RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 LOC100289279A0A1B0GTE1 492 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 A0A1B0GVT2 93 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 SMLR1H3BR10 107 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 H3BUI4 141 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 GMFGO60234 142 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 TNFP01375 233 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 LPLP06858 475 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 ACSM4P0C7M7 580 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 MAOBP27338 520 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 S100A2P29034 98 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 PBX2P40425 430 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 SOX2P48431 317 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 FNTBP49356 437 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 MVDP53602 400 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 ISXQ2M1V0 245 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 CDNFQ49AH0 187 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 AVPI1Q5T686 147 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 STEAP1BQ6NZ63 245 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 FIGLAQ6QHK4 219 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 ACOT7LQ6ZUV0 252 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 OVCH2Q7RTZ1 564 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 C12orf40Q86WS4 652 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 SKA3Q8IX90 412 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 KCT2Q8NC54 265 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 OR2L3Q8NG85 312 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 OR13C2Q8NGS9 318 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 RBM14Q96PK6 669 aaKnown RBP3.26□□□□□ -1.89
VMP1-216ENST00000592790 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.26□□□□□ -1.89
VMP1-216ENST00000592790 TBL1XR1Q9BZK7 514 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 GHITMQ9H3K2 345 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 RGCCQ9H4X1 137 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 WDR76Q9H967 626 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 APMAPQ9HDC9 416 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 NOX4Q9NPH5 578 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 PRTFDC1Q9NRG1 225 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 SERINC1Q9NRX5 453 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 KCNK6Q9Y257 313 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 KCNIP3Q9Y2W7 256 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 ZNF175Q9Y473 711 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 NEUROG3Q9Y4Z2 214 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 WIF1Q9Y5W5 379 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 A0A1W2PPK0 400 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 RFPL4AA6NLU0 287 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 NPIPA5E9PKD4 350 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 RFPL4AL1F8VTS6 287 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 FFAR1O14842 300 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 OGG1O15527 345 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 XRCC3O43542 346 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 FRS3O43559 492 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 OR2T1O43869 369 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 IFNA17P01571 189 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 MAS1P04201 325 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 IGFBP1P08833 259 aaPredicted RBP3.26□□□□□ -1.89
VMP1-216ENST00000592790 ZNF888P0CJ79 500 aaPredicted RBP3.26□□□□□ -1.89
VMP1-216ENST00000592790 ZNF35P13682 527 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 RPA2P15927 270 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 TM4SF4P48230 202 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 NR0B1P51843 470 aaKnown RBP3.26□□□□□ -1.89
VMP1-216ENST00000592790 PDX1P52945 283 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 HCCSP53701 268 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 TAS2R20P59543 309 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 CTXN1P60606 82 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 UBE2MP61081 183 aaKnown RBP3.26□□□□□ -1.89
VMP1-216ENST00000592790 DCAF7P61962 342 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 ARFRP1Q13795 201 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 DOC2BQ14184 412 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 FGL2Q14314 439 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 PEA15Q15121 130 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 CST6Q15828 149 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 DEFB134Q4QY38 66 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 PXDC1Q5TGL8 231 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 ZNF626Q68DY1 528 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 ELP2Q6IA86 826 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 ALKAL2Q6UX46 152 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 RSPO2Q6UXX9 243 aaPredicted RBP3.26□□□□□ -1.89
VMP1-216ENST00000592790 CFAP77Q6ZQR2 320 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 RFLNAQ6ZTI6 216 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 USP53Q70EK8 1073 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 STX12Q86Y82 276 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 CSNK1A1LQ8N752 337 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 TMEM99Q8N816 258 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 ZNF740Q8NDX6 193 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 SDR9C7Q8NEX9 313 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 OR2AK2Q8NG84 335 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 OR52E1Q8NGJ3 308 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 NT5CQ8TCD5 201 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 PHOSPHO1Q8TCT1 267 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 ING5Q8WYH8 240 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 YIPF5Q969M3 257 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 C16orf58Q96GQ5 468 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 SCLYQ96I15 445 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 RNF170Q96K19 258 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 C5orf34Q96MH7 638 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 TOX2Q96NM4 488 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 RBP7Q96R05 134 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 OR14A2Q96R54 314 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 ALG12Q9BV10 488 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 ZNF700Q9H0M5 742 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 RNF208Q9H0X6 261 aa3.26□□□□□ -1.89
VMP1-216ENST00000592790 LDAHQ9H6V9 325 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms