RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 GADD45GO95257 159 aa13.26□□□□□ -0.29
DDX39A-221ENST00000593026 HIST1H2ABP04908 130 aa13.26□□□□□ -0.29
DDX39A-221ENST00000593026 IFI30P13284 250 aa13.26□□□□□ -0.29
DDX39A-221ENST00000593026 GRNP28799 593 aaKnown RBP13.26□□□□□ -0.29
DDX39A-221ENST00000593026 UQCRC1P31930 480 aa13.26□□□□□ -0.29
DDX39A-221ENST00000593026 MAGEA2P43356 314 aa13.26□□□□□ -0.29
DDX39A-221ENST00000593026 IL1RL1Q01638 556 aa13.26□□□□□ -0.29
DDX39A-221ENST00000593026 TFAP2EQ6VUC0 442 aa13.26□□□□□ -0.29
DDX39A-221ENST00000593026 HIST3H2AQ7L7L0 130 aa13.26□□□□□ -0.29
DDX39A-221ENST00000593026 RRM2BQ7LG56 351 aa13.26□□□□□ -0.29
DDX39A-221ENST00000593026 ADGRG5Q8IZF4 528 aa13.26□□□□□ -0.29
DDX39A-221ENST00000593026 RNF113BQ8IZP6 322 aaKnown RBP13.26□□□□□ -0.29
DDX39A-221ENST00000593026 ZNF610Q8N9Z0 462 aa13.26□□□□□ -0.29
DDX39A-221ENST00000593026 OR5J2Q8NH18 312 aa13.26□□□□□ -0.29
DDX39A-221ENST00000593026 SLC7A13Q8TCU3 470 aa13.26□□□□□ -0.29
DDX39A-221ENST00000593026 HIST1H2ACQ93077 130 aa13.26□□□□□ -0.29
DDX39A-221ENST00000593026 DHRS1Q96LJ7 313 aa13.26□□□□□ -0.29
DDX39A-221ENST00000593026 OXGR1Q96P68 337 aa13.26□□□□□ -0.29
DDX39A-221ENST00000593026 NPDC1Q9NQX5 325 aaPredicted RBP13.26□□□□□ -0.29
DDX39A-221ENST00000593026 GALNT8Q9NY28 637 aa13.26□□□□□ -0.29
DDX39A-221ENST00000593026 ZNF229Q9UJW7 825 aa13.26□□□□□ -0.29
DDX39A-221ENST00000593026 HECTD1Q9ULT8 2610 aa13.26□□□□□ -0.29
DDX39A-221ENST00000593026 AURKCQ9UQB9 309 aa13.26□□□□□ -0.29
DDX39A-221ENST00000593026 USP9YO00507 2555 aaPredicted RBP13.25□□□□□ -0.29
DDX39A-221ENST00000593026 TRBV4-1A0A0J9YWV2 114 aa13.25□□□□□ -0.29
DDX39A-221ENST00000593026 C19orf84I3L1E1 186 aa13.25□□□□□ -0.29
DDX39A-221ENST00000593026 MRPL33O75394 65 aaKnown RBP13.25□□□□□ -0.29
DDX39A-221ENST00000593026 CIB2O75838 187 aa13.25□□□□□ -0.29
DDX39A-221ENST00000593026 RAP2AP10114 183 aa13.25□□□□□ -0.29
DDX39A-221ENST00000593026 ZNF43P17038 809 aa13.25□□□□□ -0.29
DDX39A-221ENST00000593026 HOXB6P17509 224 aaKnown RBP13.25□□□□□ -0.29
DDX39A-221ENST00000593026 RRM2P31350 389 aa13.25□□□□□ -0.29
DDX39A-221ENST00000593026 OR3A2P47893 321 aa13.25□□□□□ -0.29
DDX39A-221ENST00000593026 LSM11P83369 360 aaKnown RBP eCLIP13.25□□□□□ -0.29
DDX39A-221ENST00000593026 PUDPQ08623 228 aa13.25□□□□□ -0.29
DDX39A-221ENST00000593026 C1DQ13901 141 aaKnown RBP13.25□□□□□ -0.29
DDX39A-221ENST00000593026 POU4F3Q15319 338 aa13.25□□□□□ -0.29
DDX39A-221ENST00000593026 C1orf146Q5VVC0 180 aa13.25□□□□□ -0.29
DDX39A-221ENST00000593026 PODNL1Q6PEZ8 512 aa13.25□□□□□ -0.29
DDX39A-221ENST00000593026 CASP12Q6UXS9 341 aa13.25□□□□□ -0.29
DDX39A-221ENST00000593026 MBOAT2Q6ZWT7 520 aa13.25□□□□□ -0.29
DDX39A-221ENST00000593026 SLC46A3Q7Z3Q1 461 aa13.25□□□□□ -0.29
DDX39A-221ENST00000593026 NANOGNBQ7Z5D8 188 aa13.25□□□□□ -0.29
DDX39A-221ENST00000593026 NRMQ8IXM6 262 aa13.25□□□□□ -0.29
DDX39A-221ENST00000593026 ZNF100Q8IYN0 542 aa13.25□□□□□ -0.29
DDX39A-221ENST00000593026 CDK20Q8IZL9 346 aa13.25□□□□□ -0.29
DDX39A-221ENST00000593026 KDM8Q8N371 416 aa13.25□□□□□ -0.29
DDX39A-221ENST00000593026 LRRC17Q8N6Y2 441 aa13.25□□□□□ -0.29
DDX39A-221ENST00000593026 OR52J3Q8NH60 311 aa13.25□□□□□ -0.29
DDX39A-221ENST00000593026 BPIFA2Q96DR5 249 aa13.25□□□□□ -0.29
DDX39A-221ENST00000593026 PARPBPQ9NWS1 579 aa13.25□□□□□ -0.29
DDX39A-221ENST00000593026 B3GAT1Q9P2W7 334 aa13.25□□□□□ -0.29
DDX39A-221ENST00000593026 SPTAN1Q13813 2472 aaKnown RBP13.24□□□□□ -0.29
DDX39A-221ENST00000593026 HCFC1P51610 2035 aa13.24□□□□□ -0.29
DDX39A-221ENST00000593026 LOC102725191A0A1B0GVB3 256 aa13.24□□□□□ -0.29
DDX39A-221ENST00000593026 TCRBV3S1A0A5B6 114 aa13.24□□□□□ -0.29
DDX39A-221ENST00000593026 MS4A18H0YCH9 400 aa13.24□□□□□ -0.29
DDX39A-221ENST00000593026 PLPP3O14495 311 aa13.24□□□□□ -0.29
DDX39A-221ENST00000593026 OR6A2O95222 327 aa13.24□□□□□ -0.29
DDX39A-221ENST00000593026 ASAH2BP0C7U1 165 aa13.24□□□□□ -0.29
DDX39A-221ENST00000593026 ADORA3P0DMS8 318 aa13.24□□□□□ -0.29
DDX39A-221ENST00000593026 FUT1P19526 365 aa13.24□□□□□ -0.29
DDX39A-221ENST00000593026 AHCYP23526 432 aa13.24□□□□□ -0.29
DDX39A-221ENST00000593026 ERFP50548 548 aa13.24□□□□□ -0.29
DDX39A-221ENST00000593026 PRKCDQ05655 676 aa13.24□□□□□ -0.29
DDX39A-221ENST00000593026 EXOC3L2Q2M3D2 409 aa13.24□□□□□ -0.29
DDX39A-221ENST00000593026 MS4A18Q3C1V0 323 aa13.24□□□□□ -0.29
DDX39A-221ENST00000593026 ZNF474Q6S9Z5 364 aaPredicted RBP13.24□□□□□ -0.29
DDX39A-221ENST00000593026 TBPL2Q6SJ96 375 aa13.24□□□□□ -0.29
DDX39A-221ENST00000593026 BEND4Q6ZU67 534 aa13.24□□□□□ -0.29
DDX39A-221ENST00000593026 CREB3L2Q70SY1 520 aa13.24□□□□□ -0.29
DDX39A-221ENST00000593026 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.24□□□□□ -0.29
DDX39A-221ENST00000593026 EPHX4Q8IUS5 362 aa13.24□□□□□ -0.29
DDX39A-221ENST00000593026 UEVLDQ8IX04 471 aa13.24□□□□□ -0.29
DDX39A-221ENST00000593026 ZIC4Q8N9L1 334 aa13.24□□□□□ -0.29
DDX39A-221ENST00000593026 OR4K5Q8NGD3 323 aa13.24□□□□□ -0.29
DDX39A-221ENST00000593026 CANT1Q8WVQ1 401 aa13.24□□□□□ -0.29
DDX39A-221ENST00000593026 LIPHQ8WWY8 451 aa13.24□□□□□ -0.29
DDX39A-221ENST00000593026 TMEM45BQ96B21 275 aa13.24□□□□□ -0.29
DDX39A-221ENST00000593026 APH1AQ96BI3 265 aa13.24□□□□□ -0.29
DDX39A-221ENST00000593026 RSRC1Q96IZ7 334 aaKnown RBP13.24□□□□□ -0.29
DDX39A-221ENST00000593026 ZNF385AQ96PM9 386 aaKnown RBP13.24□□□□□ -0.29
DDX39A-221ENST00000593026 FANCFQ9NPI8 374 aa13.24□□□□□ -0.29
DDX39A-221ENST00000593026 COL12A1Q99715 3063 aa13.24□□□□□ -0.29
DDX39A-221ENST00000593026 ICE1Q9Y2F5 2266 aa13.23□□□□□ -0.29
DDX39A-221ENST00000593026 KRT36O76013 467 aa13.23□□□□□ -0.29
DDX39A-221ENST00000593026 HPRP00739 348 aa13.23□□□□□ -0.29
DDX39A-221ENST00000593026 SAGP10523 405 aaPredicted RBP13.23□□□□□ -0.29
DDX39A-221ENST00000593026 POU2F1P14859 743 aa13.23□□□□□ -0.29
DDX39A-221ENST00000593026 NTF4P34130 210 aa13.23□□□□□ -0.29
DDX39A-221ENST00000593026 CD79BP40259 229 aa13.23□□□□□ -0.29
DDX39A-221ENST00000593026 GABPB1Q06547 395 aaPredicted RBP13.23□□□□□ -0.29
DDX39A-221ENST00000593026 SP5Q6BEB4 398 aaPredicted RBP13.23□□□□□ -0.29
DDX39A-221ENST00000593026 AAED1Q7RTV5 226 aa13.23□□□□□ -0.29
DDX39A-221ENST00000593026 YTHDF3Q7Z739 585 aaKnown RBP13.23□□□□□ -0.29
DDX39A-221ENST00000593026 KIF18BQ86Y91 864 aa13.23□□□□□ -0.29
DDX39A-221ENST00000593026 UTP4Q969X6 686 aaKnown RBP13.23□□□□□ -0.29
DDX39A-221ENST00000593026 ALPK1Q96QP1 1244 aa13.23□□□□□ -0.29
DDX39A-221ENST00000593026 FUZQ9BT04 418 aa13.23□□□□□ -0.29
DDX39A-221ENST00000593026 CHID1Q9BWS9 393 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms