RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 VLDLRP98155 873 aa4.59□□□□□ -1.68
SPTBN1-206ENST00000602898 ZBTB6Q15916 424 aa4.59□□□□□ -1.68
SPTBN1-206ENST00000602898 ZNF648Q5T619 568 aaPredicted RBP4.59□□□□□ -1.68
SPTBN1-206ENST00000602898 FAM198BQ6UWH4 519 aa4.59□□□□□ -1.68
SPTBN1-206ENST00000602898 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.59□□□□□ -1.68
SPTBN1-206ENST00000602898 OR13C5Q8NGS8 318 aa4.59□□□□□ -1.68
SPTBN1-206ENST00000602898 OR14L1PQ8NHC6 308 aa4.59□□□□□ -1.68
SPTBN1-206ENST00000602898 NUBPLQ8TB37 319 aa4.59□□□□□ -1.68
SPTBN1-206ENST00000602898 SOCS4Q8WXH5 440 aa4.59□□□□□ -1.68
SPTBN1-206ENST00000602898 ATG4AQ8WYN0 398 aa4.59□□□□□ -1.68
SPTBN1-206ENST00000602898 LGALS12Q96DT0 336 aa4.59□□□□□ -1.68
SPTBN1-206ENST00000602898 C3orf30Q96M34 536 aa4.59□□□□□ -1.68
SPTBN1-206ENST00000602898 SYT11Q9BT88 431 aa4.59□□□□□ -1.68
SPTBN1-206ENST00000602898 MRI1Q9BV20 369 aa4.59□□□□□ -1.68
SPTBN1-206ENST00000602898 DPCDQ9BVM2 203 aaPredicted RBP4.59□□□□□ -1.68
SPTBN1-206ENST00000602898 CHRNA10Q9GZZ6 450 aa4.59□□□□□ -1.68
SPTBN1-206ENST00000602898 ING2Q9H160 280 aa4.59□□□□□ -1.68
SPTBN1-206ENST00000602898 DCSTAMPQ9H295 470 aa4.59□□□□□ -1.68
SPTBN1-206ENST00000602898 SLC38A1Q9H2H9 487 aa4.59□□□□□ -1.68
SPTBN1-206ENST00000602898 PLEKHA1Q9HB21 404 aa4.59□□□□□ -1.68
SPTBN1-206ENST00000602898 GCM1Q9NP62 436 aa4.59□□□□□ -1.68
SPTBN1-206ENST00000602898 OR12D3Q9UGF7 316 aa4.59□□□□□ -1.68
SPTBN1-206ENST00000602898 FOXA2Q9Y261 457 aaPredicted RBP4.59□□□□□ -1.68
SPTBN1-206ENST00000602898 MEMO1Q9Y316 297 aa4.59□□□□□ -1.68
SPTBN1-206ENST00000602898 SNED1Q8TER0 1413 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 TMEM265A0A087WTH1 108 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 FAM240BA0A1B0GVZ2 78 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 C1orf196B1AJZ1 125 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 SIGLEC5O15389 551 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 RS1O15537 224 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 OR10H3O60404 316 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 DFFBO76075 338 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 SUPT7LO94864 414 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 MPC2O95563 127 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 FURINP09958 794 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 FTH1P19P0C7X4 201 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 RBM34P42696 430 aaKnown RBP4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 CSNK1A1P48729 337 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 GLUD2P49448 558 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 SRP9P49458 86 aaKnown RBP4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 ATP1B3P54709 279 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 TMEM33P57088 247 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 NCS1P62166 190 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 CHRNB3Q05901 458 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 CEACAM7Q14002 265 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 FASTKQ14296 549 aaKnown RBP4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 EXOC3L2Q2M3D2 409 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 FAM182AQ5T1J6 154 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 GPRC6AQ5T6X5 926 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 VWA1Q6PCB0 445 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 BTNL8Q6UX41 500 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 THOC6Q86W42 341 aaKnown RBP4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 CMTM8Q8IZV2 173 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 MUC20Q8N307 709 aaPredicted RBP4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 LMNTD1Q8N9Z9 388 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 MFSD9Q8NBP5 474 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 OR5J2Q8NH18 312 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 WDR20Q8TBZ3 569 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 ERGIC1Q969X5 290 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 SLCO4A1Q96BD0 722 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 ECHDC3Q96DC8 303 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 ZC3HAV1LQ96H79 300 aaKnown RBP4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 WFIKKN1Q96NZ8 548 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 SPAG8Q99932 426 aaPredicted RBP4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 TIMM29Q9BSF4 260 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 TMEM208Q9BTX3 173 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 MMP28Q9H239 520 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 PIGMQ9H3S5 423 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 FN3KQ9H479 309 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 SYNPO2LQ9H987 977 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 ADAP2Q9NPF8 381 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 PRSS16Q9NQE7 514 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 ASAH2Q9NR71 780 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 ACSS1Q9NUB1 689 aaPredicted RBP4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 TMEM248Q9NWD8 314 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 KCTD3Q9Y597 815 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 SIPA1L3O60292 1781 aaPredicted RBP4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 A0A1B0GW55 424 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 PRR19A6NJB7 356 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 HTR1AP08908 422 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 DUX4L2P0CJ85 424 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 DUX4L3P0CJ86 424 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 DUX4L4P0CJ87 422 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 DUX4L5P0CJ88 424 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 DUX4L6P0CJ89 424 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 DUX4L7P0CJ90 424 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 MAP2K4P45985 399 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 LIMS1P48059 325 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 FMO5P49326 533 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 NUDT2P50583 147 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 LILRA4P59901 499 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 UBE2MP61081 183 aaKnown RBP4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 RPL11P62913 178 aaKnown RBP4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 DCDP81605 110 aaKnown RBP4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 DUSP8Q13202 625 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 NDUFA9Q16795 377 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 MEP1AQ16819 746 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 C14orf28Q4W4Y0 310 aa4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 SYT6Q5T7P8 510 aaPredicted RBP4.58□□□□□ -1.68
SPTBN1-206ENST00000602898 REEP3Q6NUK4 255 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms