RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 MSI2Q96DH6 328 aaKnown RBP15.63■□□□□ 0.09
CHMP2A-208ENST00000601220 KTI12Q96EK9 354 aaPredicted RBP15.63■□□□□ 0.09
CHMP2A-208ENST00000601220 FOXN4Q96NZ1 517 aa15.63■□□□□ 0.09
CHMP2A-208ENST00000601220 PLK3Q9H4B4 646 aa15.63■□□□□ 0.09
CHMP2A-208ENST00000601220 BCL2L10Q9HD36 194 aa15.63■□□□□ 0.09
CHMP2A-208ENST00000601220 SEC14L4Q9UDX3 406 aa15.63■□□□□ 0.09
CHMP2A-208ENST00000601220 ARFGEF3Q5TH69 2177 aa15.63■□□□□ 0.09
CHMP2A-208ENST00000601220 A0A096LPE4 126 aa15.62■□□□□ 0.09
CHMP2A-208ENST00000601220 A0A1W2PPZ6 126 aa15.62■□□□□ 0.09
CHMP2A-208ENST00000601220 B9A039 149 aa15.62■□□□□ 0.09
CHMP2A-208ENST00000601220 KRT33AO76009 404 aa15.62■□□□□ 0.09
CHMP2A-208ENST00000601220 PDE5AO76074 875 aa15.62■□□□□ 0.09
CHMP2A-208ENST00000601220 OR4A8P0C604 315 aa15.62■□□□□ 0.09
CHMP2A-208ENST00000601220 HOXB1P14653 301 aaPredicted RBP15.62■□□□□ 0.09
CHMP2A-208ENST00000601220 SNRPD2P62316 118 aaKnown RBP15.62■□□□□ 0.09
CHMP2A-208ENST00000601220 C6orf89Q6UWU4 347 aa15.62■□□□□ 0.09
CHMP2A-208ENST00000601220 MYPOPQ86VE0 399 aaPredicted RBP15.62■□□□□ 0.09
CHMP2A-208ENST00000601220 ANKK1Q8NFD2 765 aa15.62■□□□□ 0.09
CHMP2A-208ENST00000601220 OR9I1Q8NGQ6 314 aa15.62■□□□□ 0.09
CHMP2A-208ENST00000601220 GTF2H4Q92759 462 aa15.62■□□□□ 0.09
CHMP2A-208ENST00000601220 SLC35B4Q969S0 331 aa15.62■□□□□ 0.09
CHMP2A-208ENST00000601220 ITCHQ96J02 903 aa15.62■□□□□ 0.09
CHMP2A-208ENST00000601220 OR52B2Q96RD2 323 aa15.62■□□□□ 0.09
CHMP2A-208ENST00000601220 PAIP1Q9H074 479 aaKnown RBP15.62■□□□□ 0.09
CHMP2A-208ENST00000601220 SHARPINQ9H0F6 387 aa15.62■□□□□ 0.09
CHMP2A-208ENST00000601220 THUMPD1Q9NXG2 353 aaKnown RBP15.62■□□□□ 0.09
CHMP2A-208ENST00000601220 ZNF232Q9UNY5 417 aa15.62■□□□□ 0.09
CHMP2A-208ENST00000601220 IFT52Q9Y366 437 aa15.62■□□□□ 0.09
CHMP2A-208ENST00000601220 PCDHB14Q9Y5E9 798 aa15.62■□□□□ 0.09
CHMP2A-208ENST00000601220 FKBP7Q9Y680 259 aa15.62■□□□□ 0.09
CHMP2A-208ENST00000601220 LOC390937A0A1W2PQ73 354 aa15.61■□□□□ 0.09
CHMP2A-208ENST00000601220 TMEM120BA0PK00 339 aa15.61■□□□□ 0.09
CHMP2A-208ENST00000601220 ZNF503-AS2A6NEH8 195 aa15.61■□□□□ 0.09
CHMP2A-208ENST00000601220 SLCO1B7G3V0H7 640 aa15.61■□□□□ 0.09
CHMP2A-208ENST00000601220 CRYAAP02489 173 aa15.61■□□□□ 0.09
CHMP2A-208ENST00000601220 IGFBP1P08833 259 aaPredicted RBP15.61■□□□□ 0.09
CHMP2A-208ENST00000601220 CELA3BP08861 270 aa15.61■□□□□ 0.09
CHMP2A-208ENST00000601220 BMP2P12643 396 aa15.61■□□□□ 0.09
CHMP2A-208ENST00000601220 NCF2P19878 526 aaPredicted RBP15.61■□□□□ 0.09
CHMP2A-208ENST00000601220 UBE2NP61088 152 aaKnown RBP15.61■□□□□ 0.09
CHMP2A-208ENST00000601220 ARF1P84077 181 aaKnown RBP15.61■□□□□ 0.09
CHMP2A-208ENST00000601220 ROR2Q01974 943 aaKnown RBP15.61■□□□□ 0.09
CHMP2A-208ENST00000601220 GGTLC2Q14390 218 aa15.61■□□□□ 0.09
CHMP2A-208ENST00000601220 RGNQ15493 299 aa15.61■□□□□ 0.09
CHMP2A-208ENST00000601220 ZNF311Q5JNZ3 666 aa15.61■□□□□ 0.09
CHMP2A-208ENST00000601220 NXNQ6DKJ4 435 aa15.61■□□□□ 0.09
CHMP2A-208ENST00000601220 COMTD1Q86VU5 262 aa15.61■□□□□ 0.09
CHMP2A-208ENST00000601220 NUP37Q8NFH4 326 aa15.61■□□□□ 0.09
CHMP2A-208ENST00000601220 MAL2Q969L2 176 aa15.61■□□□□ 0.09
CHMP2A-208ENST00000601220 SLC25A36Q96CQ1 311 aa15.61■□□□□ 0.09
CHMP2A-208ENST00000601220 ZNF837Q96EG3 531 aaPredicted RBP15.61■□□□□ 0.09
CHMP2A-208ENST00000601220 PIMREGQ9BSJ6 248 aa15.61■□□□□ 0.09
CHMP2A-208ENST00000601220 SOX7Q9BT81 388 aa15.61■□□□□ 0.09
CHMP2A-208ENST00000601220 A4GALTQ9NPC4 353 aa15.61■□□□□ 0.09
CHMP2A-208ENST00000601220 RCE1Q9Y256 329 aa15.61■□□□□ 0.09
CHMP2A-208ENST00000601220 HEATR1Q9H583 2144 aaKnown RBP15.61■□□□□ 0.09
CHMP2A-208ENST00000601220 LOC100289279A0A1B0GTE1 492 aa15.6■□□□□ 0.09
CHMP2A-208ENST00000601220 TMEM129A0AVI4 362 aa15.6■□□□□ 0.09
CHMP2A-208ENST00000601220 AHSA1O95433 338 aa15.6■□□□□ 0.09
CHMP2A-208ENST00000601220 ANP32DO95626 131 aa15.6■□□□□ 0.09
CHMP2A-208ENST00000601220 CBR1P16152 277 aa15.6■□□□□ 0.09
CHMP2A-208ENST00000601220 RPS5P46782 204 aaKnown RBP15.6■□□□□ 0.09
CHMP2A-208ENST00000601220 PPOXP50336 477 aa15.6■□□□□ 0.09
CHMP2A-208ENST00000601220 POLR2JP52435 117 aaKnown RBP15.6■□□□□ 0.09
CHMP2A-208ENST00000601220 SLC18A1P54219 525 aa15.6■□□□□ 0.09
CHMP2A-208ENST00000601220 SH3BGRP55822 239 aaPredicted RBP15.6■□□□□ 0.09
CHMP2A-208ENST00000601220 CLDN17P56750 224 aa15.6■□□□□ 0.09
CHMP2A-208ENST00000601220 FAM120AOSQ5T036 256 aa15.6■□□□□ 0.09
CHMP2A-208ENST00000601220 ATG16L1Q676U5 607 aa15.6■□□□□ 0.09
CHMP2A-208ENST00000601220 OR4F15Q8NGB8 312 aa15.6■□□□□ 0.09
CHMP2A-208ENST00000601220 TAAR8Q969N4 342 aa15.6■□□□□ 0.09
CHMP2A-208ENST00000601220 OXGR1Q96P68 337 aa15.6■□□□□ 0.09
CHMP2A-208ENST00000601220 DOK1Q99704 481 aa15.6■□□□□ 0.09
CHMP2A-208ENST00000601220 VRK1Q99986 396 aaPredicted RBP15.6■□□□□ 0.09
CHMP2A-208ENST00000601220 RMND5AQ9H871 391 aa15.6■□□□□ 0.09
CHMP2A-208ENST00000601220 GPR35Q9HC97 309 aa15.6■□□□□ 0.09
CHMP2A-208ENST00000601220 MYOZ1Q9NP98 299 aaPredicted RBP15.6■□□□□ 0.09
CHMP2A-208ENST00000601220 IGKV1D-42A0A075B6H8 117 aa15.59■□□□□ 0.09
CHMP2A-208ENST00000601220 LOC102725191A0A1B0GVB3 256 aa15.59■□□□□ 0.09
CHMP2A-208ENST00000601220 UBDO15205 165 aa15.59■□□□□ 0.09
CHMP2A-208ENST00000601220 HTR2AP28223 471 aa15.59■□□□□ 0.09
CHMP2A-208ENST00000601220 FAM166AQ6J272 317 aa15.59■□□□□ 0.09
CHMP2A-208ENST00000601220 NHLRC1Q6VVB1 395 aa15.59■□□□□ 0.09
CHMP2A-208ENST00000601220 IL17RELQ6ZVW7 336 aa15.59■□□□□ 0.09
CHMP2A-208ENST00000601220 SLC46A3Q7Z3Q1 461 aa15.59■□□□□ 0.09
CHMP2A-208ENST00000601220 MSRB3Q8IXL7 192 aa15.59■□□□□ 0.09
CHMP2A-208ENST00000601220 TMEM123Q8N131 208 aa15.59■□□□□ 0.09
CHMP2A-208ENST00000601220 LSMEM1Q8N8F7 131 aa15.59■□□□□ 0.09
CHMP2A-208ENST00000601220 MGARPQ8TDB4 240 aa15.59■□□□□ 0.09
CHMP2A-208ENST00000601220 KCNS3Q9BQ31 491 aa15.59■□□□□ 0.09
CHMP2A-208ENST00000601220 BPESC1Q9GZL8 116 aa15.59■□□□□ 0.09
CHMP2A-208ENST00000601220 ARMC7Q9H6L4 198 aa15.59■□□□□ 0.09
CHMP2A-208ENST00000601220 ZNF442Q9H7R0 627 aa15.59■□□□□ 0.09
CHMP2A-208ENST00000601220 C12orf10Q9HB07 376 aa15.59■□□□□ 0.09
CHMP2A-208ENST00000601220 CLIC1O00299 241 aa15.58■□□□□ 0.08
CHMP2A-208ENST00000601220 STAMBPO95630 424 aa15.58■□□□□ 0.08
CHMP2A-208ENST00000601220 APEHP13798 732 aaKnown RBP15.58■□□□□ 0.08
CHMP2A-208ENST00000601220 ZNF23P17027 643 aa15.58■□□□□ 0.08
CHMP2A-208ENST00000601220 ZNF43P17038 809 aa15.58■□□□□ 0.08
CHMP2A-208ENST00000601220 GIFP27352 417 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms