RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 ASPNQ9BXN1 380 aa10.81□□□□□ -0.68
SHKBP1-213ENST00000597325 POTEKPQ9BYX7 375 aa10.81□□□□□ -0.68
SHKBP1-213ENST00000597325 UCK2Q9BZX2 261 aa10.81□□□□□ -0.68
SHKBP1-213ENST00000597325 FKRPQ9H9S5 495 aa10.81□□□□□ -0.68
SHKBP1-213ENST00000597325 MEPEQ9NQ76 525 aaPredicted RBP10.81□□□□□ -0.68
SHKBP1-213ENST00000597325 NANSQ9NR45 359 aa10.81□□□□□ -0.68
SHKBP1-213ENST00000597325 C20orf141Q9NUB4 165 aa10.81□□□□□ -0.68
SHKBP1-213ENST00000597325 NPIPA1Q9UND3 350 aa10.81□□□□□ -0.68
SHKBP1-213ENST00000597325 HDGFL3Q9Y3E1 203 aa10.81□□□□□ -0.68
SHKBP1-213ENST00000597325 ZNF337Q9Y3M9 751 aa10.81□□□□□ -0.68
SHKBP1-213ENST00000597325 LIPGQ9Y5X9 500 aa10.81□□□□□ -0.68
SHKBP1-213ENST00000597325 NCKAP5O14513 1909 aa10.8□□□□□ -0.68
SHKBP1-213ENST00000597325 UNC119BA6NIH7 251 aa10.8□□□□□ -0.68
SHKBP1-213ENST00000597325 EFNA2O43921 213 aa10.8□□□□□ -0.68
SHKBP1-213ENST00000597325 NPIPB7O75200 414 aa10.8□□□□□ -0.68
SHKBP1-213ENST00000597325 IGHG3P01860 377 aa10.8□□□□□ -0.68
SHKBP1-213ENST00000597325 OPN1LWP04000 364 aa10.8□□□□□ -0.68
SHKBP1-213ENST00000597325 ALPLP05186 524 aa10.8□□□□□ -0.68
SHKBP1-213ENST00000597325 MAKP20794 623 aa10.8□□□□□ -0.68
SHKBP1-213ENST00000597325 GSSP48637 474 aa10.8□□□□□ -0.68
SHKBP1-213ENST00000597325 SLC9A3P48764 834 aa10.8□□□□□ -0.68
SHKBP1-213ENST00000597325 DAPP51397 102 aa10.8□□□□□ -0.68
SHKBP1-213ENST00000597325 CSNK2A1P68400 391 aaPredicted RBP10.8□□□□□ -0.68
SHKBP1-213ENST00000597325 LSM11P83369 360 aaKnown RBP eCLIP10.8□□□□□ -0.68
SHKBP1-213ENST00000597325 EGR4Q05215 589 aa10.8□□□□□ -0.68
SHKBP1-213ENST00000597325 COX10Q12887 443 aa10.8□□□□□ -0.68
SHKBP1-213ENST00000597325 MYBPHQ13203 477 aa10.8□□□□□ -0.68
SHKBP1-213ENST00000597325 OR7A5Q15622 319 aa10.8□□□□□ -0.68
SHKBP1-213ENST00000597325 ZNF74Q16587 644 aa10.8□□□□□ -0.68
SHKBP1-213ENST00000597325 CMPK2Q5EBM0 449 aa10.8□□□□□ -0.68
SHKBP1-213ENST00000597325 KDM4DQ6B0I6 523 aa10.8□□□□□ -0.68
SHKBP1-213ENST00000597325 PPP4R4Q6NUP7 873 aa10.8□□□□□ -0.68
SHKBP1-213ENST00000597325 ESPNLQ6ZVH7 1005 aa10.8□□□□□ -0.68
SHKBP1-213ENST00000597325 TMPRSS11FQ6ZWK6 438 aa10.8□□□□□ -0.68
SHKBP1-213ENST00000597325 TRILQ7L0X0 811 aa10.8□□□□□ -0.68
SHKBP1-213ENST00000597325 NANOGNBQ7Z5D8 188 aa10.8□□□□□ -0.68
SHKBP1-213ENST00000597325 ZER1Q7Z7L7 766 aa10.8□□□□□ -0.68
SHKBP1-213ENST00000597325 GALNT5Q7Z7M9 940 aa10.8□□□□□ -0.68
SHKBP1-213ENST00000597325 OAFQ86UD1 273 aa10.8□□□□□ -0.68
SHKBP1-213ENST00000597325 UBQLNLQ8IYU4 475 aa10.8□□□□□ -0.68
SHKBP1-213ENST00000597325 MEIOBQ8N635 442 aa10.8□□□□□ -0.68
SHKBP1-213ENST00000597325 FANK1Q8TC84 345 aa10.8□□□□□ -0.68
SHKBP1-213ENST00000597325 ABTB1Q969K4 478 aaPredicted RBP10.8□□□□□ -0.68
SHKBP1-213ENST00000597325 TAAR8Q969N4 342 aa10.8□□□□□ -0.68
SHKBP1-213ENST00000597325 SLC25A36Q96CQ1 311 aa10.8□□□□□ -0.68
SHKBP1-213ENST00000597325 ZHX1-C8orf76Q96EF9 292 aa10.8□□□□□ -0.68
SHKBP1-213ENST00000597325 DNAJA3Q96EY1 480 aa10.8□□□□□ -0.68
SHKBP1-213ENST00000597325 ARL5BQ96KC2 179 aa10.8□□□□□ -0.68
SHKBP1-213ENST00000597325 ALKBH4Q9NXW9 302 aa10.8□□□□□ -0.68
SHKBP1-213ENST00000597325 SMPD3Q9NY59 655 aaPredicted RBP10.8□□□□□ -0.68
SHKBP1-213ENST00000597325 ZNF229Q9UJW7 825 aa10.8□□□□□ -0.68
SHKBP1-213ENST00000597325 CORINQ9Y5Q5 1042 aa10.8□□□□□ -0.68
SHKBP1-213ENST00000597325 H3BN98 237 aa10.79□□□□□ -0.68
SHKBP1-213ENST00000597325 SULT2B1O00204 365 aa10.79□□□□□ -0.68
SHKBP1-213ENST00000597325 EIF1AYO14602 144 aaKnown RBP10.79□□□□□ -0.68
SHKBP1-213ENST00000597325 TNFSF11O14788 317 aa10.79□□□□□ -0.68
SHKBP1-213ENST00000597325 OR6A2O95222 327 aa10.79□□□□□ -0.68
SHKBP1-213ENST00000597325 PMS2P2O95744 297 aa10.79□□□□□ -0.68
SHKBP1-213ENST00000597325 BGLAPP02818 100 aa10.79□□□□□ -0.68
SHKBP1-213ENST00000597325 HEXAP06865 529 aa10.79□□□□□ -0.68
SHKBP1-213ENST00000597325 BMP7P18075 431 aa10.79□□□□□ -0.68
SHKBP1-213ENST00000597325 SHC1P29353 583 aa10.79□□□□□ -0.68
SHKBP1-213ENST00000597325 HSPA13P48723 471 aa10.79□□□□□ -0.68
SHKBP1-213ENST00000597325 SMSP52788 366 aa10.79□□□□□ -0.68
SHKBP1-213ENST00000597325 OR2B6P58173 313 aa10.79□□□□□ -0.68
SHKBP1-213ENST00000597325 RPS3AP61247 264 aaKnown RBP10.79□□□□□ -0.68
SHKBP1-213ENST00000597325 SLC35A1P78382 337 aa10.79□□□□□ -0.68
SHKBP1-213ENST00000597325 NHSL2Q5HYW2 709 aa10.79□□□□□ -0.68
SHKBP1-213ENST00000597325 HBMQ6B0K9 141 aa10.79□□□□□ -0.68
SHKBP1-213ENST00000597325 RPL13AP3Q6NVV1 102 aa10.79□□□□□ -0.68
SHKBP1-213ENST00000597325 KLHL17Q6TDP4 642 aa10.79□□□□□ -0.68
SHKBP1-213ENST00000597325 IZUMO2Q6UXV1 221 aa10.79□□□□□ -0.68
SHKBP1-213ENST00000597325 SLC46A3Q7Z3Q1 461 aa10.79□□□□□ -0.68
SHKBP1-213ENST00000597325 LSRQ86X29 649 aaPredicted RBP10.79□□□□□ -0.68
SHKBP1-213ENST00000597325 SIAH3Q8IW03 269 aa10.79□□□□□ -0.68
SHKBP1-213ENST00000597325 PARP8Q8N3A8 854 aa10.79□□□□□ -0.68
SHKBP1-213ENST00000597325 OR52L1Q8NGH7 329 aa10.79□□□□□ -0.68
SHKBP1-213ENST00000597325 OR13C2Q8NGS9 318 aa10.79□□□□□ -0.68
SHKBP1-213ENST00000597325 MFSD8Q8NHS3 518 aa10.79□□□□□ -0.68
SHKBP1-213ENST00000597325 TEX47Q8TBZ9 253 aa10.79□□□□□ -0.68
SHKBP1-213ENST00000597325 SARAFQ96BY9 339 aa10.79□□□□□ -0.68
SHKBP1-213ENST00000597325 RDH12Q96NR8 316 aa10.79□□□□□ -0.68
SHKBP1-213ENST00000597325 MOGAT1Q96PD6 335 aa10.79□□□□□ -0.68
SHKBP1-213ENST00000597325 SLC29A1Q99808 456 aa10.79□□□□□ -0.68
SHKBP1-213ENST00000597325 TACO1Q9BSH4 297 aaKnown RBP10.79□□□□□ -0.68
SHKBP1-213ENST00000597325 PTDSS2Q9BVG9 487 aa10.79□□□□□ -0.68
SHKBP1-213ENST00000597325 RIBC2Q9H4K1 309 aa10.79□□□□□ -0.68
SHKBP1-213ENST00000597325 TIGARQ9NQ88 270 aa10.79□□□□□ -0.68
SHKBP1-213ENST00000597325 TBC1D23Q9NUY8 699 aa10.79□□□□□ -0.68
SHKBP1-213ENST00000597325 SH3BGRL2Q9UJC5 107 aa10.79□□□□□ -0.68
SHKBP1-213ENST00000597325 A0A1W2PNR3 127 aa10.78□□□□□ -0.68
SHKBP1-213ENST00000597325 LIPT2A6NK58 231 aa10.78□□□□□ -0.68
SHKBP1-213ENST00000597325 AQP7O14520 342 aa10.78□□□□□ -0.68
SHKBP1-213ENST00000597325 CDC42EP2O14613 210 aa10.78□□□□□ -0.68
SHKBP1-213ENST00000597325 KLF4O43474 513 aa10.78□□□□□ -0.68
SHKBP1-213ENST00000597325 MITFO75030 526 aaPredicted RBP10.78□□□□□ -0.68
SHKBP1-213ENST00000597325 SOX14O95416 240 aa10.78□□□□□ -0.68
SHKBP1-213ENST00000597325 OSMP13725 252 aa10.78□□□□□ -0.68
SHKBP1-213ENST00000597325 ZNF708P17019 499 aa10.78□□□□□ -0.68
SHKBP1-213ENST00000597325 ZNF26P17031 533 aaPredicted RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms