RNA–Protein interactions for RNA: ENST00000600552.5

SHKBP1-223, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-223ENST00000600552 ANKRD16Q6P6B7 361 aa15.31■□□□□ 0.04
SHKBP1-223ENST00000600552 STK35Q8TDR2 534 aa15.31■□□□□ 0.04
SHKBP1-223ENST00000600552 TMEM158Q8WZ71 300 aa15.31■□□□□ 0.04
SHKBP1-223ENST00000600552 PROX1Q92786 737 aa15.31■□□□□ 0.04
SHKBP1-223ENST00000600552 FOXN4Q96NZ1 517 aa15.31■□□□□ 0.04
SHKBP1-223ENST00000600552 PIMREGQ9BSJ6 248 aa15.31■□□□□ 0.04
SHKBP1-223ENST00000600552 PRR14Q9BWN1 585 aa15.31■□□□□ 0.04
SHKBP1-223ENST00000600552 SDR39U1Q9NRG7 319 aaPredicted RBP15.31■□□□□ 0.04
SHKBP1-223ENST00000600552 CA10Q9NS85 328 aa15.31■□□□□ 0.04
SHKBP1-223ENST00000600552 PCDHB14Q9Y5E9 798 aa15.31■□□□□ 0.04
SHKBP1-223ENST00000600552 MXRA5Q9NR99 2828 aa15.31■□□□□ 0.04
SHKBP1-223ENST00000600552 A0A096LPI6 279 aa15.3■□□□□ 0.04
SHKBP1-223ENST00000600552 LOC100289279A0A1B0GTE1 492 aa15.3■□□□□ 0.04
SHKBP1-223ENST00000600552 TMEM229AB2RXF0 380 aa15.3■□□□□ 0.04
SHKBP1-223ENST00000600552 LMX1BO60663 402 aa15.3■□□□□ 0.04
SHKBP1-223ENST00000600552 SEC14L2O76054 403 aa15.3■□□□□ 0.04
SHKBP1-223ENST00000600552 CELA3BP08861 270 aa15.3■□□□□ 0.04
SHKBP1-223ENST00000600552 CECR9P0C854 216 aa15.3■□□□□ 0.04
SHKBP1-223ENST00000600552 FAM157CP0CG43 387 aa15.3■□□□□ 0.04
SHKBP1-223ENST00000600552 NPRL3Q12980 569 aa15.3■□□□□ 0.04
SHKBP1-223ENST00000600552 RGNQ15493 299 aa15.3■□□□□ 0.04
SHKBP1-223ENST00000600552 ZSWIM7Q19AV6 140 aa15.3■□□□□ 0.04
SHKBP1-223ENST00000600552 MALRD1Q5VYJ5 2156 aa15.3■□□□□ 0.04
SHKBP1-223ENST00000600552 GPR137CQ8N3F9 429 aa15.3■□□□□ 0.04
SHKBP1-223ENST00000600552 MFSD8Q8NHS3 518 aa15.3■□□□□ 0.04
SHKBP1-223ENST00000600552 NFKBIDQ8NI38 313 aa15.3■□□□□ 0.04
SHKBP1-223ENST00000600552 PAIP1Q9H074 479 aaKnown RBP15.3■□□□□ 0.04
SHKBP1-223ENST00000600552 PIF1Q9H611 641 aa15.3■□□□□ 0.04
SHKBP1-223ENST00000600552 OBP2BQ9NPH6 170 aa15.3■□□□□ 0.04
SHKBP1-223ENST00000600552 THUMPD1Q9NXG2 353 aaKnown RBP15.3■□□□□ 0.04
SHKBP1-223ENST00000600552 FBN3Q75N90 2809 aa15.3■□□□□ 0.04
SHKBP1-223ENST00000600552 SH3PXD2BA1X283 911 aa15.29■□□□□ 0.04
SHKBP1-223ENST00000600552 OR6C65A6NJZ3 312 aa15.29■□□□□ 0.04
SHKBP1-223ENST00000600552 SLC43A1O75387 559 aa15.29■□□□□ 0.04
SHKBP1-223ENST00000600552 CALCRP30988 508 aa15.29■□□□□ 0.04
SHKBP1-223ENST00000600552 IDH3GP51553 393 aaPredicted RBP15.29■□□□□ 0.04
SHKBP1-223ENST00000600552 STX1BP61266 288 aa15.29■□□□□ 0.04
SHKBP1-223ENST00000600552 SRSF2Q01130 221 aaKnown RBP15.29■□□□□ 0.04
SHKBP1-223ENST00000600552 NAAAQ02083 359 aa15.29■□□□□ 0.04
SHKBP1-223ENST00000600552 MSANTD1Q6ZTZ1 278 aa15.29■□□□□ 0.04
SHKBP1-223ENST00000600552 BBS10Q8TAM1 723 aa15.29■□□□□ 0.04
SHKBP1-223ENST00000600552 GTF2H4Q92759 462 aa15.29■□□□□ 0.04
SHKBP1-223ENST00000600552 TAAR8Q969N4 342 aa15.29■□□□□ 0.04
SHKBP1-223ENST00000600552 MAELQ96JY0 434 aaKnown RBP15.29■□□□□ 0.04
SHKBP1-223ENST00000600552 OXGR1Q96P68 337 aa15.29■□□□□ 0.04
SHKBP1-223ENST00000600552 KATNB1Q9BVA0 655 aa15.29■□□□□ 0.04
SHKBP1-223ENST00000600552 PTDSS2Q9BVG9 487 aa15.29■□□□□ 0.04
SHKBP1-223ENST00000600552 RAD21L1Q9H4I0 556 aa15.29■□□□□ 0.04
SHKBP1-223ENST00000600552 USH1CQ9Y6N9 552 aa15.29■□□□□ 0.04
SHKBP1-223ENST00000600552 B9A039 149 aa15.28■□□□□ 0.04
SHKBP1-223ENST00000600552 M0R082 166 aa15.28■□□□□ 0.04
SHKBP1-223ENST00000600552 M0R3G1 203 aa15.28■□□□□ 0.04
SHKBP1-223ENST00000600552 NPIPB7O75200 414 aa15.28■□□□□ 0.04
SHKBP1-223ENST00000600552 APEHP13798 732 aaKnown RBP15.28■□□□□ 0.04
SHKBP1-223ENST00000600552 GRPRP30550 384 aa15.28■□□□□ 0.04
SHKBP1-223ENST00000600552 THBS4P35443 961 aa15.28■□□□□ 0.04
SHKBP1-223ENST00000600552 NR4A2P43354 598 aa15.28■□□□□ 0.04
SHKBP1-223ENST00000600552 GZMKP49863 264 aa15.28■□□□□ 0.04
SHKBP1-223ENST00000600552 EGR4Q05215 589 aa15.28■□□□□ 0.04
SHKBP1-223ENST00000600552 CEACAM16Q2WEN9 425 aa15.28■□□□□ 0.04
SHKBP1-223ENST00000600552 GCNT6Q5T4J0 391 aa15.28■□□□□ 0.04
SHKBP1-223ENST00000600552 ZCCHC24Q8N2G6 241 aaKnown RBP15.28■□□□□ 0.04
SHKBP1-223ENST00000600552 C10orf53Q8N6V4 93 aa15.28■□□□□ 0.04
SHKBP1-223ENST00000600552 GOLGA6L1Q8N7Z2 621 aa15.28■□□□□ 0.04
SHKBP1-223ENST00000600552 ZNF417Q8TAU3 575 aa15.28■□□□□ 0.04
SHKBP1-223ENST00000600552 ZNF587Q96SQ5 575 aaPredicted RBP15.28■□□□□ 0.04
SHKBP1-223ENST00000600552 GPR35Q9HC97 309 aa15.28■□□□□ 0.04
SHKBP1-223ENST00000600552 A4GALTQ9NPC4 353 aa15.28■□□□□ 0.04
SHKBP1-223ENST00000600552 SELENONQ9NZV5 590 aa15.28■□□□□ 0.04
SHKBP1-223ENST00000600552 KCNS2Q9ULS6 477 aa15.28■□□□□ 0.04
SHKBP1-223ENST00000600552 STAB1Q9NY15 2570 aa15.28■□□□□ 0.04
SHKBP1-223ENST00000600552 IGHV4-61A0A0C4DH41 118 aa15.27■□□□□ 0.04
SHKBP1-223ENST00000600552 A0A1B0GWA3 101 aa15.27■□□□□ 0.04
SHKBP1-223ENST00000600552 FTCDNL1E5RQL4 147 aa15.27■□□□□ 0.04
SHKBP1-223ENST00000600552 AIM2O14862 343 aa15.27■□□□□ 0.04
SHKBP1-223ENST00000600552 SERPINI2O75830 405 aa15.27■□□□□ 0.04
SHKBP1-223ENST00000600552 NQO1P15559 274 aaKnown RBP15.27■□□□□ 0.04
SHKBP1-223ENST00000600552 ADIPOQQ15848 244 aa15.27■□□□□ 0.04
SHKBP1-223ENST00000600552 SPATA21Q7Z572 469 aa15.27■□□□□ 0.04
SHKBP1-223ENST00000600552 MYPOPQ86VE0 399 aaPredicted RBP15.27■□□□□ 0.04
SHKBP1-223ENST00000600552 SVOPLQ8N434 492 aa15.27■□□□□ 0.04
SHKBP1-223ENST00000600552 SLC38A4Q969I6 547 aa15.27■□□□□ 0.04
SHKBP1-223ENST00000600552 ZNF837Q96EG3 531 aaPredicted RBP15.27■□□□□ 0.04
SHKBP1-223ENST00000600552 LINC00470Q9BZP3 86 aa15.27■□□□□ 0.04
SHKBP1-223ENST00000600552 NELFAQ9H3P2 528 aa15.27■□□□□ 0.04
SHKBP1-223ENST00000600552 CRLF2Q9HC73 371 aa15.27■□□□□ 0.04
SHKBP1-223ENST00000600552 BCL2L10Q9HD36 194 aa15.27■□□□□ 0.04
SHKBP1-223ENST00000600552 ARPC4-TTLL3A0A0A6YYG9 625 aa15.26■□□□□ 0.03
SHKBP1-223ENST00000600552 SLC35F4A4IF30 521 aa15.26■□□□□ 0.03
SHKBP1-223ENST00000600552 VSTM5A8MXK1 200 aa15.26■□□□□ 0.03
SHKBP1-223ENST00000600552 hCG_2039718K7EN88 272 aa15.26■□□□□ 0.03
SHKBP1-223ENST00000600552 TPST1O60507 370 aa15.26■□□□□ 0.03
SHKBP1-223ENST00000600552 TGFAP01135 160 aa15.26■□□□□ 0.03
SHKBP1-223ENST00000600552 SRD5A1P18405 259 aa15.26■□□□□ 0.03
SHKBP1-223ENST00000600552 IGFBP5P24593 272 aa15.26■□□□□ 0.03
SHKBP1-223ENST00000600552 HTR2AP28223 471 aa15.26■□□□□ 0.03
SHKBP1-223ENST00000600552 AQP1P29972 269 aa15.26■□□□□ 0.03
SHKBP1-223ENST00000600552 SH3BGRP55822 239 aaPredicted RBP15.26■□□□□ 0.03
SHKBP1-223ENST00000600552 NCALDP61601 193 aa15.26■□□□□ 0.03
SHKBP1-223ENST00000600552 HGFACQ04756 655 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms