11
NEK3-206ENST00000611833 CTXN1P60606 82 aa15.71■□□□□ 0.11
NEK3-206ENST00000611833 SERTAD2Q14140 314 aa15.71■□□□□ 0.11
NEK3-206ENST00000611833 ZNF74Q16587 644 aa15.71■□□□□ 0.11
NEK3-206ENST00000611833 ALG10Q5BKT4 473 aa15.71■□□□□ 0.11
NEK3-206ENST00000611833 LINGO2Q7L985 606 aa15.71■□□□□ 0.11
NEK3-206ENST00000611833 CMTM4Q8IZR5 234 aa15.71■□□□□ 0.11
NEK3-206ENST00000611833 ZNF285Q96NJ3 590 aa15.71■□□□□ 0.11
NEK3-206ENST00000611833 TSSK2Q96PF2 358 aa15.71■□□□□ 0.11
NEK3-206ENST00000611833 OR2M2Q96R28 347 aa15.71■□□□□ 0.11
NEK3-206ENST00000611833 C7orf50Q9BRJ6 194 aaKnown RBP15.71■□□□□ 0.11
NEK3-206ENST00000611833 TPSD1Q9BZJ3 242 aa15.71■□□□□ 0.11
NEK3-206ENST00000611833 PLCL2Q9UPR0 1127 aa15.71■□□□□ 0.11
NEK3-206ENST00000611833 CHURC1-FNTBB4DL54 471 aa15.71■□□□□ 0.1
NEK3-206ENST00000611833 PIN1P1O15428 100 aa15.71■□□□□ 0.1
NEK3-206ENST00000611833 GSTZ1O43708 216 aaPredicted RBP15.71■□□□□ 0.1
NEK3-206ENST00000611833 WNT1P04628 370 aa15.71■□□□□ 0.1
NEK3-206ENST00000611833 CD14P08571 375 aa15.71■□□□□ 0.1
NEK3-206ENST00000611833 FNTBP49356 437 aa15.71■□□□□ 0.1
NEK3-206ENST00000611833 GFERP55789 205 aa15.71■□□□□ 0.1
NEK3-206ENST00000611833 ANGPT1Q15389 498 aa15.71■□□□□ 0.1
NEK3-206ENST00000611833 COL13A1Q5TAT6 717 aaPredicted RBP15.71■□□□□ 0.1
NEK3-206ENST00000611833 LINC01590Q5TEZ4 76 aa15.71■□□□□ 0.1
NEK3-206ENST00000611833 SLC22A10Q63ZE4 541 aa15.71■□□□□ 0.1
NEK3-206ENST00000611833 CREB3L2Q70SY1 520 aa15.71■□□□□ 0.1
NEK3-206ENST00000611833 FAM220AQ7Z4H9 259 aa15.71■□□□□ 0.1
NEK3-206ENST00000611833 ATG4DQ86TL0 474 aaPredicted RBP15.71■□□□□ 0.1
NEK3-206ENST00000611833 DEFB119Q8N690 84 aa15.71■□□□□ 0.1
NEK3-206ENST00000611833 LSM14AQ8ND56 463 aaKnown RBP15.71■□□□□ 0.1
NEK3-206ENST00000611833 OR11H7Q8NGC8 314 aa15.71■□□□□ 0.1
NEK3-206ENST00000611833 SMIM4Q8WVI0 70 aa15.71■□□□□ 0.1
NEK3-206ENST00000611833 ADAD1Q96M93 576 aaKnown RBP15.71■□□□□ 0.1
NEK3-206ENST00000611833 CMTM3Q96MX0 182 aa15.71■□□□□ 0.1
NEK3-206ENST00000611833 MOGAT1Q96PD6 335 aa15.71■□□□□ 0.1
NEK3-206ENST00000611833 CCNL2Q96S94 520 aaPredicted RBP15.71■□□□□ 0.1
NEK3-206ENST00000611833 PELOQ9BRX2 385 aaKnown RBP15.71■□□□□ 0.1
NEK3-206ENST00000611833 AUNIPQ9H7T9 357 aa15.71■□□□□ 0.1
NEK3-206ENST00000611833 PNO1Q9NRX1 252 aaKnown RBP15.71■□□□□ 0.1
NEK3-206ENST00000611833 IFITM5A6NNB3 132 aa15.7■□□□□ 0.1
NEK3-206ENST00000611833 CTDSPLO15194 276 aa15.7■□□□□ 0.1
NEK3-206ENST00000611833 OIP5O43482 229 aa15.7■□□□□ 0.1
NEK3-206ENST00000611833 ZFPL1O95159 310 aa15.7■□□□□ 0.1
NEK3-206ENST00000611833 TACSTD2P09758 323 aa15.7■□□□□ 0.1
NEK3-206ENST00000611833 H2AFB2P0C5Z0 115 aa15.7■□□□□ 0.1
NEK3-206ENST00000611833 ANKRD34CP0C6C1 535 aa15.7■□□□□ 0.1
NEK3-206ENST00000611833 MAGEB1P43366 347 aa15.7■□□□□ 0.1
NEK3-206ENST00000611833 GNG2P59768 71 aa15.7■□□□□ 0.1
NEK3-206ENST00000611833 CD276Q5ZPR3 534 aa15.7■□□□□ 0.1
NEK3-206ENST00000611833 CBLN3Q6UW01 205 aa15.7■□□□□ 0.1
NEK3-206ENST00000611833 EMC7Q9NPA0 242 aa15.7■□□□□ 0.1
NEK3-206ENST00000611833 ZNF346Q9UL40 294 aaKnown RBP15.7■□□□□ 0.1
NEK3-206ENST00000611833 HIF3AQ9Y2N7 669 aa15.7■□□□□ 0.1
NEK3-206ENST00000611833 IGHV5-51A0A0C4DH38 117 aa15.69■□□□□ 0.1
NEK3-206ENST00000611833 TMEM72A0PK05 275 aa15.69■□□□□ 0.1
NEK3-206ENST00000611833 A8MUA0 341 aa15.69■□□□□ 0.1
NEK3-206ENST00000611833 TSC22D2O75157 780 aa15.69■□□□□ 0.1
NEK3-206ENST00000611833 ITGA10O75578 1167 aa15.69■□□□□ 0.1
NEK3-206ENST00000611833 F13BP05160 661 aa15.69■□□□□ 0.1
NEK3-206ENST00000611833 ADRB1P08588 477 aa15.69■□□□□ 0.1
NEK3-206ENST00000611833 GLULP15104 373 aa15.69■□□□□ 0.1
NEK3-206ENST00000611833 GDNFP39905 211 aa15.69■□□□□ 0.1
NEK3-206ENST00000611833 DYRK1AQ13627 763 aa15.69■□□□□ 0.1
NEK3-206ENST00000611833 SLC6A19Q695T7 634 aa15.69■□□□□ 0.1
NEK3-206ENST00000611833 SLC16A9Q7RTY1 509 aa15.69■□□□□ 0.1
NEK3-206ENST00000611833 LUZP2Q86TE4 346 aa15.69■□□□□ 0.1
NEK3-206ENST00000611833 FAM71CQ8NEG0 241 aa15.69■□□□□ 0.1
NEK3-206ENST00000611833 TGM7Q96PF1 710 aa15.69■□□□□ 0.1
NEK3-206ENST00000611833 SPRTNQ9H040 489 aaPredicted RBP15.69■□□□□ 0.1
NEK3-206ENST00000611833 SRA1Q9HD15 236 aaKnown RBP15.69■□□□□ 0.1
NEK3-206ENST00000611833 PRR32B1ATL7 298 aa15.69■□□□□ 0.1
NEK3-206ENST00000611833 AIPO00170 330 aa15.69■□□□□ 0.1
NEK3-206ENST00000611833 ZNF264O43296 627 aa15.69■□□□□ 0.1
NEK3-206ENST00000611833 OR8G3PP0DMU2 310 aa15.69■□□□□ 0.1
NEK3-206ENST00000611833 ANXA3P12429 323 aa15.69■□□□□ 0.1
NEK3-206ENST00000611833 MAOBP27338 520 aa15.69■□□□□ 0.1
NEK3-206ENST00000611833 CD1CP29017 333 aa15.69■□□□□ 0.1
NEK3-206ENST00000611833 ADH7P40394 386 aa15.69■□□□□ 0.1
NEK3-206ENST00000611833 SLC25A1P53007 311 aa15.69■□□□□ 0.1
NEK3-206ENST00000611833 GPLD1P80108 840 aa15.69■□□□□ 0.1
NEK3-206ENST00000611833 SKP2Q13309 424 aa15.69■□□□□ 0.1
NEK3-206ENST00000611833 KLF9Q13886 244 aaPredicted RBP15.69■□□□□ 0.1
NEK3-206ENST00000611833 ELOCQ15369 112 aa15.69■□□□□ 0.1
NEK3-206ENST00000611833 FCRLAQ7L513 359 aa15.69■□□□□ 0.1
NEK3-206ENST00000611833 C9orf62Q8N4C0 152 aa15.69■□□□□ 0.1
NEK3-206ENST00000611833 ZNF321PQ8N8H1 164 aa15.69■□□□□ 0.1
NEK3-206ENST00000611833 OR7G1Q8NGA0 311 aa15.69■□□□□ 0.1
NEK3-206ENST00000611833 ZNF563Q8TA94 476 aa15.69■□□□□ 0.1
NEK3-206ENST00000611833 LMX1AQ8TE12 382 aa15.69■□□□□ 0.1
NEK3-206ENST00000611833 ZNF431Q8TF32 576 aaPredicted RBP15.69■□□□□ 0.1
NEK3-206ENST00000611833 GFI1Q99684 422 aa15.69■□□□□ 0.1
NEK3-206ENST00000611833 RANBP3Q9H6Z4 567 aaPredicted RBP15.69■□□□□ 0.1
NEK3-206ENST00000611833 MMP25Q9NPA2 562 aa15.69■□□□□ 0.1
NEK3-206ENST00000611833 MRPL15Q9P015 296 aaKnown RBP15.69■□□□□ 0.1
NEK3-206ENST00000611833 RABL2AQ9UBK7 228 aaPredicted RBP15.69■□□□□ 0.1
NEK3-206ENST00000611833 GRHPRQ9UBQ7 328 aa15.69■□□□□ 0.1
NEK3-206ENST00000611833 RABL2BQ9UNT1 228 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms