RNA–Protein interactions for RNA: ENST00000592467.1

CIRBP-239, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-239ENST00000592467 CCDC80Q76M96 950 aa17.68■□□□□ 0.42
CIRBP-239ENST00000592467 YTHDF3Q7Z739 585 aaKnown RBP17.68■□□□□ 0.42
CIRBP-239ENST00000592467 RBM45Q8IUH3 476 aaKnown RBP17.68■□□□□ 0.42
CIRBP-239ENST00000592467 OR6S1Q8NH40 331 aa17.68■□□□□ 0.42
CIRBP-239ENST00000592467 ZNF417Q8TAU3 575 aa17.68■□□□□ 0.42
CIRBP-239ENST00000592467 SMAP2Q8WU79 429 aaPredicted RBP17.68■□□□□ 0.42
CIRBP-239ENST00000592467 C10orf82Q8WW14 230 aa17.68■□□□□ 0.42
CIRBP-239ENST00000592467 LRRC58Q96CX6 371 aa17.68■□□□□ 0.42
CIRBP-239ENST00000592467 C18orf12Q96KH6 178 aa17.68■□□□□ 0.42
CIRBP-239ENST00000592467 ZNF317Q96PQ6 595 aaPredicted RBP17.68■□□□□ 0.42
CIRBP-239ENST00000592467 ZNF587Q96SQ5 575 aaPredicted RBP17.68■□□□□ 0.42
CIRBP-239ENST00000592467 SMR3AQ99954 134 aa17.68■□□□□ 0.42
CIRBP-239ENST00000592467 TMEM27Q9HBJ8 222 aa17.68■□□□□ 0.42
CIRBP-239ENST00000592467 USP22Q9UPT9 525 aa17.68■□□□□ 0.42
CIRBP-239ENST00000592467 MAGED1Q9Y5V3 778 aaPredicted RBP17.68■□□□□ 0.42
CIRBP-239ENST00000592467 LOC102725191A0A1B0GVB3 256 aa17.67■□□□□ 0.42
CIRBP-239ENST00000592467 MS4A18H0YCH9 400 aa17.67■□□□□ 0.42
CIRBP-239ENST00000592467 CD40P25942 277 aa17.67■□□□□ 0.42
CIRBP-239ENST00000592467 ZNF83P51522 516 aa17.67■□□□□ 0.42
CIRBP-239ENST00000592467 MS4A18Q3C1V0 323 aa17.67■□□□□ 0.42
CIRBP-239ENST00000592467 SWT1Q5T5J6 900 aaKnown RBP17.67■□□□□ 0.42
CIRBP-239ENST00000592467 NIPAL3Q6P499 406 aa17.67■□□□□ 0.42
CIRBP-239ENST00000592467 WDR88Q6ZMY6 472 aa17.67■□□□□ 0.42
CIRBP-239ENST00000592467 PATL1Q86TB9 770 aaKnown RBP17.67■□□□□ 0.42
CIRBP-239ENST00000592467 SLC30A8Q8IWU4 369 aa17.67■□□□□ 0.42
CIRBP-239ENST00000592467 ADPRHL1Q8NDY3 354 aa17.67■□□□□ 0.42
CIRBP-239ENST00000592467 OR8J3Q8NGG0 315 aa17.67■□□□□ 0.42
CIRBP-239ENST00000592467 Q96MF0 132 aa17.67■□□□□ 0.42
CIRBP-239ENST00000592467 OXGR1Q96P68 337 aa17.67■□□□□ 0.42
CIRBP-239ENST00000592467 MCHR1Q99705 422 aa17.67■□□□□ 0.42
CIRBP-239ENST00000592467 TMEM43Q9BTV4 400 aa17.67■□□□□ 0.42
CIRBP-239ENST00000592467 LINC00470Q9BZP3 86 aa17.67■□□□□ 0.42
CIRBP-239ENST00000592467 NELFAQ9H3P2 528 aa17.67■□□□□ 0.42
CIRBP-239ENST00000592467 B3GALT5Q9Y2C3 310 aa17.67■□□□□ 0.42
CIRBP-239ENST00000592467 NIPBLQ6KC79 2804 aaeCLIP17.67■□□□□ 0.42
CIRBP-239ENST00000592467 ZANQ9Y493 2812 aa17.67■□□□□ 0.42
CIRBP-239ENST00000592467 AIM2O14862 343 aa17.66■□□□□ 0.42
CIRBP-239ENST00000592467 TRAF3IP2O43734 574 aaPredicted RBP17.66■□□□□ 0.42
CIRBP-239ENST00000592467 HPRP00739 348 aa17.66■□□□□ 0.42
CIRBP-239ENST00000592467 PTNP21246 168 aa17.66■□□□□ 0.42
CIRBP-239ENST00000592467 NCALDP61601 193 aa17.66■□□□□ 0.42
CIRBP-239ENST00000592467 RPS4XP62701 263 aaKnown RBP17.66■□□□□ 0.42
CIRBP-239ENST00000592467 CYLC2Q14093 348 aaPredicted RBP17.66■□□□□ 0.42
CIRBP-239ENST00000592467 ZNF613Q6PF04 617 aa17.66■□□□□ 0.42
CIRBP-239ENST00000592467 B3GLCTQ6Y288 498 aa17.66■□□□□ 0.42
CIRBP-239ENST00000592467 H1FNTQ75WM6 255 aaPredicted RBP17.66■□□□□ 0.42
CIRBP-239ENST00000592467 DTX2Q86UW9 622 aa17.66■□□□□ 0.42
CIRBP-239ENST00000592467 RANBP3LQ86VV4 465 aaPredicted RBP17.66■□□□□ 0.42
CIRBP-239ENST00000592467 SNX32Q86XE0 403 aa17.66■□□□□ 0.42
CIRBP-239ENST00000592467 WDFY1Q8IWB7 410 aa17.66■□□□□ 0.42
CIRBP-239ENST00000592467 COX4I2Q96KJ9 171 aa17.66■□□□□ 0.42
CIRBP-239ENST00000592467 ZNF583Q96ND8 569 aa17.66■□□□□ 0.42
CIRBP-239ENST00000592467 MOGAT1Q96PD6 335 aa17.66■□□□□ 0.42
CIRBP-239ENST00000592467 ALKBH3Q96Q83 286 aaPredicted RBP17.66■□□□□ 0.42
CIRBP-239ENST00000592467 C1QTNF6Q9BXI9 259 aa17.66■□□□□ 0.42
CIRBP-239ENST00000592467 PCDHAC1Q9H158 963 aa17.66■□□□□ 0.42
CIRBP-239ENST00000592467 CXorf56Q9H5V9 222 aa17.66■□□□□ 0.42
CIRBP-239ENST00000592467 MRGBPQ9NV56 204 aa17.66■□□□□ 0.42
CIRBP-239ENST00000592467 CISD1Q9NZ45 108 aaKnown RBP17.66■□□□□ 0.42
CIRBP-239ENST00000592467 RCE1Q9Y256 329 aa17.66■□□□□ 0.42
CIRBP-239ENST00000592467 AMDHD2Q9Y303 409 aa17.66■□□□□ 0.42
CIRBP-239ENST00000592467 HEATR1Q9H583 2144 aaKnown RBP17.65■□□□□ 0.42
CIRBP-239ENST00000592467 BBIP1A8MTZ0 92 aa17.65■□□□□ 0.42
CIRBP-239ENST00000592467 E7EQL1 145 aa17.65■□□□□ 0.42
CIRBP-239ENST00000592467 LRRN3E7EW58 273 aa17.65■□□□□ 0.42
CIRBP-239ENST00000592467 MRASO14807 208 aa17.65■□□□□ 0.42
CIRBP-239ENST00000592467 NPPAP01160 153 aa17.65■□□□□ 0.42
CIRBP-239ENST00000592467 CBLP22681 906 aa17.65■□□□□ 0.42
CIRBP-239ENST00000592467 PTAFRP25105 342 aa17.65■□□□□ 0.42
CIRBP-239ENST00000592467 MDH1P40925 334 aaKnown RBP17.65■□□□□ 0.42
CIRBP-239ENST00000592467 CLDN17P56750 224 aa17.65■□□□□ 0.42
CIRBP-239ENST00000592467 TGFBR3Q03167 851 aa17.65■□□□□ 0.42
CIRBP-239ENST00000592467 HIKESHIQ53FT3 197 aa17.65■□□□□ 0.42
CIRBP-239ENST00000592467 ENTPD8Q5MY95 495 aa17.65■□□□□ 0.42
CIRBP-239ENST00000592467 C1QTNF12Q5T7M4 302 aa17.65■□□□□ 0.42
CIRBP-239ENST00000592467 TMEM108Q6UXF1 575 aa17.65■□□□□ 0.42
CIRBP-239ENST00000592467 OR1K1Q8NGR3 316 aa17.65■□□□□ 0.42
CIRBP-239ENST00000592467 TRAF4Q9BUZ4 470 aaPredicted RBP17.65■□□□□ 0.42
CIRBP-239ENST00000592467 GRIP2Q9C0E4 1043 aa17.65■□□□□ 0.42
CIRBP-239ENST00000592467 MED4Q9NPJ6 270 aa17.65■□□□□ 0.42
CIRBP-239ENST00000592467 SLC13A4Q9UKG4 626 aa17.65■□□□□ 0.42
CIRBP-239ENST00000592467 ALPK2Q86TB3 2170 aa17.64■□□□□ 0.42
CIRBP-239ENST00000592467 LOC100653049A0A140TA62 436 aa17.64■□□□□ 0.41
CIRBP-239ENST00000592467 TRIM64A6NGJ6 449 aa17.64■□□□□ 0.41
CIRBP-239ENST00000592467 TRIM64BA6NI03 449 aa17.64■□□□□ 0.41
CIRBP-239ENST00000592467 RPL36A-HNRNPH2H7BZ11 118 aa17.64■□□□□ 0.41
CIRBP-239ENST00000592467 CHP2O43745 196 aa17.64■□□□□ 0.41
CIRBP-239ENST00000592467 KRT34O76011 436 aa17.64■□□□□ 0.41
CIRBP-239ENST00000592467 INHBBP09529 407 aa17.64■□□□□ 0.41
CIRBP-239ENST00000592467 HLA-DOBP13765 273 aa17.64■□□□□ 0.41
CIRBP-239ENST00000592467 ZNF43P17038 809 aa17.64■□□□□ 0.41
CIRBP-239ENST00000592467 CDH11P55287 796 aa17.64■□□□□ 0.41
CIRBP-239ENST00000592467 BIVMQ86UB2 503 aa17.64■□□□□ 0.41
CIRBP-239ENST00000592467 TMEM123Q8N131 208 aa17.64■□□□□ 0.41
CIRBP-239ENST00000592467 BCL2L2Q92843 193 aaPredicted RBP17.64■□□□□ 0.41
CIRBP-239ENST00000592467 RADILQ96JH8 1075 aa17.64■□□□□ 0.41
CIRBP-239ENST00000592467 ZNF426Q9BUY5 554 aa17.64■□□□□ 0.41
CIRBP-239ENST00000592467 MGAT4BQ9UQ53 548 aa17.64■□□□□ 0.41
CIRBP-239ENST00000592467 OR6C65A6NJZ3 312 aa17.63■□□□□ 0.41
CIRBP-239ENST00000592467 CPSF4LA6NMK7 179 aaKnown RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms