RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 OPALINQ96PE5 141 aa17.92■□□□□ 0.46
TRIM47-204ENST00000587339 HAO2Q9NYQ3 351 aa17.92■□□□□ 0.46
TRIM47-204ENST00000587339 ZNF292O60281 2723 aa17.92■□□□□ 0.46
TRIM47-204ENST00000587339 DMXL1Q9Y485 3027 aa17.92■□□□□ 0.46
TRIM47-204ENST00000587339 OR6C68A6NDL8 312 aa17.92■□□□□ 0.46
TRIM47-204ENST00000587339 FTCDNL1E5RQL4 147 aa17.92■□□□□ 0.46
TRIM47-204ENST00000587339 C11orf98E9PRG8 122 aa17.92■□□□□ 0.46
TRIM47-204ENST00000587339 J3QRE1 110 aa17.92■□□□□ 0.46
TRIM47-204ENST00000587339 RNF13O43567 381 aa17.92■□□□□ 0.46
TRIM47-204ENST00000587339 AIREO43918 545 aa17.92■□□□□ 0.46
TRIM47-204ENST00000587339 DXOO77932 396 aaKnown RBP17.92■□□□□ 0.46
TRIM47-204ENST00000587339 SNX4O95219 450 aa17.92■□□□□ 0.46
TRIM47-204ENST00000587339 OR6A2O95222 327 aa17.92■□□□□ 0.46
TRIM47-204ENST00000587339 TXNDC12O95881 172 aa17.92■□□□□ 0.46
TRIM47-204ENST00000587339 TFPIP10646 304 aa17.92■□□□□ 0.46
TRIM47-204ENST00000587339 ZNF182P17025 639 aaPredicted RBP17.92■□□□□ 0.46
TRIM47-204ENST00000587339 IL11P20809 199 aa17.92■□□□□ 0.46
TRIM47-204ENST00000587339 EIF1P41567 113 aaKnown RBP17.92■□□□□ 0.46
TRIM47-204ENST00000587339 MFSD13AQ14CX5 517 aa17.92■□□□□ 0.46
TRIM47-204ENST00000587339 SPCS2Q15005 226 aa17.92■□□□□ 0.46
TRIM47-204ENST00000587339 LEG1Q6P5S2 330 aa17.92■□□□□ 0.46
TRIM47-204ENST00000587339 MFSD8Q8NHS3 518 aa17.92■□□□□ 0.46
TRIM47-204ENST00000587339 ZNF417Q8TAU3 575 aa17.92■□□□□ 0.46
TRIM47-204ENST00000587339 RPL3LQ92901 407 aaKnown RBP17.92■□□□□ 0.46
TRIM47-204ENST00000587339 KIAA1143Q96AT1 154 aaPredicted RBP17.92■□□□□ 0.46
TRIM47-204ENST00000587339 ZNF587Q96SQ5 575 aaPredicted RBP17.92■□□□□ 0.46
TRIM47-204ENST00000587339 DDOQ99489 341 aa17.92■□□□□ 0.46
TRIM47-204ENST00000587339 JAM3Q9BX67 310 aa17.92■□□□□ 0.46
TRIM47-204ENST00000587339 ERVK13-1Q9NX77 482 aa17.92■□□□□ 0.46
TRIM47-204ENST00000587339 TEKT2Q9UIF3 430 aa17.92■□□□□ 0.46
TRIM47-204ENST00000587339 C12orf71A8MTZ7 269 aa17.91■□□□□ 0.46
TRIM47-204ENST00000587339 G3V3Y1 287 aa17.91■□□□□ 0.46
TRIM47-204ENST00000587339 GADD45AP24522 165 aa17.91■□□□□ 0.46
TRIM47-204ENST00000587339 ADH6P28332 368 aa17.91■□□□□ 0.46
TRIM47-204ENST00000587339 GTF2E2P29084 291 aaKnown RBP17.91■□□□□ 0.46
TRIM47-204ENST00000587339 CDKN2AP42771 156 aaKnown RBP17.91■□□□□ 0.46
TRIM47-204ENST00000587339 VBP1P61758 197 aa17.91■□□□□ 0.46
TRIM47-204ENST00000587339 LGALS3BPQ08380 585 aa17.91■□□□□ 0.46
TRIM47-204ENST00000587339 MLLT11Q13015 90 aaPredicted RBP17.91■□□□□ 0.46
TRIM47-204ENST00000587339 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.91■□□□□ 0.46
TRIM47-204ENST00000587339 GPR139Q6DWJ6 353 aa17.91■□□□□ 0.46
TRIM47-204ENST00000587339 C3orf33Q6P1S2 294 aa17.91■□□□□ 0.46
TRIM47-204ENST00000587339 BEST3Q8N1M1 668 aa17.91■□□□□ 0.46
TRIM47-204ENST00000587339 GALNT15Q8N3T1 639 aa17.91■□□□□ 0.46
TRIM47-204ENST00000587339 ACBD7Q8N6N7 88 aa17.91■□□□□ 0.46
TRIM47-204ENST00000587339 OR1J4Q8NGS1 313 aa17.91■□□□□ 0.46
TRIM47-204ENST00000587339 ZBTB8AQ96BR9 441 aa17.91■□□□□ 0.46
TRIM47-204ENST00000587339 NTNG2Q96CW9 530 aa17.91■□□□□ 0.46
TRIM47-204ENST00000587339 JSRP1Q96MG2 331 aaPredicted RBP17.91■□□□□ 0.46
TRIM47-204ENST00000587339 GNRHR2Q96P88 292 aa17.91■□□□□ 0.46
TRIM47-204ENST00000587339 TSPAN32Q96QS1 320 aa17.91■□□□□ 0.46
TRIM47-204ENST00000587339 MRPL39Q9NYK5 338 aaKnown RBP17.91■□□□□ 0.46
TRIM47-204ENST00000587339 STMN3Q9NZ72 180 aa17.91■□□□□ 0.46
TRIM47-204ENST00000587339 CORINQ9Y5Q5 1042 aa17.91■□□□□ 0.46
TRIM47-204ENST00000587339 SPIN1Q9Y657 262 aaPredicted RBP17.91■□□□□ 0.46
TRIM47-204ENST00000587339 ZFHX2Q9C0A1 2572 aaPredicted RBP17.91■□□□□ 0.46
TRIM47-204ENST00000587339 TM4SF5O14894 197 aa17.9■□□□□ 0.46
TRIM47-204ENST00000587339 SNPHO15079 494 aa17.9■□□□□ 0.46
TRIM47-204ENST00000587339 EFNA2O43921 213 aa17.9■□□□□ 0.46
TRIM47-204ENST00000587339 P04436 131 aa17.9■□□□□ 0.46
TRIM47-204ENST00000587339 SBK2P0C263 348 aa17.9■□□□□ 0.46
TRIM47-204ENST00000587339 CYB561P49447 251 aa17.9■□□□□ 0.46
TRIM47-204ENST00000587339 CLK1P49759 484 aaKnown RBP17.9■□□□□ 0.46
TRIM47-204ENST00000587339 NOVA1P51513 510 aaKnown RBP17.9■□□□□ 0.46
TRIM47-204ENST00000587339 POU4F2Q12837 409 aa17.9■□□□□ 0.46
TRIM47-204ENST00000587339 PON3Q15166 354 aa17.9■□□□□ 0.46
TRIM47-204ENST00000587339 OR7A5Q15622 319 aa17.9■□□□□ 0.46
TRIM47-204ENST00000587339 ZPLD1Q8TCW7 415 aa17.9■□□□□ 0.46
TRIM47-204ENST00000587339 GATAD2BQ8WXI9 593 aa17.9■□□□□ 0.46
TRIM47-204ENST00000587339 POTEKPQ9BYX7 375 aa17.9■□□□□ 0.46
TRIM47-204ENST00000587339 INIPQ9NRY2 104 aa17.9■□□□□ 0.46
TRIM47-204ENST00000587339 ASB6Q9NWX5 421 aa17.9■□□□□ 0.46
TRIM47-204ENST00000587339 ZNF346Q9UL40 294 aaKnown RBP17.9■□□□□ 0.46
TRIM47-204ENST00000587339 A0A087WZY1 265 aa17.9■□□□□ 0.46
TRIM47-204ENST00000587339 PLPP3O14495 311 aa17.9■□□□□ 0.46
TRIM47-204ENST00000587339 BCL10O95999 233 aa17.9■□□□□ 0.46
TRIM47-204ENST00000587339 MRPL3P09001 348 aaKnown RBP17.9■□□□□ 0.46
TRIM47-204ENST00000587339 LIFP15018 202 aa17.9■□□□□ 0.46
TRIM47-204ENST00000587339 IDUAP35475 653 aa17.9■□□□□ 0.46
TRIM47-204ENST00000587339 NCS1P62166 190 aa17.9■□□□□ 0.46
TRIM47-204ENST00000587339 KRR1Q13601 381 aaKnown RBP17.9■□□□□ 0.46
TRIM47-204ENST00000587339 TGIF1Q15583 401 aa17.9■□□□□ 0.46
TRIM47-204ENST00000587339 SSX1Q16384 188 aa17.9■□□□□ 0.46
TRIM47-204ENST00000587339 KLHL36Q8N4N3 616 aa17.9■□□□□ 0.46
TRIM47-204ENST00000587339 OR51L1Q8NGJ5 315 aa17.9■□□□□ 0.46
TRIM47-204ENST00000587339 OR5M1Q8NGP8 315 aa17.9■□□□□ 0.46
TRIM47-204ENST00000587339 ZNF649Q9BS31 505 aa17.9■□□□□ 0.46
TRIM47-204ENST00000587339 NMNAT2Q9BZQ4 307 aa17.9■□□□□ 0.46
TRIM47-204ENST00000587339 ADGRL4Q9HBW9 690 aa17.9■□□□□ 0.46
TRIM47-204ENST00000587339 ASCL3Q9NQ33 180 aa17.9■□□□□ 0.46
TRIM47-204ENST00000587339 SPI1P17947 270 aa17.89■□□□□ 0.45
TRIM47-204ENST00000587339 ITGA3P26006 1051 aa17.89■□□□□ 0.45
TRIM47-204ENST00000587339 DPP4P27487 766 aa17.89■□□□□ 0.45
TRIM47-204ENST00000587339 DSCR4P56555 118 aaPredicted RBP17.89■□□□□ 0.45
TRIM47-204ENST00000587339 FOXK1P85037 733 aa17.89■□□□□ 0.45
TRIM47-204ENST00000587339 OC90Q02509 493 aaPredicted RBP17.89■□□□□ 0.45
TRIM47-204ENST00000587339 AIMP2Q13155 320 aaKnown RBP17.89■□□□□ 0.45
TRIM47-204ENST00000587339 MESTQ5EB52 335 aa17.89■□□□□ 0.45
TRIM47-204ENST00000587339 LCN1P1Q5VSP4 162 aa17.89■□□□□ 0.45
TRIM47-204ENST00000587339 TIGD3Q6B0B8 471 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms