RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 OPN1SWP03999 348 aa15.6■□□□□ 0.09
SHKBP1-204ENST00000594862 GZMMP51124 257 aa15.6■□□□□ 0.09
SHKBP1-204ENST00000594862 FOXD4Q12950 439 aaPredicted RBP15.6■□□□□ 0.09
SHKBP1-204ENST00000594862 C1DQ13901 141 aaKnown RBP15.6■□□□□ 0.09
SHKBP1-204ENST00000594862 DUSP7Q16829 419 aa15.6■□□□□ 0.09
SHKBP1-204ENST00000594862 Q5PR19 223 aa15.6■□□□□ 0.09
SHKBP1-204ENST00000594862 H1FNTQ75WM6 255 aaPredicted RBP15.6■□□□□ 0.09
SHKBP1-204ENST00000594862 CALHM3Q86XJ0 350 aa15.6■□□□□ 0.09
SHKBP1-204ENST00000594862 DEPDC4Q8N2C3 294 aa15.6■□□□□ 0.09
SHKBP1-204ENST00000594862 RP9Q8TA86 221 aaKnown RBP15.6■□□□□ 0.09
SHKBP1-204ENST00000594862 C10orf82Q8WW14 230 aa15.6■□□□□ 0.09
SHKBP1-204ENST00000594862 PROX1Q92786 737 aa15.6■□□□□ 0.09
SHKBP1-204ENST00000594862 TAAR8Q969N4 342 aa15.6■□□□□ 0.09
SHKBP1-204ENST00000594862 TAMM41Q96BW9 452 aa15.6■□□□□ 0.09
SHKBP1-204ENST00000594862 MPP4Q96JB8 637 aa15.6■□□□□ 0.09
SHKBP1-204ENST00000594862 RSPO3Q9BXY4 272 aaPredicted RBP15.6■□□□□ 0.09
SHKBP1-204ENST00000594862 POLR2J2Q9GZM3 115 aaKnown RBP15.6■□□□□ 0.09
SHKBP1-204ENST00000594862 PCDHAC1Q9H158 963 aa15.6■□□□□ 0.09
SHKBP1-204ENST00000594862 POLR2J3Q9H1A7 115 aaKnown RBP15.6■□□□□ 0.09
SHKBP1-204ENST00000594862 SLC25A15Q9Y619 301 aa15.6■□□□□ 0.09
SHKBP1-204ENST00000594862 IGKV1D-42A0A075B6H8 117 aa15.59■□□□□ 0.09
SHKBP1-204ENST00000594862 DPRXA6NFQ7 191 aa15.59■□□□□ 0.09
SHKBP1-204ENST00000594862 M0R082 166 aa15.59■□□□□ 0.09
SHKBP1-204ENST00000594862 M0R3H8 397 aa15.59■□□□□ 0.09
SHKBP1-204ENST00000594862 PLAUP00749 431 aa15.59■□□□□ 0.09
SHKBP1-204ENST00000594862 NQO1P15559 274 aaKnown RBP15.59■□□□□ 0.09
SHKBP1-204ENST00000594862 CD247P20963 164 aa15.59■□□□□ 0.09
SHKBP1-204ENST00000594862 GRPRP30550 384 aa15.59■□□□□ 0.09
SHKBP1-204ENST00000594862 CDH12P55289 794 aa15.59■□□□□ 0.09
SHKBP1-204ENST00000594862 PRPS1P60891 318 aa15.59■□□□□ 0.09
SHKBP1-204ENST00000594862 RPS4XP62701 263 aaKnown RBP15.59■□□□□ 0.09
SHKBP1-204ENST00000594862 KRTAP21-3Q3LHN1 58 aa15.59■□□□□ 0.09
SHKBP1-204ENST00000594862 ZNF672Q499Z4 452 aaPredicted RBP15.59■□□□□ 0.09
SHKBP1-204ENST00000594862 RABL3Q5HYI8 236 aa15.59■□□□□ 0.09
SHKBP1-204ENST00000594862 NIPAL3Q6P499 406 aa15.59■□□□□ 0.09
SHKBP1-204ENST00000594862 EPHX4Q8IUS5 362 aa15.59■□□□□ 0.09
SHKBP1-204ENST00000594862 GPR32P1Q8NGA4 272 aa15.59■□□□□ 0.09
SHKBP1-204ENST00000594862 OR52N5Q8NH56 324 aa15.59■□□□□ 0.09
SHKBP1-204ENST00000594862 ZNF417Q8TAU3 575 aa15.59■□□□□ 0.09
SHKBP1-204ENST00000594862 IGFBPL1Q8WX77 278 aa15.59■□□□□ 0.09
SHKBP1-204ENST00000594862 ZNF587Q96SQ5 575 aaPredicted RBP15.59■□□□□ 0.09
SHKBP1-204ENST00000594862 SLC19A3Q9BZV2 496 aa15.59■□□□□ 0.09
SHKBP1-204ENST00000594862 SLC17A5Q9NRA2 495 aa15.59■□□□□ 0.09
SHKBP1-204ENST00000594862 DSCAMO60469 2012 aa15.59■□□□□ 0.09
SHKBP1-204ENST00000594862 ACANP16112 2415 aa15.59■□□□□ 0.09
SHKBP1-204ENST00000594862 LOC100653049A0A140TA62 436 aa15.58■□□□□ 0.08
SHKBP1-204ENST00000594862 TRAPPC13A5PLN9 417 aa15.58■□□□□ 0.08
SHKBP1-204ENST00000594862 FAM220BPB1ANY3 271 aa15.58■□□□□ 0.08
SHKBP1-204ENST00000594862 NDUFAB1O14561 156 aa15.58■□□□□ 0.08
SHKBP1-204ENST00000594862 ABCD4O14678 606 aa15.58■□□□□ 0.08
SHKBP1-204ENST00000594862 SLC43A1O75387 559 aa15.58■□□□□ 0.08
SHKBP1-204ENST00000594862 KRT34O76011 436 aa15.58■□□□□ 0.08
SHKBP1-204ENST00000594862 IL1RL1Q01638 556 aa15.58■□□□□ 0.08
SHKBP1-204ENST00000594862 ENTPD8Q5MY95 495 aa15.58■□□□□ 0.08
SHKBP1-204ENST00000594862 UEVLDQ8IX04 471 aa15.58■□□□□ 0.08
SHKBP1-204ENST00000594862 PIK3C3Q8NEB9 887 aa15.58■□□□□ 0.08
SHKBP1-204ENST00000594862 WFDC11Q8NEX6 87 aa15.58■□□□□ 0.08
SHKBP1-204ENST00000594862 KBTBD8Q8NFY9 601 aa15.58■□□□□ 0.08
SHKBP1-204ENST00000594862 OR6T1Q8NGN1 323 aa15.58■□□□□ 0.08
SHKBP1-204ENST00000594862 SLC41A3Q96GZ6 507 aa15.58■□□□□ 0.08
SHKBP1-204ENST00000594862 NSRP1Q9H0G5 558 aaKnown RBP15.58■□□□□ 0.08
SHKBP1-204ENST00000594862 ZNF701Q9NV72 531 aaPredicted RBP15.58■□□□□ 0.08
SHKBP1-204ENST00000594862 MRPL39Q9NYK5 338 aaKnown RBP15.58■□□□□ 0.08
SHKBP1-204ENST00000594862 TPST2O60704 377 aa15.57■□□□□ 0.08
SHKBP1-204ENST00000594862 HOXB1P14653 301 aaPredicted RBP15.57■□□□□ 0.08
SHKBP1-204ENST00000594862 PTH2RP49190 550 aa15.57■□□□□ 0.08
SHKBP1-204ENST00000594862 SELENOPP49908 381 aa15.57■□□□□ 0.08
SHKBP1-204ENST00000594862 CDH11P55287 796 aa15.57■□□□□ 0.08
SHKBP1-204ENST00000594862 CLDN17P56750 224 aa15.57■□□□□ 0.08
SHKBP1-204ENST00000594862 ETFDHQ16134 617 aa15.57■□□□□ 0.08
SHKBP1-204ENST00000594862 HMBOX1Q6NT76 420 aa15.57■□□□□ 0.08
SHKBP1-204ENST00000594862 TTC33Q6PID6 262 aaPredicted RBP15.57■□□□□ 0.08
SHKBP1-204ENST00000594862 LINC00114Q6XXX2 140 aa15.57■□□□□ 0.08
SHKBP1-204ENST00000594862 C10orf53Q8N6V4 93 aa15.57■□□□□ 0.08
SHKBP1-204ENST00000594862 OR2T12Q8NG77 320 aa15.57■□□□□ 0.08
SHKBP1-204ENST00000594862 VANGL1Q8TAA9 524 aaPredicted RBP15.57■□□□□ 0.08
SHKBP1-204ENST00000594862 ADAMTS16Q8TE57 1224 aa15.57■□□□□ 0.08
SHKBP1-204ENST00000594862 SMAP2Q8WU79 429 aaPredicted RBP15.57■□□□□ 0.08
SHKBP1-204ENST00000594862 GTPBP3Q969Y2 492 aaKnown RBP15.57■□□□□ 0.08
SHKBP1-204ENST00000594862 TRMT61AQ96FX7 289 aaKnown RBP15.57■□□□□ 0.08
SHKBP1-204ENST00000594862 PERPQ96FX8 193 aa15.57■□□□□ 0.08
SHKBP1-204ENST00000594862 ALKBH3Q96Q83 286 aaPredicted RBP15.57■□□□□ 0.08
SHKBP1-204ENST00000594862 PRR14Q9BWN1 585 aa15.57■□□□□ 0.08
SHKBP1-204ENST00000594862 GRIP2Q9C0E4 1043 aa15.57■□□□□ 0.08
SHKBP1-204ENST00000594862 ALG2Q9H553 416 aa15.57■□□□□ 0.08
SHKBP1-204ENST00000594862 NPAP1Q9NZP6 1156 aa15.57■□□□□ 0.08
SHKBP1-204ENST00000594862 B3GAT1Q9P2W7 334 aa15.57■□□□□ 0.08
SHKBP1-204ENST00000594862 NOX1Q9Y5S8 564 aa15.57■□□□□ 0.08
SHKBP1-204ENST00000594862 CPSF4LA6NMK7 179 aaKnown RBP15.56■□□□□ 0.08
SHKBP1-204ENST00000594862 BGLAPP02818 100 aa15.56■□□□□ 0.08
SHKBP1-204ENST00000594862 CD40P25942 277 aa15.56■□□□□ 0.08
SHKBP1-204ENST00000594862 ZNF83P51522 516 aa15.56■□□□□ 0.08
SHKBP1-204ENST00000594862 SF3A3Q12874 501 aaKnown RBP eCLIP15.56■□□□□ 0.08
SHKBP1-204ENST00000594862 PMS2P3Q13401 168 aa15.56■□□□□ 0.08
SHKBP1-204ENST00000594862 C9orf135Q5VTT2 229 aa15.56■□□□□ 0.08
SHKBP1-204ENST00000594862 SPATA21Q7Z572 469 aa15.56■□□□□ 0.08
SHKBP1-204ENST00000594862 KRTAP1-3Q8IUG1 177 aa15.56■□□□□ 0.08
SHKBP1-204ENST00000594862 GPR137CQ8N3F9 429 aa15.56■□□□□ 0.08
SHKBP1-204ENST00000594862 OR1K1Q8NGR3 316 aa15.56■□□□□ 0.08
SHKBP1-204ENST00000594862 LILRB1Q8NHL6 650 aaPredicted RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms