RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 CECR9P0C854 216 aa14.78□□□□□ -0.04
PNKP-210ENST00000597965 DAOP14920 347 aa14.78□□□□□ -0.04
PNKP-210ENST00000597965 CREB1P16220 341 aa14.78□□□□□ -0.04
PNKP-210ENST00000597965 ZNF43P17038 809 aa14.78□□□□□ -0.04
PNKP-210ENST00000597965 NPR2P20594 1047 aa14.78□□□□□ -0.04
PNKP-210ENST00000597965 ARR3P36575 388 aa14.78□□□□□ -0.04
PNKP-210ENST00000597965 MDH1P40925 334 aaKnown RBP14.78□□□□□ -0.04
PNKP-210ENST00000597965 SELENOPP49908 381 aa14.78□□□□□ -0.04
PNKP-210ENST00000597965 VHLLQ6RSH7 139 aa14.78□□□□□ -0.04
PNKP-210ENST00000597965 ANKS4BQ8N8V4 417 aa14.78□□□□□ -0.04
PNKP-210ENST00000597965 MFSD8Q8NHS3 518 aa14.78□□□□□ -0.04
PNKP-210ENST00000597965 SLC35B4Q969S0 331 aa14.78□□□□□ -0.04
PNKP-210ENST00000597965 AIG1Q9NVV5 245 aa14.78□□□□□ -0.04
PNKP-210ENST00000597965 DSPPQ9NZW4 1301 aa14.77□□□□□ -0.04
PNKP-210ENST00000597965 RPL36A-HNRNPH2H7BZ11 118 aa14.77□□□□□ -0.05
PNKP-210ENST00000597965 FRS3O43559 492 aa14.77□□□□□ -0.05
PNKP-210ENST00000597965 TCF21O43680 179 aa14.77□□□□□ -0.05
PNKP-210ENST00000597965 AKAP8O43823 692 aaKnown RBP14.77□□□□□ -0.05
PNKP-210ENST00000597965 SLC43A1O75387 559 aa14.77□□□□□ -0.05
PNKP-210ENST00000597965 ANP32DO95626 131 aa14.77□□□□□ -0.05
PNKP-210ENST00000597965 STAMBPO95630 424 aa14.77□□□□□ -0.05
PNKP-210ENST00000597965 GKN3PP0CG01 181 aa14.77□□□□□ -0.05
PNKP-210ENST00000597965 CBR1P16152 277 aa14.77□□□□□ -0.05
PNKP-210ENST00000597965 ACAA2P42765 397 aaKnown RBP14.77□□□□□ -0.05
PNKP-210ENST00000597965 UFM1P61960 85 aa14.77□□□□□ -0.05
PNKP-210ENST00000597965 ROR2Q01974 943 aaKnown RBP14.77□□□□□ -0.05
PNKP-210ENST00000597965 STX3Q13277 289 aa14.77□□□□□ -0.05
PNKP-210ENST00000597965 CR1LQ2VPA4 569 aa14.77□□□□□ -0.05
PNKP-210ENST00000597965 C5orf46Q6UWT4 87 aa14.77□□□□□ -0.05
PNKP-210ENST00000597965 ZNF836Q6ZNA1 936 aa14.77□□□□□ -0.05
PNKP-210ENST00000597965 GPR137CQ8N3F9 429 aa14.77□□□□□ -0.05
PNKP-210ENST00000597965 LINC01356Q8N9X3 169 aa14.77□□□□□ -0.05
PNKP-210ENST00000597965 PNPT1Q8TCS8 783 aaKnown RBP14.77□□□□□ -0.05
PNKP-210ENST00000597965 SORT1Q99523 831 aa14.77□□□□□ -0.05
PNKP-210ENST00000597965 RMND5AQ9H871 391 aa14.77□□□□□ -0.05
PNKP-210ENST00000597965 ZNF443Q9Y2A4 671 aaPredicted RBP14.77□□□□□ -0.05
PNKP-210ENST00000597965 A0A096LPE4 126 aa14.76□□□□□ -0.05
PNKP-210ENST00000597965 A0A0G2JPF8 293 aa14.76□□□□□ -0.05
PNKP-210ENST00000597965 A0A1W2PPZ6 126 aa14.76□□□□□ -0.05
PNKP-210ENST00000597965 TRPC5OSA6NMA1 111 aa14.76□□□□□ -0.05
PNKP-210ENST00000597965 HNRNPCL2B2RXH8 293 aa14.76□□□□□ -0.05
PNKP-210ENST00000597965 HNRNPCL3B7ZW38 293 aa14.76□□□□□ -0.05
PNKP-210ENST00000597965 hCG_2039718K7EN88 272 aa14.76□□□□□ -0.05
PNKP-210ENST00000597965 OR2T1O43869 369 aa14.76□□□□□ -0.05
PNKP-210ENST00000597965 HNRNPCL1O60812 293 aaKnown RBP14.76□□□□□ -0.05
PNKP-210ENST00000597965 GSNP06396 782 aa14.76□□□□□ -0.05
PNKP-210ENST00000597965 TACSTD2P09758 323 aa14.76□□□□□ -0.05
PNKP-210ENST00000597965 HNRNPCL4P0DMR1 293 aa14.76□□□□□ -0.05
PNKP-210ENST00000597965 SRP14P37108 136 aaKnown RBP14.76□□□□□ -0.05
PNKP-210ENST00000597965 CDKN2CP42773 168 aa14.76□□□□□ -0.05
PNKP-210ENST00000597965 CRATP43155 626 aa14.76□□□□□ -0.05
PNKP-210ENST00000597965 P2RY4P51582 365 aa14.76□□□□□ -0.05
PNKP-210ENST00000597965 NME5P56597 212 aa14.76□□□□□ -0.05
PNKP-210ENST00000597965 DSTNP60981 165 aa14.76□□□□□ -0.05
PNKP-210ENST00000597965 GNGT1P63211 74 aa14.76□□□□□ -0.05
PNKP-210ENST00000597965 POU3F1Q03052 451 aaPredicted RBP14.76□□□□□ -0.05
PNKP-210ENST00000597965 BNIP2Q12982 314 aa14.76□□□□□ -0.05
PNKP-210ENST00000597965 SCGB2A2Q13296 93 aa14.76□□□□□ -0.05
PNKP-210ENST00000597965 COX20Q5RI15 118 aa14.76□□□□□ -0.05
PNKP-210ENST00000597965 IL17RELQ6ZVW7 336 aa14.76□□□□□ -0.05
PNKP-210ENST00000597965 VRK2Q86Y07 508 aa14.76□□□□□ -0.05
PNKP-210ENST00000597965 EPHX4Q8IUS5 362 aa14.76□□□□□ -0.05
PNKP-210ENST00000597965 ZNF786Q8N393 782 aa14.76□□□□□ -0.05
PNKP-210ENST00000597965 TEX37Q96LM6 180 aa14.76□□□□□ -0.05
PNKP-210ENST00000597965 SPATA9Q9BWV2 254 aa14.76□□□□□ -0.05
PNKP-210ENST00000597965 C20orf27Q9GZN8 174 aa14.76□□□□□ -0.05
PNKP-210ENST00000597965 DYNLRB1Q9NP97 96 aa14.76□□□□□ -0.05
PNKP-210ENST00000597965 TMEFF2Q9UIK5 374 aaPredicted RBP14.76□□□□□ -0.05
PNKP-210ENST00000597965 SLCO1B7G3V0H7 640 aa14.75□□□□□ -0.05
PNKP-210ENST00000597965 NPIPB7O75200 414 aa14.75□□□□□ -0.05
PNKP-210ENST00000597965 BCHEP06276 602 aa14.75□□□□□ -0.05
PNKP-210ENST00000597965 ZCCHC18P0CG32 403 aa14.75□□□□□ -0.05
PNKP-210ENST00000597965 IDO1P14902 403 aa14.75□□□□□ -0.05
PNKP-210ENST00000597965 GUCY1A3Q02108 690 aa14.75□□□□□ -0.05
PNKP-210ENST00000597965 C1DQ13901 141 aaKnown RBP14.75□□□□□ -0.05
PNKP-210ENST00000597965 SPATA21Q7Z572 469 aa14.75□□□□□ -0.05
PNKP-210ENST00000597965 PIK3C3Q8NEB9 887 aa14.75□□□□□ -0.05
PNKP-210ENST00000597965 SLC38A5Q8WUX1 472 aa14.75□□□□□ -0.05
PNKP-210ENST00000597965 OXGR1Q96P68 337 aa14.75□□□□□ -0.05
PNKP-210ENST00000597965 C12orf10Q9HB07 376 aa14.75□□□□□ -0.05
PNKP-210ENST00000597965 RPS6KB2Q9UBS0 482 aa14.75□□□□□ -0.05
PNKP-210ENST00000597965 USP22Q9UPT9 525 aa14.75□□□□□ -0.05
PNKP-210ENST00000597965 SPEF1Q9Y4P9 236 aa14.75□□□□□ -0.05
PNKP-210ENST00000597965 TMEM229AB2RXF0 380 aa14.74□□□□□ -0.05
PNKP-210ENST00000597965 NR5A2O00482 541 aa14.74□□□□□ -0.05
PNKP-210ENST00000597965 AIM2O14862 343 aa14.74□□□□□ -0.05
PNKP-210ENST00000597965 UPK3AO75631 287 aa14.74□□□□□ -0.05
PNKP-210ENST00000597965 SLC22A3O75751 556 aa14.74□□□□□ -0.05
PNKP-210ENST00000597965 ALDOCP09972 364 aaKnown RBP14.74□□□□□ -0.05
PNKP-210ENST00000597965 PNMTP11086 282 aa14.74□□□□□ -0.05
PNKP-210ENST00000597965 APEX1P27695 318 aaKnown RBP14.74□□□□□ -0.05
PNKP-210ENST00000597965 EVX1P49640 407 aa14.74□□□□□ -0.05
PNKP-210ENST00000597965 CLDN17P56750 224 aa14.74□□□□□ -0.05
PNKP-210ENST00000597965 MPP2Q14168 576 aa14.74□□□□□ -0.05
PNKP-210ENST00000597965 PDCD4Q53EL6 469 aaKnown RBP14.74□□□□□ -0.05
PNKP-210ENST00000597965 REP15Q6BDI9 236 aa14.74□□□□□ -0.05
PNKP-210ENST00000597965 MSANTD1Q6ZTZ1 278 aa14.74□□□□□ -0.05
PNKP-210ENST00000597965 NET1Q7Z628 596 aaPredicted RBP14.74□□□□□ -0.05
PNKP-210ENST00000597965 SNX32Q86XE0 403 aa14.74□□□□□ -0.05
PNKP-210ENST00000597965 UBASH3BQ8TF42 649 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms