RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 B3GLCTQ6Y288 498 aa20.54■□□□□ 0.88
LSM4-204ENST00000594828 MUC15Q8N387 334 aa20.54■□□□□ 0.88
LSM4-204ENST00000594828 DPP10Q8N608 796 aa20.54■□□□□ 0.88
LSM4-204ENST00000594828 RNF217Q8TC41 542 aa20.54■□□□□ 0.88
LSM4-204ENST00000594828 SLC47A1Q96FL8 570 aa20.54■□□□□ 0.88
LSM4-204ENST00000594828 ANKRD27Q96NW4 1050 aa20.54■□□□□ 0.88
LSM4-204ENST00000594828 OXGR1Q96P68 337 aa20.54■□□□□ 0.88
LSM4-204ENST00000594828 ZNF385DQ9H6B1 395 aa20.54■□□□□ 0.88
LSM4-204ENST00000594828 OBP2BQ9NPH6 170 aa20.54■□□□□ 0.88
LSM4-204ENST00000594828 SEC14L4Q9UDX3 406 aa20.54■□□□□ 0.88
LSM4-204ENST00000594828 ATP23Q9Y6H3 246 aa20.54■□□□□ 0.88
LSM4-204ENST00000594828 TRAV36DV7A0A075B6V5 113 aa20.53■□□□□ 0.88
LSM4-204ENST00000594828 AIM2O14862 343 aa20.53■□□□□ 0.88
LSM4-204ENST00000594828 UPK3AO75631 287 aa20.53■□□□□ 0.88
LSM4-204ENST00000594828 MFN2O95140 757 aa20.53■□□□□ 0.88
LSM4-204ENST00000594828 OR1Q1Q15612 314 aa20.53■□□□□ 0.88
LSM4-204ENST00000594828 NRF1Q16656 503 aa20.53■□□□□ 0.88
LSM4-204ENST00000594828 ZNF544Q6NX49 715 aa20.53■□□□□ 0.88
LSM4-204ENST00000594828 RETREG3Q86VR2 466 aa20.53■□□□□ 0.88
LSM4-204ENST00000594828 C11orf65Q8NCR3 313 aa20.53■□□□□ 0.88
LSM4-204ENST00000594828 OR1K1Q8NGR3 316 aa20.53■□□□□ 0.88
LSM4-204ENST00000594828 TSPEARQ8WU66 669 aa20.53■□□□□ 0.88
LSM4-204ENST00000594828 ADAD1Q96M93 576 aaKnown RBP20.53■□□□□ 0.88
LSM4-204ENST00000594828 ALKBH3Q96Q83 286 aaPredicted RBP20.53■□□□□ 0.88
LSM4-204ENST00000594828 CGREF1Q99674 301 aa20.53■□□□□ 0.88
LSM4-204ENST00000594828 SIKE1Q9BRV8 207 aa20.53■□□□□ 0.88
LSM4-204ENST00000594828 CACNG6Q9BXT2 260 aa20.53■□□□□ 0.88
LSM4-204ENST00000594828 REG4Q9BYZ8 158 aa20.53■□□□□ 0.88
LSM4-204ENST00000594828 LINC00470Q9BZP3 86 aa20.53■□□□□ 0.88
LSM4-204ENST00000594828 EVA1AQ9H8M9 152 aa20.53■□□□□ 0.88
LSM4-204ENST00000594828 IGKV1D-42A0A075B6H8 117 aa20.52■□□□□ 0.88
LSM4-204ENST00000594828 A0A0G2JND7 137 aa20.52■□□□□ 0.88
LSM4-204ENST00000594828 M0R082 166 aa20.52■□□□□ 0.88
LSM4-204ENST00000594828 FZD7O75084 574 aa20.52■□□□□ 0.88
LSM4-204ENST00000594828 PCSK6P29122 969 aa20.52■□□□□ 0.88
LSM4-204ENST00000594828 GRPRP30550 384 aa20.52■□□□□ 0.88
LSM4-204ENST00000594828 DMTNQ08495 405 aa20.52■□□□□ 0.88
LSM4-204ENST00000594828 RBBP4Q09028 425 aa20.52■□□□□ 0.88
LSM4-204ENST00000594828 C1DQ13901 141 aaKnown RBP20.52■□□□□ 0.88
LSM4-204ENST00000594828 CYP51A1Q16850 503 aa20.52■□□□□ 0.88
LSM4-204ENST00000594828 TBRG1Q3YBR2 411 aa20.52■□□□□ 0.88
LSM4-204ENST00000594828 C11orf71Q6IPW1 123 aa20.52■□□□□ 0.88
LSM4-204ENST00000594828 HMBOX1Q6NT76 420 aa20.52■□□□□ 0.88
LSM4-204ENST00000594828 H1FNTQ75WM6 255 aaPredicted RBP20.52■□□□□ 0.88
LSM4-204ENST00000594828 LINGO2Q7L985 606 aa20.52■□□□□ 0.88
LSM4-204ENST00000594828 PTOV1Q86YD1 416 aa20.52■□□□□ 0.88
LSM4-204ENST00000594828 SMYD1Q8NB12 490 aa20.52■□□□□ 0.88
LSM4-204ENST00000594828 ZNF417Q8TAU3 575 aa20.52■□□□□ 0.88
LSM4-204ENST00000594828 ZNF587Q96SQ5 575 aaPredicted RBP20.52■□□□□ 0.88
LSM4-204ENST00000594828 WFDC6Q9BQY6 131 aa20.52■□□□□ 0.88
LSM4-204ENST00000594828 B3GAT1Q9P2W7 334 aa20.52■□□□□ 0.88
LSM4-204ENST00000594828 RCE1Q9Y256 329 aa20.52■□□□□ 0.88
LSM4-204ENST00000594828 A0A087WUJ7 227 aa20.51■□□□□ 0.87
LSM4-204ENST00000594828 A0A0B4J2E0 115 aa20.51■□□□□ 0.87
LSM4-204ENST00000594828 A0A1B0GX12 115 aa20.51■□□□□ 0.87
LSM4-204ENST00000594828 SSX4O60224 188 aa20.51■□□□□ 0.87
LSM4-204ENST00000594828 TPST2O60704 377 aa20.51■□□□□ 0.87
LSM4-204ENST00000594828 CBLP22681 906 aa20.51■□□□□ 0.87
LSM4-204ENST00000594828 PAX7P23759 505 aa20.51■□□□□ 0.87
LSM4-204ENST00000594828 MTPNP58546 118 aa20.51■□□□□ 0.87
LSM4-204ENST00000594828 UBE2NP61088 152 aaKnown RBP20.51■□□□□ 0.87
LSM4-204ENST00000594828 IL1RL1Q01638 556 aa20.51■□□□□ 0.87
LSM4-204ENST00000594828 SELPLGQ14242 412 aa20.51■□□□□ 0.87
LSM4-204ENST00000594828 METTL21CQ5VZV1 264 aa20.51■□□□□ 0.87
LSM4-204ENST00000594828 DNM1P46Q6ZS02 220 aa20.51■□□□□ 0.87
LSM4-204ENST00000594828 RANBP3LQ86VV4 465 aaPredicted RBP20.51■□□□□ 0.87
LSM4-204ENST00000594828 MAPK1IP1LQ8NDC0 245 aa20.51■□□□□ 0.87
LSM4-204ENST00000594828 BCL2L2Q92843 193 aaPredicted RBP20.51■□□□□ 0.87
LSM4-204ENST00000594828 KLHL14Q9P2G3 628 aa20.51■□□□□ 0.87
LSM4-204ENST00000594828 LOC102725191A0A1B0GVB3 256 aa20.5■□□□□ 0.87
LSM4-204ENST00000594828 M0QX08 132 aa20.5■□□□□ 0.87
LSM4-204ENST00000594828 SLC43A1O75387 559 aa20.5■□□□□ 0.87
LSM4-204ENST00000594828 ZNF432O94892 652 aa20.5■□□□□ 0.87
LSM4-204ENST00000594828 APOBEC3AP31941 199 aaPredicted RBP20.5■□□□□ 0.87
LSM4-204ENST00000594828 PCBP3P57721 371 aaKnown RBP20.5■□□□□ 0.87
LSM4-204ENST00000594828 PPP2R2BQ00005 443 aa20.5■□□□□ 0.87
LSM4-204ENST00000594828 ROR2Q01974 943 aaKnown RBP20.5■□□□□ 0.87
LSM4-204ENST00000594828 NFYCQ13952 458 aa20.5■□□□□ 0.87
LSM4-204ENST00000594828 MFSD13AQ14CX5 517 aa20.5■□□□□ 0.87
LSM4-204ENST00000594828 ANKRD16Q6P6B7 361 aa20.5■□□□□ 0.87
LSM4-204ENST00000594828 OR6S1Q8NH40 331 aa20.5■□□□□ 0.87
LSM4-204ENST00000594828 ZNF317Q96PQ6 595 aaPredicted RBP20.5■□□□□ 0.87
LSM4-204ENST00000594828 EPYCQ99645 322 aa20.5■□□□□ 0.87
LSM4-204ENST00000594828 MOKQ9UQ07 419 aa20.5■□□□□ 0.87
LSM4-204ENST00000594828 ATP6V1G2-DDX39BF2Z307 99 aa20.49■□□□□ 0.87
LSM4-204ENST00000594828 SASH3O75995 380 aa20.49■□□□□ 0.87
LSM4-204ENST00000594828 CDH12P55289 794 aa20.49■□□□□ 0.87
LSM4-204ENST00000594828 SH3BGRP55822 239 aaPredicted RBP20.49■□□□□ 0.87
LSM4-204ENST00000594828 RAB35Q15286 201 aa20.49■□□□□ 0.87
LSM4-204ENST00000594828 DUSP7Q16829 419 aa20.49■□□□□ 0.87
LSM4-204ENST00000594828 ANKK1Q8NFD2 765 aa20.49■□□□□ 0.87
LSM4-204ENST00000594828 MAGEE2Q8TD90 523 aaPredicted RBP20.49■□□□□ 0.87
LSM4-204ENST00000594828 CORINQ9Y5Q5 1042 aa20.49■□□□□ 0.87
LSM4-204ENST00000594828 A0A096LPE4 126 aa20.48■□□□□ 0.87
LSM4-204ENST00000594828 ARPC4-TTLL3A0A0A6YYG9 625 aa20.48■□□□□ 0.87
LSM4-204ENST00000594828 IGHV1-18A0A0C4DH31 117 aa20.48■□□□□ 0.87
LSM4-204ENST00000594828 A0A1W2PPZ6 126 aa20.48■□□□□ 0.87
LSM4-204ENST00000594828 INAFM1C9JVW0 142 aa20.48■□□□□ 0.87
LSM4-204ENST00000594828 MS4A18H0YCH9 400 aa20.48■□□□□ 0.87
LSM4-204ENST00000594828 RPL36A-HNRNPH2H7BZ11 118 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms