RNA–Protein interactions for RNA: ENST00000598471.1

UPF1-206, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-206ENST00000598471 GXYLT1Q4G148 440 aa13.87□□□□□ -0.19
UPF1-206ENST00000598471 ACSM5Q6NUN0 579 aa13.87□□□□□ -0.19
UPF1-206ENST00000598471 PAQR6Q6TCH4 344 aa13.87□□□□□ -0.19
UPF1-206ENST00000598471 TRILQ7L0X0 811 aa13.87□□□□□ -0.19
UPF1-206ENST00000598471 GGNQ86UU5 652 aa13.87□□□□□ -0.19
UPF1-206ENST00000598471 OR8J1Q8NGP2 316 aa13.87□□□□□ -0.19
UPF1-206ENST00000598471 OR4Q3Q8NH05 313 aa13.87□□□□□ -0.19
UPF1-206ENST00000598471 ERMAPQ96PL5 475 aaPredicted RBP13.87□□□□□ -0.19
UPF1-206ENST00000598471 KATNB1Q9BVA0 655 aa13.87□□□□□ -0.19
UPF1-206ENST00000598471 POLDIP3Q9BY77 421 aaKnown RBP13.87□□□□□ -0.19
UPF1-206ENST00000598471 ZNF71Q9NQZ8 489 aaPredicted RBP13.87□□□□□ -0.19
UPF1-206ENST00000598471 PAQR5Q9NXK6 330 aaPredicted RBP13.87□□□□□ -0.19
UPF1-206ENST00000598471 RALYQ9UKM9 306 aaKnown RBP13.87□□□□□ -0.19
UPF1-206ENST00000598471 PTPRQQ9UMZ3 2332 aa13.86□□□□□ -0.19
UPF1-206ENST00000598471 TNRC6AQ8NDV7 1962 aaKnown RBP13.86□□□□□ -0.19
UPF1-206ENST00000598471 A0A1W2PNV4 684 aa13.86□□□□□ -0.19
UPF1-206ENST00000598471 A0A1W2PRG6 482 aa13.86□□□□□ -0.19
UPF1-206ENST00000598471 RIIAD1A6NNX1 92 aa13.86□□□□□ -0.19
UPF1-206ENST00000598471 M0R3G1 203 aa13.86□□□□□ -0.19
UPF1-206ENST00000598471 IMPA2O14732 288 aa13.86□□□□□ -0.19
UPF1-206ENST00000598471 ARPC3O15145 178 aa13.86□□□□□ -0.19
UPF1-206ENST00000598471 AKR7A3O95154 331 aa13.86□□□□□ -0.19
UPF1-206ENST00000598471 SFTPCP11686 197 aa13.86□□□□□ -0.19
UPF1-206ENST00000598471 EIF1AXP47813 144 aaKnown RBP13.86□□□□□ -0.19
UPF1-206ENST00000598471 CLDN20P56880 219 aa13.86□□□□□ -0.19
UPF1-206ENST00000598471 CARD18P57730 90 aa13.86□□□□□ -0.19
UPF1-206ENST00000598471 RAC3P60763 192 aa13.86□□□□□ -0.19
UPF1-206ENST00000598471 ISL1P61371 349 aa13.86□□□□□ -0.19
UPF1-206ENST00000598471 TEKQ02763 1124 aa13.86□□□□□ -0.19
UPF1-206ENST00000598471 MAD2L1BPQ15013 274 aaPredicted RBP13.86□□□□□ -0.19
UPF1-206ENST00000598471 PLEKHN1Q494U1 663 aaPredicted RBP13.86□□□□□ -0.19
UPF1-206ENST00000598471 GPR139Q6DWJ6 353 aa13.86□□□□□ -0.19
UPF1-206ENST00000598471 FAM180AQ6UWF9 173 aa13.86□□□□□ -0.19
UPF1-206ENST00000598471 IGFN1Q86VF2 1251 aa13.86□□□□□ -0.19
UPF1-206ENST00000598471 ENTHD1Q8IYW4 607 aa13.86□□□□□ -0.19
UPF1-206ENST00000598471 ANKK1Q8NFD2 765 aa13.86□□□□□ -0.19
UPF1-206ENST00000598471 CPNE4Q96A23 557 aaPredicted RBP13.86□□□□□ -0.19
UPF1-206ENST00000598471 Q96MT0 163 aa13.86□□□□□ -0.19
UPF1-206ENST00000598471 NR1H4Q96RI1 486 aaPredicted RBP13.86□□□□□ -0.19
UPF1-206ENST00000598471 NRIP3Q9NQ35 241 aa13.86□□□□□ -0.19
UPF1-206ENST00000598471 CLN6Q9NWW5 311 aa13.86□□□□□ -0.19
UPF1-206ENST00000598471 TAS2R5Q9NYW4 299 aa13.86□□□□□ -0.19
UPF1-206ENST00000598471 KLHL21Q9UJP4 597 aa13.86□□□□□ -0.19
UPF1-206ENST00000598471 RNF6Q9Y252 685 aa13.86□□□□□ -0.19
UPF1-206ENST00000598471 RASD1Q9Y272 281 aa13.86□□□□□ -0.19
UPF1-206ENST00000598471 IER3IP1Q9Y5U9 82 aa13.86□□□□□ -0.19
UPF1-206ENST00000598471 LIPGQ9Y5X9 500 aa13.86□□□□□ -0.19
UPF1-206ENST00000598471 USP24Q9UPU5 2620 aa13.86□□□□□ -0.19
UPF1-206ENST00000598471 ZZEF1O43149 2961 aa13.85□□□□□ -0.19
UPF1-206ENST00000598471 AQP7P3A6NL99 342 aa13.85□□□□□ -0.19
UPF1-206ENST00000598471 C11orf98E9PRG8 122 aa13.85□□□□□ -0.19
UPF1-206ENST00000598471 SURF4O15260 269 aa13.85□□□□□ -0.19
UPF1-206ENST00000598471 VAMP5O95183 116 aa13.85□□□□□ -0.19
UPF1-206ENST00000598471 F13BP05160 661 aa13.85□□□□□ -0.19
UPF1-206ENST00000598471 ZNF708P17019 499 aa13.85□□□□□ -0.19
UPF1-206ENST00000598471 ZNF3P17036 446 aa13.85□□□□□ -0.19
UPF1-206ENST00000598471 ENPP1P22413 925 aa13.85□□□□□ -0.19
UPF1-206ENST00000598471 DAP3P51398 398 aaKnown RBP13.85□□□□□ -0.19
UPF1-206ENST00000598471 CHN2P52757 468 aa13.85□□□□□ -0.19
UPF1-206ENST00000598471 SNRPGP62308 76 aaKnown RBP13.85□□□□□ -0.19
UPF1-206ENST00000598471 ERVK-25P63136 954 aa13.85□□□□□ -0.19
UPF1-206ENST00000598471 CD47Q08722 323 aa13.85□□□□□ -0.19
UPF1-206ENST00000598471 C19orf57Q0VDD7 668 aa13.85□□□□□ -0.19
UPF1-206ENST00000598471 TOP3AQ13472 1001 aaPredicted RBP13.85□□□□□ -0.19
UPF1-206ENST00000598471 ZNF239Q16600 458 aaKnown RBP13.85□□□□□ -0.19
UPF1-206ENST00000598471 CTU2Q2VPK5 515 aaKnown RBP13.85□□□□□ -0.19
UPF1-206ENST00000598471 EMC4Q5J8M3 183 aa13.85□□□□□ -0.19
UPF1-206ENST00000598471 VASNQ6EMK4 673 aa13.85□□□□□ -0.19
UPF1-206ENST00000598471 CHMP1BQ7LBR1 199 aa13.85□□□□□ -0.19
UPF1-206ENST00000598471 CCDC71Q8IV32 467 aaPredicted RBP13.85□□□□□ -0.19
UPF1-206ENST00000598471 TMEM99Q8N816 258 aa13.85□□□□□ -0.19
UPF1-206ENST00000598471 TCEANCQ8N8B7 351 aa13.85□□□□□ -0.19
UPF1-206ENST00000598471 LRRC75AQ8NAA5 344 aa13.85□□□□□ -0.19
UPF1-206ENST00000598471 OR10D3Q8NH80 312 aa13.85□□□□□ -0.19
UPF1-206ENST00000598471 RHOXF1Q8NHV9 184 aa13.85□□□□□ -0.19
UPF1-206ENST00000598471 TMEM163Q8TC26 289 aa13.85□□□□□ -0.19
UPF1-206ENST00000598471 ADGRG7Q96K78 797 aa13.85□□□□□ -0.19
UPF1-206ENST00000598471 TAAR6Q96RI8 345 aa13.85□□□□□ -0.19
UPF1-206ENST00000598471 ENKD1Q9H0I2 346 aa13.85□□□□□ -0.19
UPF1-206ENST00000598471 FN3KQ9H479 309 aa13.85□□□□□ -0.19
UPF1-206ENST00000598471 FANCFQ9NPI8 374 aa13.85□□□□□ -0.19
UPF1-206ENST00000598471 CMC2Q9NRP2 79 aa13.85□□□□□ -0.19
UPF1-206ENST00000598471 RASSF1Q9NS23 344 aa13.85□□□□□ -0.19
UPF1-206ENST00000598471 UBAP1Q9NZ09 502 aa13.85□□□□□ -0.19
UPF1-206ENST00000598471 GRHPRQ9UBQ7 328 aa13.85□□□□□ -0.19
UPF1-206ENST00000598471 SEC14L4Q9UDX3 406 aa13.85□□□□□ -0.19
UPF1-206ENST00000598471 ANKRD11Q6UB99 2663 aaPredicted RBP13.85□□□□□ -0.19
UPF1-206ENST00000598471 MPDZO75970 2070 aa13.84□□□□□ -0.19
UPF1-206ENST00000598471 NCKAP5O14513 1909 aa13.84□□□□□ -0.19
UPF1-206ENST00000598471 A0A1B0GVC2 190 aa13.84□□□□□ -0.19
UPF1-206ENST00000598471 NPIPB13A6NJU9 1138 aa13.84□□□□□ -0.19
UPF1-206ENST00000598471 NPIPB4C9JG80 1138 aa13.84□□□□□ -0.19
UPF1-206ENST00000598471 NPIPA5E9PKD4 350 aa13.84□□□□□ -0.19
UPF1-206ENST00000598471 AQP7O14520 342 aa13.84□□□□□ -0.19
UPF1-206ENST00000598471 CXCL13O43927 109 aa13.84□□□□□ -0.19
UPF1-206ENST00000598471 SERPINI2O75830 405 aa13.84□□□□□ -0.19
UPF1-206ENST00000598471 SYNGR4O95473 234 aa13.84□□□□□ -0.19
UPF1-206ENST00000598471 PAICSP22234 425 aaKnown RBP13.84□□□□□ -0.19
UPF1-206ENST00000598471 SDHAP31040 664 aa13.84□□□□□ -0.19
UPF1-206ENST00000598471 AGFG1P52594 562 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms