RNA–Protein interactions for RNA: ENST00000592445.1

PRKCSH-216, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-216ENST00000592445 AWAT1Q58HT5 328 aa16.9■□□□□ 0.3
PRKCSH-216ENST00000592445 PRR31Q5SQ13 230 aa16.9■□□□□ 0.3
PRKCSH-216ENST00000592445 MRPL2Q5T653 305 aaKnown RBP16.9■□□□□ 0.3
PRKCSH-216ENST00000592445 ANXA8L1Q5VT79 327 aa16.9■□□□□ 0.3
PRKCSH-216ENST00000592445 MDP1Q86V88 176 aa16.9■□□□□ 0.3
PRKCSH-216ENST00000592445 RDH5Q92781 318 aa16.9■□□□□ 0.3
PRKCSH-216ENST00000592445 C16orf45Q96MC5 204 aaPredicted RBP16.9■□□□□ 0.3
PRKCSH-216ENST00000592445 TRNT1Q96Q11 434 aaKnown RBP16.9■□□□□ 0.3
PRKCSH-216ENST00000592445 SLC35A5Q9BS91 424 aa16.9■□□□□ 0.3
PRKCSH-216ENST00000592445 MRPL37Q9BZE1 423 aaKnown RBP16.9■□□□□ 0.3
PRKCSH-216ENST00000592445 ZDHHC2Q9UIJ5 367 aa16.9■□□□□ 0.3
PRKCSH-216ENST00000592445 LOC105371242A0A075B767 164 aa16.89■□□□□ 0.29
PRKCSH-216ENST00000592445 TRAV20A0A0B4J274 112 aa16.89■□□□□ 0.29
PRKCSH-216ENST00000592445 HMGN4O00479 90 aa16.89■□□□□ 0.29
PRKCSH-216ENST00000592445 WNT9BO14905 357 aa16.89■□□□□ 0.29
PRKCSH-216ENST00000592445 PPIHO43447 177 aaKnown RBP16.89■□□□□ 0.29
PRKCSH-216ENST00000592445 HPXP02790 462 aa16.89■□□□□ 0.29
PRKCSH-216ENST00000592445 NR4A1P22736 598 aa16.89■□□□□ 0.29
PRKCSH-216ENST00000592445 EVX1P49640 407 aa16.89■□□□□ 0.29
PRKCSH-216ENST00000592445 ARFIP2P53365 341 aa16.89■□□□□ 0.29
PRKCSH-216ENST00000592445 CLDN17P56750 224 aa16.89■□□□□ 0.29
PRKCSH-216ENST00000592445 COPZ1P61923 177 aa16.89■□□□□ 0.29
PRKCSH-216ENST00000592445 ZNF311Q5JNZ3 666 aa16.89■□□□□ 0.29
PRKCSH-216ENST00000592445 C1orf140Q5VVS0 124 aa16.89■□□□□ 0.29
PRKCSH-216ENST00000592445 REP15Q6BDI9 236 aa16.89■□□□□ 0.29
PRKCSH-216ENST00000592445 ZNF440Q8IYI8 595 aa16.89■□□□□ 0.29
PRKCSH-216ENST00000592445 KDM8Q8N371 416 aa16.89■□□□□ 0.29
PRKCSH-216ENST00000592445 GPR137CQ8N3F9 429 aa16.89■□□□□ 0.29
PRKCSH-216ENST00000592445 ANKK1Q8NFD2 765 aa16.89■□□□□ 0.29
PRKCSH-216ENST00000592445 MRPL24Q96A35 216 aaKnown RBP16.89■□□□□ 0.29
PRKCSH-216ENST00000592445 SUCNR1Q9BXA5 334 aa16.89■□□□□ 0.29
PRKCSH-216ENST00000592445 RACGAP1Q9H0H5 632 aa16.89■□□□□ 0.29
PRKCSH-216ENST00000592445 SLC38A1Q9H2H9 487 aa16.89■□□□□ 0.29
PRKCSH-216ENST00000592445 MTHFD2LQ9H903 347 aaPredicted RBP16.89■□□□□ 0.29
PRKCSH-216ENST00000592445 ZNF503-AS2A6NEH8 195 aa16.88■□□□□ 0.29
PRKCSH-216ENST00000592445 RPL36A-HNRNPH2H7BZ11 118 aa16.88■□□□□ 0.29
PRKCSH-216ENST00000592445 FRS3O43559 492 aa16.88■□□□□ 0.29
PRKCSH-216ENST00000592445 SLC43A1O75387 559 aa16.88■□□□□ 0.29
PRKCSH-216ENST00000592445 DBIP07108 87 aaKnown RBP16.88■□□□□ 0.29
PRKCSH-216ENST00000592445 GKN3PP0CG01 181 aa16.88■□□□□ 0.29
PRKCSH-216ENST00000592445 TMEM33P57088 247 aa16.88■□□□□ 0.29
PRKCSH-216ENST00000592445 WBP2NLQ6ICG8 309 aa16.88■□□□□ 0.29
PRKCSH-216ENST00000592445 LRRC74BQ6ZQY2 392 aa16.88■□□□□ 0.29
PRKCSH-216ENST00000592445 RNF130Q86XS8 419 aa16.88■□□□□ 0.29
PRKCSH-216ENST00000592445 CCDC36Q8IYA8 594 aa16.88■□□□□ 0.29
PRKCSH-216ENST00000592445 EPS8L3Q8TE67 593 aaKnown RBP16.88■□□□□ 0.29
PRKCSH-216ENST00000592445 SYT3Q9BQG1 590 aa16.88■□□□□ 0.29
PRKCSH-216ENST00000592445 PPCSQ9HAB8 311 aa16.88■□□□□ 0.29
PRKCSH-216ENST00000592445 GPR35Q9HC97 309 aa16.88■□□□□ 0.29
PRKCSH-216ENST00000592445 RLIMQ9NVW2 624 aa16.88■□□□□ 0.29
PRKCSH-216ENST00000592445 ASIC5Q9NY37 505 aa16.88■□□□□ 0.29
PRKCSH-216ENST00000592445 PCDHGB1Q9Y5G3 927 aa16.88■□□□□ 0.29
PRKCSH-216ENST00000592445 NOX1Q9Y5S8 564 aa16.88■□□□□ 0.29
PRKCSH-216ENST00000592445 TFPTP0C1Z6 253 aa16.87■□□□□ 0.29
PRKCSH-216ENST00000592445 NR2F1P10589 423 aa16.87■□□□□ 0.29
PRKCSH-216ENST00000592445 ZNF43P17038 809 aa16.87■□□□□ 0.29
PRKCSH-216ENST00000592445 GTF2E2P29084 291 aaKnown RBP16.87■□□□□ 0.29
PRKCSH-216ENST00000592445 SERPINB5P36952 375 aa16.87■□□□□ 0.29
PRKCSH-216ENST00000592445 ALDH3B1P43353 468 aa16.87■□□□□ 0.29
PRKCSH-216ENST00000592445 MYBPC1Q00872 1141 aa16.87■□□□□ 0.29
PRKCSH-216ENST00000592445 CEACAM16Q2WEN9 425 aa16.87■□□□□ 0.29
PRKCSH-216ENST00000592445 PDLIM3Q53GG5 364 aaPredicted RBP16.87■□□□□ 0.29
PRKCSH-216ENST00000592445 PEX5LQ8IYB4 626 aa16.87■□□□□ 0.29
PRKCSH-216ENST00000592445 UBLCP1Q8WVY7 318 aaPredicted RBP16.87■□□□□ 0.29
PRKCSH-216ENST00000592445 SLC25A36Q96CQ1 311 aa16.87■□□□□ 0.29
PRKCSH-216ENST00000592445 APOPT1Q96IL0 206 aa16.87■□□□□ 0.29
PRKCSH-216ENST00000592445 ZNF275Q9NSD4 429 aaPredicted RBP16.87■□□□□ 0.29
PRKCSH-216ENST00000592445 RCE1Q9Y256 329 aa16.87■□□□□ 0.29
PRKCSH-216ENST00000592445 TMPRSS2O15393 492 aa16.86■□□□□ 0.29
PRKCSH-216ENST00000592445 SEC14L2O76054 403 aa16.86■□□□□ 0.29
PRKCSH-216ENST00000592445 AHSA1O95433 338 aa16.86■□□□□ 0.29
PRKCSH-216ENST00000592445 BCL10O95999 233 aa16.86■□□□□ 0.29
PRKCSH-216ENST00000592445 C1QCP02747 245 aa16.86■□□□□ 0.29
PRKCSH-216ENST00000592445 ANPEPP15144 967 aa16.86■□□□□ 0.29
PRKCSH-216ENST00000592445 NCF2P19878 526 aaPredicted RBP16.86■□□□□ 0.29
PRKCSH-216ENST00000592445 RPS4Y1P22090 263 aaKnown RBP16.86■□□□□ 0.29
PRKCSH-216ENST00000592445 ARRB2P32121 409 aa16.86■□□□□ 0.29
PRKCSH-216ENST00000592445 ANXA11P50995 505 aaKnown RBP16.86■□□□□ 0.29
PRKCSH-216ENST00000592445 GKAP1Q5VSY0 366 aaPredicted RBP16.86■□□□□ 0.29
PRKCSH-216ENST00000592445 C1orf229Q6ZS94 237 aaPredicted RBP16.86■□□□□ 0.29
PRKCSH-216ENST00000592445 YIPF5Q969M3 257 aa16.86■□□□□ 0.29
PRKCSH-216ENST00000592445 ZNF837Q96EG3 531 aaPredicted RBP16.86■□□□□ 0.29
PRKCSH-216ENST00000592445 PPP1R36Q96LQ0 422 aa16.86■□□□□ 0.29
PRKCSH-216ENST00000592445 ZNF696Q9H7X3 374 aa16.86■□□□□ 0.29
PRKCSH-216ENST00000592445 SLC52A3Q9NQ40 469 aa16.86■□□□□ 0.29
PRKCSH-216ENST00000592445 A0A096LPI6 279 aa16.85■□□□□ 0.29
PRKCSH-216ENST00000592445 CDHR4A6H8M9 788 aa16.85■□□□□ 0.29
PRKCSH-216ENST00000592445 ZNF432O94892 652 aa16.85■□□□□ 0.29
PRKCSH-216ENST00000592445 AVPP01185 164 aa16.85■□□□□ 0.29
PRKCSH-216ENST00000592445 HLA-HP01893 362 aa16.85■□□□□ 0.29
PRKCSH-216ENST00000592445 GSNP06396 782 aa16.85■□□□□ 0.29
PRKCSH-216ENST00000592445 PNMTP11086 282 aa16.85■□□□□ 0.29
PRKCSH-216ENST00000592445 CD79AP11912 226 aa16.85■□□□□ 0.29
PRKCSH-216ENST00000592445 SEC24CP53992 1094 aa16.85■□□□□ 0.29
PRKCSH-216ENST00000592445 LMO4P61968 165 aa16.85■□□□□ 0.29
PRKCSH-216ENST00000592445 C1DQ13901 141 aaKnown RBP16.85■□□□□ 0.29
PRKCSH-216ENST00000592445 CASP8Q14790 479 aa16.85■□□□□ 0.29
PRKCSH-216ENST00000592445 MAD2L1BPQ15013 274 aaPredicted RBP16.85■□□□□ 0.29
PRKCSH-216ENST00000592445 MSMPQ1L6U9 139 aa16.85■□□□□ 0.29
PRKCSH-216ENST00000592445 SMU1Q2TAY7 513 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms