RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 KLF10Q13118 480 aa15.52■□□□□ 0.08
TPM4-206ENST00000587201 C1DQ13901 141 aaKnown RBP15.52■□□□□ 0.08
TPM4-206ENST00000587201 PGGHGQ32M88 737 aa15.52■□□□□ 0.08
TPM4-206ENST00000587201 INTS11Q5TA45 600 aaKnown RBP15.52■□□□□ 0.08
TPM4-206ENST00000587201 NANOGP8Q6NSW7 305 aa15.52■□□□□ 0.08
TPM4-206ENST00000587201 SLC22A25Q6T423 547 aa15.52■□□□□ 0.08
TPM4-206ENST00000587201 KLHL24Q6TFL4 600 aa15.52■□□□□ 0.08
TPM4-206ENST00000587201 PATL1Q86TB9 770 aaKnown RBP15.52■□□□□ 0.08
TPM4-206ENST00000587201 DEPDC4Q8N2C3 294 aa15.52■□□□□ 0.08
TPM4-206ENST00000587201 SLC26A7Q8TE54 656 aa15.52■□□□□ 0.08
TPM4-206ENST00000587201 TRMT61AQ96FX7 289 aaKnown RBP15.52■□□□□ 0.08
TPM4-206ENST00000587201 OXGR1Q96P68 337 aa15.52■□□□□ 0.08
TPM4-206ENST00000587201 ALKBH3Q96Q83 286 aaPredicted RBP15.52■□□□□ 0.08
TPM4-206ENST00000587201 EPYCQ99645 322 aa15.52■□□□□ 0.08
TPM4-206ENST00000587201 MCHR1Q99705 422 aa15.52■□□□□ 0.08
TPM4-206ENST00000587201 ARHGDIGQ99819 225 aa15.52■□□□□ 0.08
TPM4-206ENST00000587201 SMR3AQ99954 134 aa15.52■□□□□ 0.08
TPM4-206ENST00000587201 BDH2Q9BUT1 245 aa15.52■□□□□ 0.08
TPM4-206ENST00000587201 ALG2Q9H553 416 aa15.52■□□□□ 0.08
TPM4-206ENST00000587201 NANOGQ9H9S0 305 aa15.52■□□□□ 0.08
TPM4-206ENST00000587201 FAIMQ9NVQ4 179 aa15.52■□□□□ 0.08
TPM4-206ENST00000587201 KLHL14Q9P2G3 628 aa15.52■□□□□ 0.08
TPM4-206ENST00000587201 B3GALT5Q9Y2C3 310 aa15.52■□□□□ 0.08
TPM4-206ENST00000587201 H7C1Q1 480 aa15.51■□□□□ 0.07
TPM4-206ENST00000587201 FZD7O75084 574 aa15.51■□□□□ 0.07
TPM4-206ENST00000587201 UPK3AO75631 287 aa15.51■□□□□ 0.07
TPM4-206ENST00000587201 WNT11O96014 354 aa15.51■□□□□ 0.07
TPM4-206ENST00000587201 C8BP07358 591 aa15.51■□□□□ 0.07
TPM4-206ENST00000587201 PTNP21246 168 aa15.51■□□□□ 0.07
TPM4-206ENST00000587201 CDKN1AP38936 164 aa15.51■□□□□ 0.07
TPM4-206ENST00000587201 CDH12P55289 794 aa15.51■□□□□ 0.07
TPM4-206ENST00000587201 PRPS1P60891 318 aa15.51■□□□□ 0.07
TPM4-206ENST00000587201 SLC25A3Q00325 362 aa15.51■□□□□ 0.07
TPM4-206ENST00000587201 LGALS3BPQ08380 585 aa15.51■□□□□ 0.07
TPM4-206ENST00000587201 SPOCK1Q08629 439 aa15.51■□□□□ 0.07
TPM4-206ENST00000587201 MFSD13AQ14CX5 517 aa15.51■□□□□ 0.07
TPM4-206ENST00000587201 MAPRE2Q15555 327 aa15.51■□□□□ 0.07
TPM4-206ENST00000587201 NRF1Q16656 503 aa15.51■□□□□ 0.07
TPM4-206ENST00000587201 VMACQ2NL98 169 aa15.51■□□□□ 0.07
TPM4-206ENST00000587201 HIKESHIQ53FT3 197 aa15.51■□□□□ 0.07
TPM4-206ENST00000587201 REP15Q6BDI9 236 aa15.51■□□□□ 0.07
TPM4-206ENST00000587201 H1FNTQ75WM6 255 aaPredicted RBP15.51■□□□□ 0.07
TPM4-206ENST00000587201 GPR32P1Q8NGA4 272 aa15.51■□□□□ 0.07
TPM4-206ENST00000587201 LRRC58Q96CX6 371 aa15.51■□□□□ 0.07
TPM4-206ENST00000587201 SH3GL1Q99961 368 aa15.51■□□□□ 0.07
TPM4-206ENST00000587201 ECSITQ9BQ95 431 aa15.51■□□□□ 0.07
TPM4-206ENST00000587201 SAR1AQ9NR31 198 aa15.51■□□□□ 0.07
TPM4-206ENST00000587201 B3GAT1Q9P2W7 334 aa15.51■□□□□ 0.07
TPM4-206ENST00000587201 CADP27708 2225 aa15.51■□□□□ 0.07
TPM4-206ENST00000587201 USF3Q68DE3 2245 aa15.51■□□□□ 0.07
TPM4-206ENST00000587201 LOC100653049A0A140TA62 436 aa15.5■□□□□ 0.07
TPM4-206ENST00000587201 TRIM64A6NGJ6 449 aa15.5■□□□□ 0.07
TPM4-206ENST00000587201 TRIM64BA6NI03 449 aa15.5■□□□□ 0.07
TPM4-206ENST00000587201 CPSF4LA6NMK7 179 aaKnown RBP15.5■□□□□ 0.07
TPM4-206ENST00000587201 BBIP1A8MTZ0 92 aa15.5■□□□□ 0.07
TPM4-206ENST00000587201 OVOL3O00110 214 aa15.5■□□□□ 0.07
TPM4-206ENST00000587201 MRASO14807 208 aa15.5■□□□□ 0.07
TPM4-206ENST00000587201 SMAD7O15105 426 aaKnown RBP15.5■□□□□ 0.07
TPM4-206ENST00000587201 FMO6PO60774 539 aa15.5■□□□□ 0.07
TPM4-206ENST00000587201 KRT34O76011 436 aa15.5■□□□□ 0.07
TPM4-206ENST00000587201 NQO1P15559 274 aaKnown RBP15.5■□□□□ 0.07
TPM4-206ENST00000587201 GZMMP51124 257 aa15.5■□□□□ 0.07
TPM4-206ENST00000587201 RABL3Q5HYI8 236 aa15.5■□□□□ 0.07
TPM4-206ENST00000587201 COQ5Q5HYK3 327 aa15.5■□□□□ 0.07
TPM4-206ENST00000587201 ENTPD8Q5MY95 495 aa15.5■□□□□ 0.07
TPM4-206ENST00000587201 SWT1Q5T5J6 900 aaKnown RBP15.5■□□□□ 0.07
TPM4-206ENST00000587201 ZNF613Q6PF04 617 aa15.5■□□□□ 0.07
TPM4-206ENST00000587201 CIARTQ8N365 385 aaPredicted RBP15.5■□□□□ 0.07
TPM4-206ENST00000587201 C10orf53Q8N6V4 93 aa15.5■□□□□ 0.07
TPM4-206ENST00000587201 OR6T1Q8NGN1 323 aa15.5■□□□□ 0.07
TPM4-206ENST00000587201 OR1K1Q8NGR3 316 aa15.5■□□□□ 0.07
TPM4-206ENST00000587201 OR6S1Q8NH40 331 aa15.5■□□□□ 0.07
TPM4-206ENST00000587201 VANGL1Q8TAA9 524 aaPredicted RBP15.5■□□□□ 0.07
TPM4-206ENST00000587201 ASPNQ9BXN1 380 aa15.5■□□□□ 0.07
TPM4-206ENST00000587201 LINC00470Q9BZP3 86 aa15.5■□□□□ 0.07
TPM4-206ENST00000587201 RCE1Q9Y256 329 aa15.5■□□□□ 0.07
TPM4-206ENST00000587201 E7EQL1 145 aa15.49■□□□□ 0.07
TPM4-206ENST00000587201 AKAP8O43823 692 aaKnown RBP15.49■□□□□ 0.07
TPM4-206ENST00000587201 SLC43A1O75387 559 aa15.49■□□□□ 0.07
TPM4-206ENST00000587201 BGLAPP02818 100 aa15.49■□□□□ 0.07
TPM4-206ENST00000587201 CD247P20963 164 aa15.49■□□□□ 0.07
TPM4-206ENST00000587201 LTBQ06643 244 aa15.49■□□□□ 0.07
TPM4-206ENST00000587201 NPTX1Q15818 432 aa15.49■□□□□ 0.07
TPM4-206ENST00000587201 TBRG1Q3YBR2 411 aa15.49■□□□□ 0.07
TPM4-206ENST00000587201 C1QTNF12Q5T7M4 302 aa15.49■□□□□ 0.07
TPM4-206ENST00000587201 AGAP6Q5VW22 663 aa15.49■□□□□ 0.07
TPM4-206ENST00000587201 HMBOX1Q6NT76 420 aa15.49■□□□□ 0.07
TPM4-206ENST00000587201 CLEC9AQ6UXN8 241 aa15.49■□□□□ 0.07
TPM4-206ENST00000587201 Q71RC1 249 aaPredicted RBP15.49■□□□□ 0.07
TPM4-206ENST00000587201 LINGO2Q7L985 606 aa15.49■□□□□ 0.07
TPM4-206ENST00000587201 SNX32Q86XE0 403 aa15.49■□□□□ 0.07
TPM4-206ENST00000587201 RBM45Q8IUH3 476 aaKnown RBP15.49■□□□□ 0.07
TPM4-206ENST00000587201 ADPRHL1Q8NDY3 354 aa15.49■□□□□ 0.07
TPM4-206ENST00000587201 OR8J3Q8NGG0 315 aa15.49■□□□□ 0.07
TPM4-206ENST00000587201 RASSF5Q8WWW0 418 aa15.49■□□□□ 0.07
TPM4-206ENST00000587201 TAMM41Q96BW9 452 aa15.49■□□□□ 0.07
TPM4-206ENST00000587201 COX4I2Q96KJ9 171 aa15.49■□□□□ 0.07
TPM4-206ENST00000587201 TMEM43Q9BTV4 400 aa15.49■□□□□ 0.07
TPM4-206ENST00000587201 TRAF4Q9BUZ4 470 aaPredicted RBP15.49■□□□□ 0.07
TPM4-206ENST00000587201 CCDC134Q9H6E4 229 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms