RNA–Protein interactions for RNA: ENST00000600453.1

IRF3-226, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-226ENST00000600453 MMEL1Q495T6 779 aa13.73□□□□□ -0.21
IRF3-226ENST00000600453 HSP90B2PQ58FF3 399 aa13.73□□□□□ -0.21
IRF3-226ENST00000600453 COQ5Q5HYK3 327 aa13.73□□□□□ -0.21
IRF3-226ENST00000600453 C9orf135Q5VTT2 229 aa13.73□□□□□ -0.21
IRF3-226ENST00000600453 HMBOX1Q6NT76 420 aa13.73□□□□□ -0.21
IRF3-226ENST00000600453 NIPAL3Q6P499 406 aa13.73□□□□□ -0.21
IRF3-226ENST00000600453 EPHX4Q8IUS5 362 aa13.73□□□□□ -0.21
IRF3-226ENST00000600453 FBXL14Q8N1E6 418 aa13.73□□□□□ -0.21
IRF3-226ENST00000600453 WDR31Q8NA23 367 aa13.73□□□□□ -0.21
IRF3-226ENST00000600453 ADPRHL1Q8NDY3 354 aa13.73□□□□□ -0.21
IRF3-226ENST00000600453 NEUROG1Q92886 237 aa13.73□□□□□ -0.21
IRF3-226ENST00000600453 TAAR8Q969N4 342 aa13.73□□□□□ -0.21
IRF3-226ENST00000600453 COX4I2Q96KJ9 171 aa13.73□□□□□ -0.21
IRF3-226ENST00000600453 DHRS9Q9BPW9 319 aa13.73□□□□□ -0.21
IRF3-226ENST00000600453 PTDSS2Q9BVG9 487 aa13.73□□□□□ -0.21
IRF3-226ENST00000600453 TMEM120AQ9BXJ8 343 aa13.73□□□□□ -0.21
IRF3-226ENST00000600453 KAT8Q9H7Z6 458 aaKnown RBP13.73□□□□□ -0.21
IRF3-226ENST00000600453 BARX1Q9HBU1 254 aaPredicted RBP13.73□□□□□ -0.21
IRF3-226ENST00000600453 A0A0B4J2E0 115 aa13.72□□□□□ -0.21
IRF3-226ENST00000600453 A0A1B0GX12 115 aa13.72□□□□□ -0.21
IRF3-226ENST00000600453 A0A1W2PR80 420 aa13.72□□□□□ -0.21
IRF3-226ENST00000600453 H7C1Q1 480 aa13.72□□□□□ -0.21
IRF3-226ENST00000600453 SLC43A1O75387 559 aa13.72□□□□□ -0.21
IRF3-226ENST00000600453 HTR2AP28223 471 aa13.72□□□□□ -0.21
IRF3-226ENST00000600453 TTKP33981 857 aa13.72□□□□□ -0.21
IRF3-226ENST00000600453 SELENOPP49908 381 aa13.72□□□□□ -0.21
IRF3-226ENST00000600453 FOXG1P55316 489 aaPredicted RBP13.72□□□□□ -0.21
IRF3-226ENST00000600453 CLDN17P56750 224 aa13.72□□□□□ -0.21
IRF3-226ENST00000600453 MTPNP58546 118 aa13.72□□□□□ -0.21
IRF3-226ENST00000600453 UBE2NP61088 152 aaKnown RBP13.72□□□□□ -0.21
IRF3-226ENST00000600453 DMTNQ08495 405 aa13.72□□□□□ -0.21
IRF3-226ENST00000600453 NRF1Q16656 503 aa13.72□□□□□ -0.21
IRF3-226ENST00000600453 PGGHGQ32M88 737 aa13.72□□□□□ -0.21
IRF3-226ENST00000600453 KRTAP21-3Q3LHN1 58 aa13.72□□□□□ -0.21
IRF3-226ENST00000600453 GLIPR1L2Q4G1C9 344 aa13.72□□□□□ -0.21
IRF3-226ENST00000600453 ZNF544Q6NX49 715 aa13.72□□□□□ -0.21
IRF3-226ENST00000600453 ZNF613Q6PF04 617 aa13.72□□□□□ -0.21
IRF3-226ENST00000600453 DTX2Q86UW9 622 aa13.72□□□□□ -0.21
IRF3-226ENST00000600453 RETREG3Q86VR2 466 aa13.72□□□□□ -0.21
IRF3-226ENST00000600453 PTOV1Q86YD1 416 aa13.72□□□□□ -0.21
IRF3-226ENST00000600453 OR10A6Q8NH74 314 aa13.72□□□□□ -0.21
IRF3-226ENST00000600453 ADAD1Q96M93 576 aaKnown RBP13.72□□□□□ -0.21
IRF3-226ENST00000600453 ECSITQ9BQ95 431 aa13.72□□□□□ -0.21
IRF3-226ENST00000600453 TMEM43Q9BTV4 400 aa13.72□□□□□ -0.21
IRF3-226ENST00000600453 TRAF4Q9BUZ4 470 aaPredicted RBP13.72□□□□□ -0.21
IRF3-226ENST00000600453 ASPNQ9BXN1 380 aa13.72□□□□□ -0.21
IRF3-226ENST00000600453 NIPBLQ6KC79 2804 aaeCLIP13.72□□□□□ -0.211e-8■□□□□ 8.7
IRF3-226ENST00000600453 ZFHX3Q15911 3703 aa13.71□□□□□ -0.21
IRF3-226ENST00000600453 BBIP1A8MTZ0 92 aa13.71□□□□□ -0.21
IRF3-226ENST00000600453 RPL36A-HNRNPH2H7BZ11 118 aa13.71□□□□□ -0.21
IRF3-226ENST00000600453 MT-ATP6P00846 226 aa13.71□□□□□ -0.21
IRF3-226ENST00000600453 HEXAP06865 529 aa13.71□□□□□ -0.21
IRF3-226ENST00000600453 NQO1P15559 274 aaKnown RBP13.71□□□□□ -0.21
IRF3-226ENST00000600453 CDH2P19022 906 aaPredicted RBP13.71□□□□□ -0.21
IRF3-226ENST00000600453 GRPRP30550 384 aa13.71□□□□□ -0.21
IRF3-226ENST00000600453 IL1RL1Q01638 556 aa13.71□□□□□ -0.21
IRF3-226ENST00000600453 LTBQ06643 244 aa13.71□□□□□ -0.21
IRF3-226ENST00000600453 TRMT5Q32P41 509 aaKnown RBP13.71□□□□□ -0.21
IRF3-226ENST00000600453 NANOGP8Q6NSW7 305 aa13.71□□□□□ -0.21
IRF3-226ENST00000600453 ANKRD16Q6P6B7 361 aa13.71□□□□□ -0.21
IRF3-226ENST00000600453 CCDC36Q8IYA8 594 aa13.71□□□□□ -0.21
IRF3-226ENST00000600453 KDM8Q8N371 416 aa13.71□□□□□ -0.21
IRF3-226ENST00000600453 GPR137CQ8N3F9 429 aa13.71□□□□□ -0.21
IRF3-226ENST00000600453 SCAIQ8N9R8 606 aa13.71□□□□□ -0.21
IRF3-226ENST00000600453 SMYD1Q8NB12 490 aa13.71□□□□□ -0.21
IRF3-226ENST00000600453 PCYOX1LQ8NBM8 494 aa13.71□□□□□ -0.21
IRF3-226ENST00000600453 PIK3C3Q8NEB9 887 aa13.71□□□□□ -0.21
IRF3-226ENST00000600453 MAGEE2Q8TD90 523 aaPredicted RBP13.71□□□□□ -0.21
IRF3-226ENST00000600453 HS6ST2Q96MM7 605 aa13.71□□□□□ -0.21
IRF3-226ENST00000600453 MCHR1Q99705 422 aa13.71□□□□□ -0.21
IRF3-226ENST00000600453 KCNS3Q9BQ31 491 aa13.71□□□□□ -0.21
IRF3-226ENST00000600453 C1QTNF6Q9BXI9 259 aa13.71□□□□□ -0.21
IRF3-226ENST00000600453 RSPO3Q9BXY4 272 aaPredicted RBP13.71□□□□□ -0.21
IRF3-226ENST00000600453 NANOGQ9H9S0 305 aa13.71□□□□□ -0.21
IRF3-226ENST00000600453 CBLN4Q9NTU7 201 aa13.71□□□□□ -0.21
IRF3-226ENST00000600453 ZNF469Q96JG9 3925 aaPredicted RBP13.7□□□□□ -0.22
IRF3-226ENST00000600453 E7EQL1 145 aa13.7□□□□□ -0.22
IRF3-226ENST00000600453 M0R082 166 aa13.7□□□□□ -0.22
IRF3-226ENST00000600453 IFNA14P01570 189 aa13.7□□□□□ -0.22
IRF3-226ENST00000600453 PCGF2P35227 344 aa13.7□□□□□ -0.22
IRF3-226ENST00000600453 FABP6P51161 128 aa13.7□□□□□ -0.22
IRF3-226ENST00000600453 CDH12P55289 794 aa13.7□□□□□ -0.22
IRF3-226ENST00000600453 CHRNB3Q05901 458 aa13.7□□□□□ -0.22
IRF3-226ENST00000600453 DUSP7Q16829 419 aa13.7□□□□□ -0.22
IRF3-226ENST00000600453 CLEC12BQ2HXU8 276 aa13.7□□□□□ -0.22
IRF3-226ENST00000600453 VMACQ2NL98 169 aa13.7□□□□□ -0.22
IRF3-226ENST00000600453 C3orf36Q3SXR2 165 aa13.7□□□□□ -0.22
IRF3-226ENST00000600453 ERICH5Q6P6B1 374 aa13.7□□□□□ -0.22
IRF3-226ENST00000600453 SNX32Q86XE0 403 aa13.7□□□□□ -0.22
IRF3-226ENST00000600453 UEVLDQ8IX04 471 aa13.7□□□□□ -0.22
IRF3-226ENST00000600453 MUC15Q8N387 334 aa13.7□□□□□ -0.22
IRF3-226ENST00000600453 C10orf53Q8N6V4 93 aa13.7□□□□□ -0.22
IRF3-226ENST00000600453 FAM169BQ8N8A8 192 aa13.7□□□□□ -0.22
IRF3-226ENST00000600453 OR8J3Q8NGG0 315 aa13.7□□□□□ -0.22
IRF3-226ENST00000600453 OR1K1Q8NGR3 316 aa13.7□□□□□ -0.22
IRF3-226ENST00000600453 ZNF417Q8TAU3 575 aa13.7□□□□□ -0.22
IRF3-226ENST00000600453 LRRC58Q96CX6 371 aa13.7□□□□□ -0.22
IRF3-226ENST00000600453 SLC41A3Q96GZ6 507 aa13.7□□□□□ -0.22
IRF3-226ENST00000600453 ZNF587Q96SQ5 575 aaPredicted RBP13.7□□□□□ -0.22
IRF3-226ENST00000600453 ARHGDIGQ99819 225 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms