RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 COMPP49747 757 aaPredicted RBP10.24□□□□□ -0.77
BRCA1-225ENST00000586385 NME5P56597 212 aa10.24□□□□□ -0.77
BRCA1-225ENST00000586385 UFM1P61960 85 aa10.24□□□□□ -0.77
BRCA1-225ENST00000586385 ELFN2Q5R3F8 820 aa10.24□□□□□ -0.77
BRCA1-225ENST00000586385 PHYHD1Q5SRE7 291 aa10.24□□□□□ -0.77
BRCA1-225ENST00000586385 PRAMEF8Q5VWM4 474 aa10.24□□□□□ -0.77
BRCA1-225ENST00000586385 PRAMEF7Q5VXH5 474 aa10.24□□□□□ -0.77
BRCA1-225ENST00000586385 C1orf229Q6ZS94 237 aaPredicted RBP10.24□□□□□ -0.77
BRCA1-225ENST00000586385 MDP1Q86V88 176 aa10.24□□□□□ -0.77
BRCA1-225ENST00000586385 CADM2Q8N3J6 435 aa10.24□□□□□ -0.77
BRCA1-225ENST00000586385 VPS37AQ8NEZ2 397 aa10.24□□□□□ -0.77
BRCA1-225ENST00000586385 CLDND2Q8NHS1 167 aa10.24□□□□□ -0.77
BRCA1-225ENST00000586385 MRPL37Q9BZE1 423 aaKnown RBP10.24□□□□□ -0.77
BRCA1-225ENST00000586385 METTL17Q9H7H0 456 aaPredicted RBP10.24□□□□□ -0.77
BRCA1-225ENST00000586385 GPR35Q9HC97 309 aa10.24□□□□□ -0.77
BRCA1-225ENST00000586385 B3GNT2Q9NY97 397 aa10.24□□□□□ -0.77
BRCA1-225ENST00000586385 RASD1Q9Y272 281 aa10.24□□□□□ -0.77
BRCA1-225ENST00000586385 RGS9O75916 674 aaPredicted RBP10.23□□□□□ -0.77
BRCA1-225ENST00000586385 VAMP5O95183 116 aa10.23□□□□□ -0.77
BRCA1-225ENST00000586385 HPXP02790 462 aa10.23□□□□□ -0.77
BRCA1-225ENST00000586385 NR2F1P10589 423 aa10.23□□□□□ -0.77
BRCA1-225ENST00000586385 PAX7P23759 505 aa10.23□□□□□ -0.77
BRCA1-225ENST00000586385 COL8A2P25067 703 aa10.23□□□□□ -0.77
BRCA1-225ENST00000586385 S100A3P33764 101 aa10.23□□□□□ -0.77
BRCA1-225ENST00000586385 SH3BGRP55822 239 aaPredicted RBP10.23□□□□□ -0.77
BRCA1-225ENST00000586385 CLDN17P56750 224 aa10.23□□□□□ -0.77
BRCA1-225ENST00000586385 HOXC5Q00444 222 aa10.23□□□□□ -0.77
BRCA1-225ENST00000586385 IL1RL1Q01638 556 aa10.23□□□□□ -0.77
BRCA1-225ENST00000586385 POU3F1Q03052 451 aaPredicted RBP10.23□□□□□ -0.77
BRCA1-225ENST00000586385 NPRL3Q12980 569 aa10.23□□□□□ -0.77
BRCA1-225ENST00000586385 SNTB2Q13425 540 aaKnown RBP10.23□□□□□ -0.77
BRCA1-225ENST00000586385 RPS26P11Q5JNZ5 115 aaPredicted RBP10.23□□□□□ -0.77
BRCA1-225ENST00000586385 WBP2NLQ6ICG8 309 aa10.23□□□□□ -0.77
BRCA1-225ENST00000586385 SERPINA11Q86U17 422 aa10.23□□□□□ -0.77
BRCA1-225ENST00000586385 ZNF440Q8IYI8 595 aa10.23□□□□□ -0.77
BRCA1-225ENST00000586385 TMEM123Q8N131 208 aa10.23□□□□□ -0.77
BRCA1-225ENST00000586385 RIBC1Q8N443 379 aaPredicted RBP10.23□□□□□ -0.77
BRCA1-225ENST00000586385 ANKK1Q8NFD2 765 aa10.23□□□□□ -0.77
BRCA1-225ENST00000586385 OR52P1PQ8NH57 321 aa10.23□□□□□ -0.77
BRCA1-225ENST00000586385 MFSD8Q8NHS3 518 aa10.23□□□□□ -0.77
BRCA1-225ENST00000586385 ZFAND2BQ8WV99 257 aa10.23□□□□□ -0.77
BRCA1-225ENST00000586385 YIPF5Q969M3 257 aa10.23□□□□□ -0.77
BRCA1-225ENST00000586385 KTI12Q96EK9 354 aaPredicted RBP10.23□□□□□ -0.77
BRCA1-225ENST00000586385 MS4A3Q96HJ5 214 aa10.23□□□□□ -0.77
BRCA1-225ENST00000586385 ANKRD27Q96NW4 1050 aa10.23□□□□□ -0.77
BRCA1-225ENST00000586385 TAPBPLQ9BX59 468 aa10.23□□□□□ -0.77
BRCA1-225ENST00000586385 OCEL1Q9H607 264 aa10.23□□□□□ -0.77
BRCA1-225ENST00000586385 MYEF2Q9P2K5 600 aaKnown RBP10.23□□□□□ -0.77
BRCA1-225ENST00000586385 METRNQ9UJH8 293 aa10.23□□□□□ -0.77
BRCA1-225ENST00000586385 HAO1Q9UJM8 370 aa10.23□□□□□ -0.77
BRCA1-225ENST00000586385 RCE1Q9Y256 329 aa10.23□□□□□ -0.77
BRCA1-225ENST00000586385 SPEF1Q9Y4P9 236 aa10.23□□□□□ -0.77
BRCA1-225ENST00000586385 A0A0A6YYJ9 748 aa10.22□□□□□ -0.77
BRCA1-225ENST00000586385 WDR91A4D1P6 747 aa10.22□□□□□ -0.77
BRCA1-225ENST00000586385 B4DSR2 109 aa10.22□□□□□ -0.77
BRCA1-225ENST00000586385 SLCO1B7G3V0H7 640 aa10.22□□□□□ -0.77
BRCA1-225ENST00000586385 TRAF3IP2O43734 574 aaPredicted RBP10.22□□□□□ -0.77
BRCA1-225ENST00000586385 NCR1O76036 304 aa10.22□□□□□ -0.77
BRCA1-225ENST00000586385 AVPP01185 164 aa10.22□□□□□ -0.77
BRCA1-225ENST00000586385 HLA-HP01893 362 aa10.22□□□□□ -0.77
BRCA1-225ENST00000586385 SERPINE1P05121 402 aa10.22□□□□□ -0.77
BRCA1-225ENST00000586385 UQCRBP14927 111 aa10.22□□□□□ -0.77
BRCA1-225ENST00000586385 LBPP18428 481 aa10.22□□□□□ -0.77
BRCA1-225ENST00000586385 NR4A1P22736 598 aa10.22□□□□□ -0.77
BRCA1-225ENST00000586385 SEC24CP53992 1094 aa10.22□□□□□ -0.77
BRCA1-225ENST00000586385 CLNS1AP54105 237 aaKnown RBP10.22□□□□□ -0.77
BRCA1-225ENST00000586385 ABCE1P61221 599 aaKnown RBP10.22□□□□□ -0.77
BRCA1-225ENST00000586385 DAG1Q14118 895 aa10.22□□□□□ -0.77
BRCA1-225ENST00000586385 CHI3L2Q15782 390 aa10.22□□□□□ -0.77
BRCA1-225ENST00000586385 DPY19L1Q2PZI1 675 aa10.22□□□□□ -0.77
BRCA1-225ENST00000586385 CEACAM16Q2WEN9 425 aa10.22□□□□□ -0.77
BRCA1-225ENST00000586385 LIN52Q52LA3 116 aa10.22□□□□□ -0.77
BRCA1-225ENST00000586385 RNF220Q5VTB9 566 aa10.22□□□□□ -0.77
BRCA1-225ENST00000586385 KRT80Q6KB66 452 aa10.22□□□□□ -0.77
BRCA1-225ENST00000586385 OGFOD2Q6N063 350 aa10.22□□□□□ -0.77
BRCA1-225ENST00000586385 NHLRC1Q6VVB1 395 aa10.22□□□□□ -0.77
BRCA1-225ENST00000586385 ZNF621Q6ZSS3 439 aa10.22□□□□□ -0.77
BRCA1-225ENST00000586385 LRP11Q86VZ4 500 aa10.22□□□□□ -0.77
BRCA1-225ENST00000586385 NUDCD3Q8IVD9 361 aa10.22□□□□□ -0.77
BRCA1-225ENST00000586385 PEX5LQ8IYB4 626 aa10.22□□□□□ -0.77
BRCA1-225ENST00000586385 KIF18AQ8NI77 898 aa10.22□□□□□ -0.77
BRCA1-225ENST00000586385 STK35Q8TDR2 534 aa10.22□□□□□ -0.77
BRCA1-225ENST00000586385 MRPL24Q96A35 216 aaKnown RBP10.22□□□□□ -0.77
BRCA1-225ENST00000586385 OR2M2Q96R28 347 aa10.22□□□□□ -0.77
BRCA1-225ENST00000586385 PANX1Q96RD7 426 aa10.22□□□□□ -0.77
BRCA1-225ENST00000586385 NUF2Q9BZD4 464 aa10.22□□□□□ -0.77
BRCA1-225ENST00000586385 NARFLQ9H6Q4 476 aa10.22□□□□□ -0.77
BRCA1-225ENST00000586385 MEAF6Q9HAF1 191 aa10.22□□□□□ -0.77
BRCA1-225ENST00000586385 LPAR2Q9HBW0 351 aa10.22□□□□□ -0.77
BRCA1-225ENST00000586385 CRLF2Q9HC73 371 aa10.22□□□□□ -0.77
BRCA1-225ENST00000586385 DYNLRB1Q9NP97 96 aa10.22□□□□□ -0.77
BRCA1-225ENST00000586385 AIG1Q9NVV5 245 aa10.22□□□□□ -0.77
BRCA1-225ENST00000586385 HIF1ANQ9NWT6 349 aa10.22□□□□□ -0.77
BRCA1-225ENST00000586385 ZNF224Q9NZL3 707 aa10.22□□□□□ -0.77
BRCA1-225ENST00000586385 FBXO9Q9UK97 447 aaPredicted RBP10.22□□□□□ -0.77
BRCA1-225ENST00000586385 ZNF443Q9Y2A4 671 aaPredicted RBP10.22□□□□□ -0.77
BRCA1-225ENST00000586385 RAP2CQ9Y3L5 183 aa10.22□□□□□ -0.77
BRCA1-225ENST00000586385 PCDHB14Q9Y5E9 798 aa10.22□□□□□ -0.77
BRCA1-225ENST00000586385 DYSFO75923 2080 aa10.21□□□□□ -0.77
BRCA1-225ENST00000586385 IGKV1D-42A0A075B6H8 117 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms