RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 SPECC1LQ69YQ0 1117 aa3.98□□□□□ -1.77
LINC00397-202ENST00000606785 CCDC137Q6PK04 289 aaKnown RBP3.98□□□□□ -1.77
LINC00397-202ENST00000606785 GPRIN3Q6ZVF9 776 aa3.98□□□□□ -1.77
LINC00397-202ENST00000606785 SLC25A42Q86VD7 318 aa3.98□□□□□ -1.77
LINC00397-202ENST00000606785 LRRC6Q86X45 466 aa3.98□□□□□ -1.77
LINC00397-202ENST00000606785 HIPK1Q86Z02 1210 aa3.98□□□□□ -1.77
LINC00397-202ENST00000606785 SYCE1Q8N0S2 351 aa3.98□□□□□ -1.77
LINC00397-202ENST00000606785 ZNF680Q8NEM1 530 aa3.98□□□□□ -1.77
LINC00397-202ENST00000606785 OR9A1PQ8NGU1 263 aa3.98□□□□□ -1.77
LINC00397-202ENST00000606785 ZNF461Q8TAF7 563 aa3.98□□□□□ -1.77
LINC00397-202ENST00000606785 ASZ1Q8WWH4 475 aa3.98□□□□□ -1.77
LINC00397-202ENST00000606785 HTR3CQ8WXA8 447 aa3.98□□□□□ -1.77
LINC00397-202ENST00000606785 IFT81Q8WYA0 676 aa3.98□□□□□ -1.77
LINC00397-202ENST00000606785 CXorf40BQ96DE9 158 aa3.98□□□□□ -1.77
LINC00397-202ENST00000606785 MS4A14Q96JA4 679 aa3.98□□□□□ -1.77
LINC00397-202ENST00000606785 SERAC1Q96JX3 654 aa3.98□□□□□ -1.77
LINC00397-202ENST00000606785 C12orf42Q96LP6 360 aa3.98□□□□□ -1.77
LINC00397-202ENST00000606785 CCDC42Q96M95 316 aa3.98□□□□□ -1.77
LINC00397-202ENST00000606785 FMO2Q99518 471 aa3.98□□□□□ -1.77
LINC00397-202ENST00000606785 DPH7Q9BTV6 452 aa3.98□□□□□ -1.77
LINC00397-202ENST00000606785 KRTAP2-2Q9BYT5 123 aa3.98□□□□□ -1.77
LINC00397-202ENST00000606785 NMRAL1Q9HBL8 299 aa3.98□□□□□ -1.77
LINC00397-202ENST00000606785 NEK6Q9HC98 313 aa3.98□□□□□ -1.77
LINC00397-202ENST00000606785 NT5MQ9NPB1 228 aa3.98□□□□□ -1.77
LINC00397-202ENST00000606785 MRPL40Q9NQ50 206 aaKnown RBP3.98□□□□□ -1.77
LINC00397-202ENST00000606785 MDFICQ9P1T7 246 aa3.98□□□□□ -1.77
LINC00397-202ENST00000606785 IKZF2Q9UKS7 526 aa3.98□□□□□ -1.77
LINC00397-202ENST00000606785 COPS3Q9UNS2 423 aa3.98□□□□□ -1.77
LINC00397-202ENST00000606785 PEX16Q9Y5Y5 336 aa3.98□□□□□ -1.77
LINC00397-202ENST00000606785 PPIP5K1Q6PFW1 1433 aa3.97□□□□□ -1.77
LINC00397-202ENST00000606785 A0A0J9YWU9 116 aa3.97□□□□□ -1.77
LINC00397-202ENST00000606785 LOC100506127A0A0U1RQW1 187 aa3.97□□□□□ -1.77
LINC00397-202ENST00000606785 A0A1B0GWB2 263 aa3.97□□□□□ -1.77
LINC00397-202ENST00000606785 ZNF705EA8MWA4 302 aaPredicted RBP3.97□□□□□ -1.77
LINC00397-202ENST00000606785 IDSB3KWA1 339 aa3.97□□□□□ -1.77
LINC00397-202ENST00000606785 TRAPPC3O43617 180 aa3.97□□□□□ -1.77
LINC00397-202ENST00000606785 HCN1O60741 890 aa3.97□□□□□ -1.77
LINC00397-202ENST00000606785 CBR3O75828 277 aa3.97□□□□□ -1.77
LINC00397-202ENST00000606785 OTCP00480 354 aa3.97□□□□□ -1.77
LINC00397-202ENST00000606785 KRT7P08729 469 aa3.97□□□□□ -1.77
LINC00397-202ENST00000606785 ADORA2BP29275 332 aa3.97□□□□□ -1.77
LINC00397-202ENST00000606785 EPHX2P34913 555 aa3.97□□□□□ -1.77
LINC00397-202ENST00000606785 RPL34P49207 117 aaKnown RBP3.97□□□□□ -1.77
LINC00397-202ENST00000606785 PLP1P60201 277 aa3.97□□□□□ -1.77
LINC00397-202ENST00000606785 RPS14P62263 151 aaKnown RBP3.97□□□□□ -1.77
LINC00397-202ENST00000606785 RPL32P62910 135 aaKnown RBP3.97□□□□□ -1.77
LINC00397-202ENST00000606785 PAX2Q02962 417 aa3.97□□□□□ -1.77
LINC00397-202ENST00000606785 TTMPQ5BVD1 217 aa3.97□□□□□ -1.77
LINC00397-202ENST00000606785 SPANXN2Q5MJ10 180 aa3.97□□□□□ -1.77
LINC00397-202ENST00000606785 CLVS2Q5SYC1 327 aa3.97□□□□□ -1.77
LINC00397-202ENST00000606785 RAET1LQ5VY80 246 aa3.97□□□□□ -1.77
LINC00397-202ENST00000606785 PTRHD1Q6GMV3 140 aaKnown RBP3.97□□□□□ -1.77
LINC00397-202ENST00000606785 DEGS2Q6QHC5 323 aa3.97□□□□□ -1.77
LINC00397-202ENST00000606785 METTL7BQ6UX53 244 aa3.97□□□□□ -1.77
LINC00397-202ENST00000606785 SVOPLQ8N434 492 aa3.97□□□□□ -1.77
LINC00397-202ENST00000606785 CCNYL1Q8N7R7 359 aa3.97□□□□□ -1.77
LINC00397-202ENST00000606785 SDR9C7Q8NEX9 313 aa3.97□□□□□ -1.77
LINC00397-202ENST00000606785 OR1L6Q8NGR2 347 aa3.97□□□□□ -1.77
LINC00397-202ENST00000606785 FAM110BQ8TC76 370 aa3.97□□□□□ -1.77
LINC00397-202ENST00000606785 NUS1Q96E22 293 aa3.97□□□□□ -1.77
LINC00397-202ENST00000606785 RNF2Q99496 336 aa3.97□□□□□ -1.77
LINC00397-202ENST00000606785 CHP1Q99653 195 aa3.97□□□□□ -1.77
LINC00397-202ENST00000606785 MTG1Q9BT17 334 aaPredicted RBP3.97□□□□□ -1.77
LINC00397-202ENST00000606785 MRPL37Q9BZE1 423 aaKnown RBP3.97□□□□□ -1.77
LINC00397-202ENST00000606785 NARFLQ9H6Q4 476 aa3.97□□□□□ -1.77
LINC00397-202ENST00000606785 STX18Q9P2W9 335 aaKnown RBP3.97□□□□□ -1.77
LINC00397-202ENST00000606785 DPM3Q9P2X0 92 aa3.97□□□□□ -1.77
LINC00397-202ENST00000606785 UXTQ9UBK9 157 aaPredicted RBP3.97□□□□□ -1.77
LINC00397-202ENST00000606785 CSDC2Q9Y534 153 aaKnown RBP3.97□□□□□ -1.77
LINC00397-202ENST00000606785 ANKRD30BQ9BXX2 1392 aa3.97□□□□□ -1.77
LINC00397-202ENST00000606785 ANKRD30AQ9BXX3 1397 aa3.97□□□□□ -1.77
LINC00397-202ENST00000606785 A0A1B0GUS0 222 aa3.96□□□□□ -1.78
LINC00397-202ENST00000606785 A0A1W2PPV9 198 aa3.96□□□□□ -1.78
LINC00397-202ENST00000606785 FRG2CA6NGY1 282 aa3.96□□□□□ -1.78
LINC00397-202ENST00000606785 OR2AG2A6NM03 316 aa3.96□□□□□ -1.78
LINC00397-202ENST00000606785 A8MXQ7 604 aa3.96□□□□□ -1.78
LINC00397-202ENST00000606785 E9PQ18 207 aa3.96□□□□□ -1.78
LINC00397-202ENST00000606785 GATCO43716 136 aaKnown RBP3.96□□□□□ -1.78
LINC00397-202ENST00000606785 CTAG2O75638 210 aa3.96□□□□□ -1.78
LINC00397-202ENST00000606785 RBBP9O75884 186 aa3.96□□□□□ -1.78
LINC00397-202ENST00000606785 LCA5LO95447 670 aa3.96□□□□□ -1.78
LINC00397-202ENST00000606785 IGHV3-13P01766 116 aa3.96□□□□□ -1.78
LINC00397-202ENST00000606785 SNRPAP09012 282 aaKnown RBP3.96□□□□□ -1.78
LINC00397-202ENST00000606785 TNNI1P19237 187 aa3.96□□□□□ -1.78
LINC00397-202ENST00000606785 EIF2S2P20042 333 aaKnown RBP3.96□□□□□ -1.78
LINC00397-202ENST00000606785 CRABP2P29373 138 aa3.96□□□□□ -1.78
LINC00397-202ENST00000606785 HNRNPH3P31942 346 aaKnown RBP3.96□□□□□ -1.78
LINC00397-202ENST00000606785 OPRD1P41143 372 aa3.96□□□□□ -1.78
LINC00397-202ENST00000606785 SYKP43405 635 aa3.96□□□□□ -1.78
LINC00397-202ENST00000606785 IST1P53990 364 aa3.96□□□□□ -1.78
LINC00397-202ENST00000606785 LIPEQ05469 1076 aa3.96□□□□□ -1.78
LINC00397-202ENST00000606785 CDC20Q12834 499 aa3.96□□□□□ -1.78
LINC00397-202ENST00000606785 SERTAD2Q14140 314 aa3.96□□□□□ -1.78
LINC00397-202ENST00000606785 GRB7Q14451 532 aa3.96□□□□□ -1.78
LINC00397-202ENST00000606785 DUSP7Q16829 419 aa3.96□□□□□ -1.78
LINC00397-202ENST00000606785 GLYR1Q49A26 553 aaPredicted RBP3.96□□□□□ -1.78
LINC00397-202ENST00000606785 KLHL22Q53GT1 634 aa3.96□□□□□ -1.78
LINC00397-202ENST00000606785 TTC23LQ6PF05 361 aa3.96□□□□□ -1.78
LINC00397-202ENST00000606785 TPGS1Q6ZTW0 290 aa3.96□□□□□ -1.78
LINC00397-202ENST00000606785 BIVMQ86UB2 503 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms